RNA–Protein interactions for RNA: ENST00000588738.5

ERCC1-207, Transcript of ERCC excision repair 1, endonuclease non-catalytic subunit, humanhuman

TSL 2

Gene ERCC1, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1-207ENST00000588738 ZBTB40Q9NUA8 1239 aa23.29■■□□□ 1.32
ERCC1-207ENST00000588738 AKAP2Q9Y2D5 859 aa23.29■■□□□ 1.32
ERCC1-207ENST00000588738 FAM205AQ6ZU69 1335 aa23.29■■□□□ 1.32
ERCC1-207ENST00000588738 TFCP2Q12800 502 aa23.28■■□□□ 1.32
ERCC1-207ENST00000588738 CEP85Q6P2H3 762 aa23.28■■□□□ 1.32
ERCC1-207ENST00000588738 MYOZ2Q9NPC6 264 aa23.28■■□□□ 1.32
ERCC1-207ENST00000588738 HDAC9Q9UKV0 1011 aa23.28■■□□□ 1.32
ERCC1-207ENST00000588738 PASKQ96RG2 1323 aa23.28■■□□□ 1.32
ERCC1-207ENST00000588738 KIAA0825Q8IV33 1275 aa23.27■■□□□ 1.32
ERCC1-207ENST00000588738 IQSEC3Q9UPP2 1182 aaPredicted RBP23.27■■□□□ 1.32
ERCC1-207ENST00000588738 JAG2Q9Y219 1238 aa23.27■■□□□ 1.32
ERCC1-207ENST00000588738 SURF6O75683 361 aaKnown RBP23.26■■□□□ 1.31
ERCC1-207ENST00000588738 CERS5Q8N5B7 392 aa23.26■■□□□ 1.31
ERCC1-207ENST00000588738 MYH13Q9UKX3 1938 aa23.25■■□□□ 1.31
ERCC1-207ENST00000588738 POLR2AP24928 1970 aaKnown RBP23.25■■□□□ 1.31
ERCC1-207ENST00000588738 OS9Q13438 667 aaPredicted RBP23.25■■□□□ 1.31
ERCC1-207ENST00000588738 RPAP2Q8IXW5 612 aaPredicted RBP23.25■■□□□ 1.31
ERCC1-207ENST00000588738 GNL3LQ9NVN8 582 aaKnown RBP23.25■■□□□ 1.31
ERCC1-207ENST00000588738 CEP350Q5VT06 3117 aa23.25■■□□□ 1.31
ERCC1-207ENST00000588738 TIMM10P62072 90 aa23.24■■□□□ 1.31
ERCC1-207ENST00000588738 SCARF1Q14162 830 aa23.24■■□□□ 1.31
ERCC1-207ENST00000588738 MFSD14BQ5SR56 506 aa23.24■■□□□ 1.31
ERCC1-207ENST00000588738 CDC37L1Q7L3B6 337 aa23.24■■□□□ 1.31
ERCC1-207ENST00000588738 DCPSQ96C86 337 aaKnown RBP23.24■■□□□ 1.31
ERCC1-207ENST00000588738 NOP58Q9Y2X3 529 aaKnown RBP23.24■■□□□ 1.31
ERCC1-207ENST00000588738 ARAP2Q8WZ64 1704 aa23.24■■□□□ 1.31
ERCC1-207ENST00000588738 A0A1B0GUL7 405 aa23.23■■□□□ 1.31
ERCC1-207ENST00000588738 RRP1P56182 461 aaKnown RBP23.23■■□□□ 1.31
ERCC1-207ENST00000588738 CHAF1AQ13111 956 aaPredicted RBP23.23■■□□□ 1.31
ERCC1-207ENST00000588738 TBC1D22AQ8WUA7 517 aa23.23■■□□□ 1.31
ERCC1-207ENST00000588738 F8W031 263 aaPredicted RBP23.22■■□□□ 1.31
ERCC1-207ENST00000588738 NEUROD6Q96NK8 337 aa23.22■■□□□ 1.31
ERCC1-207ENST00000588738 GLIS2Q9BZE0 524 aaPredicted RBP23.22■■□□□ 1.31
ERCC1-207ENST00000588738 TRPM7Q96QT4 1865 aa23.22■■□□□ 1.31
ERCC1-207ENST00000588738 HMMRO75330 724 aa23.21■■□□□ 1.31
ERCC1-207ENST00000588738 HTRA3P83110 453 aa23.21■■□□□ 1.31
ERCC1-207ENST00000588738 XAGE2Q96GT9 111 aa23.21■■□□□ 1.31
ERCC1-207ENST00000588738 CREBZFQ9NS37 354 aa23.21■■□□□ 1.31
ERCC1-207ENST00000588738 TMEM88BA6NKF7 163 aa23.2■■□□□ 1.3
ERCC1-207ENST00000588738 TRAF5O00463 557 aa23.2■■□□□ 1.3
ERCC1-207ENST00000588738 ADORA1P30542 326 aa23.2■■□□□ 1.3
ERCC1-207ENST00000588738 NBPF9Q3BBW0 867 aa23.2■■□□□ 1.3
ERCC1-207ENST00000588738 CCDC102BQ68D86 513 aa23.2■■□□□ 1.3
ERCC1-207ENST00000588738 KRT26Q7Z3Y9 468 aa23.2■■□□□ 1.3
ERCC1-207ENST00000588738 USP48Q86UV5 1035 aa23.2■■□□□ 1.3
ERCC1-207ENST00000588738 GPR108Q9NPR9 543 aa23.2■■□□□ 1.3
ERCC1-207ENST00000588738 GGA3Q9NZ52 723 aa23.2■■□□□ 1.3
ERCC1-207ENST00000588738 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.2■■□□□ 1.3
ERCC1-207ENST00000588738 ASTN2O75129 1339 aaPredicted RBP23.19■■□□□ 1.3
ERCC1-207ENST00000588738 WNT10BO00744 389 aa23.19■■□□□ 1.3
ERCC1-207ENST00000588738 SEMA3EO15041 775 aa23.19■■□□□ 1.3
ERCC1-207ENST00000588738 PHKA1P46020 1223 aa23.19■■□□□ 1.3
ERCC1-207ENST00000588738 DLGAP5Q15398 846 aa23.19■■□□□ 1.3
ERCC1-207ENST00000588738 GORABQ5T7V8 394 aa23.19■■□□□ 1.3
ERCC1-207ENST00000588738 ANGEL2Q5VTE6 544 aaKnown RBP23.19■■□□□ 1.3
ERCC1-207ENST00000588738 SULF1Q8IWU6 871 aa23.19■■□□□ 1.3
ERCC1-207ENST00000588738 WDR66Q8TBY9 1149 aa23.19■■□□□ 1.3
ERCC1-207ENST00000588738 TTF2Q9UNY4 1162 aaKnown RBP23.19■■□□□ 1.3
ERCC1-207ENST00000588738 PITPNM2Q9BZ72 1349 aa23.18■■□□□ 1.3
ERCC1-207ENST00000588738 FMR1Q06787 632 aaKnown RBP eCLIP23.18■■□□□ 1.3
ERCC1-207ENST00000588738 HSP90AB4PQ58FF6 505 aa23.18■■□□□ 1.3
ERCC1-207ENST00000588738 MTMR14Q8NCE2 650 aa23.18■■□□□ 1.3
ERCC1-207ENST00000588738 DENND2AQ9ULE3 1009 aa23.18■■□□□ 1.3
ERCC1-207ENST00000588738 ZBTB22O15209 634 aa23.17■■□□□ 1.3
ERCC1-207ENST00000588738 ERC1Q8IUD2 1116 aa23.17■■□□□ 1.3
ERCC1-207ENST00000588738 SIRT2Q8IXJ6 389 aa23.17■■□□□ 1.3
ERCC1-207ENST00000588738 EXOC6BQ9Y2D4 811 aa23.17■■□□□ 1.3
ERCC1-207ENST00000588738 SUGT1Q9Y2Z0 365 aa23.17■■□□□ 1.3
ERCC1-207ENST00000588738 RBM5P52756 815 aaKnown RBP eCLIP23.16■■□□□ 1.3
ERCC1-207ENST00000588738 CFAP100Q494V2 611 aa23.16■■□□□ 1.3
ERCC1-207ENST00000588738 TNNI3KQ59H18 835 aa23.16■■□□□ 1.3
ERCC1-207ENST00000588738 DNAJC5GQ8N7S2 189 aa23.16■■□□□ 1.3
ERCC1-207ENST00000588738 ZBED3Q96IU2 234 aaPredicted RBP23.16■■□□□ 1.3
ERCC1-207ENST00000588738 SERPINA10Q9UK55 444 aa23.16■■□□□ 1.3
ERCC1-207ENST00000588738 FPGT-TNNI3KV9GXZ4 949 aa23.16■■□□□ 1.3
ERCC1-207ENST00000588738 ECM29Q5VYK3 1845 aa23.15■■□□□ 1.3
ERCC1-207ENST00000588738 ADM5C9JUS6 153 aa23.14■■□□□ 1.29
ERCC1-207ENST00000588738 MYO1BO43795 1136 aa23.14■■□□□ 1.29
ERCC1-207ENST00000588738 CST9Q5W186 159 aa23.14■■□□□ 1.29
ERCC1-207ENST00000588738 MAST3O60307 1309 aa23.13■■□□□ 1.29
ERCC1-207ENST00000588738 COL1A1P02452 1464 aaPredicted RBP23.13■■□□□ 1.29
ERCC1-207ENST00000588738 SPDYE2BA6NHP3 402 aa23.13■■□□□ 1.29
ERCC1-207ENST00000588738 CELF2O95319 508 aaKnown RBP23.13■■□□□ 1.29
ERCC1-207ENST00000588738 SPDYE6P0CI01 402 aa23.13■■□□□ 1.29
ERCC1-207ENST00000588738 HDLBPQ00341 1268 aaKnown RBP23.13■■□□□ 1.29
ERCC1-207ENST00000588738 GRIK5Q16478 980 aa23.13■■□□□ 1.29
ERCC1-207ENST00000588738 PRMT6Q96LA8 375 aaPredicted RBP23.13■■□□□ 1.29
ERCC1-207ENST00000588738 ZNF408Q9H9D4 720 aa23.13■■□□□ 1.29
ERCC1-207ENST00000588738 PDS5AQ29RF7 1337 aaKnown RBP23.12■■□□□ 1.29
ERCC1-207ENST00000588738 CRKP46108 304 aa23.12■■□□□ 1.29
ERCC1-207ENST00000588738 RASGRF1Q13972 1273 aa23.12■■□□□ 1.29
ERCC1-207ENST00000588738 ZGPATQ8N5A5 531 aaKnown RBP23.12■■□□□ 1.29
ERCC1-207ENST00000588738 MRIQ9BWK5 157 aa23.12■■□□□ 1.29
ERCC1-207ENST00000588738 ABT1Q9ULW3 272 aaKnown RBP23.12■■□□□ 1.29
ERCC1-207ENST00000588738 SALL1Q9NSC2 1324 aa23.11■■□□□ 1.29
ERCC1-207ENST00000588738 UQCRFS1P1P0C7P4 283 aa23.11■■□□□ 1.29
ERCC1-207ENST00000588738 CCDC158Q5M9N0 1113 aa23.11■■□□□ 1.29
ERCC1-207ENST00000588738 DLK2Q6UY11 383 aa23.11■■□□□ 1.29
ERCC1-207ENST00000588738 APOBEC3FQ8IUX4 373 aaKnown RBP23.11■■□□□ 1.29
ERCC1-207ENST00000588738 TEKT1Q969V4 418 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms