RNA–Protein interactions for RNA: ENST00000588631.5

PIK3C3-209, Transcript of phosphatidylinositol 3-kinase catalytic subunit type 3, humanhuman

TSL 4

Gene PIK3C3, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIK3C3-209ENST00000588631 PBX4Q9BYU1 374 aa7.47□□□□□ -1.21
PIK3C3-209ENST00000588631 DCTN4Q9UJW0 460 aa7.47□□□□□ -1.21
PIK3C3-209ENST00000588631 ARID1BQ8NFD5 2236 aaPredicted RBP7.47□□□□□ -1.21
PIK3C3-209ENST00000588631 DDX3YO15523 660 aaKnown RBP7.46□□□□□ -1.22
PIK3C3-209ENST00000588631 MAPK1P28482 360 aa7.46□□□□□ -1.22
PIK3C3-209ENST00000588631 CEP120Q8N960 986 aa7.46□□□□□ -1.22
PIK3C3-209ENST00000588631 FAM83CQ9BQN1 747 aa7.46□□□□□ -1.22
PIK3C3-209ENST00000588631 ERCC3P19447 782 aa7.45□□□□□ -1.22
PIK3C3-209ENST00000588631 CDC25BP30305 580 aa7.45□□□□□ -1.22
PIK3C3-209ENST00000588631 ZAP70P43403 619 aa7.45□□□□□ -1.22
PIK3C3-209ENST00000588631 FAM117BQ6P1L5 589 aa7.45□□□□□ -1.22
PIK3C3-209ENST00000588631 ATCAYQ86WG3 371 aa7.45□□□□□ -1.22
PIK3C3-209ENST00000588631 SHKBP1Q8TBC3 707 aa7.45□□□□□ -1.22
PIK3C3-209ENST00000588631 ADAM19Q9H013 955 aa7.45□□□□□ -1.22
PIK3C3-209ENST00000588631 SEC31BQ9NQW1 1179 aa7.45□□□□□ -1.22
PIK3C3-209ENST00000588631 ABI2Q9NYB9 513 aaPredicted RBP7.45□□□□□ -1.22
PIK3C3-209ENST00000588631 FZD6O60353 706 aa7.44□□□□□ -1.22
PIK3C3-209ENST00000588631 CYP2E1P05181 493 aaPredicted RBP7.44□□□□□ -1.22
PIK3C3-209ENST00000588631 PTPRAP18433 802 aa7.44□□□□□ -1.22
PIK3C3-209ENST00000588631 PREPP48147 710 aa7.44□□□□□ -1.22
PIK3C3-209ENST00000588631 TTC39BQ5VTQ0 682 aaPredicted RBP7.44□□□□□ -1.22
PIK3C3-209ENST00000588631 ANKRD34AQ69YU3 496 aa7.44□□□□□ -1.22
PIK3C3-209ENST00000588631 WNT8BQ93098 351 aa7.44□□□□□ -1.22
PIK3C3-209ENST00000588631 KLHDC7BQ96G42 594 aa7.44□□□□□ -1.22
PIK3C3-209ENST00000588631 SH2B1Q9NRF2 756 aaPredicted RBP7.44□□□□□ -1.22
PIK3C3-209ENST00000588631 CCDC87Q9NVE4 849 aa7.44□□□□□ -1.22
PIK3C3-209ENST00000588631 ADGRE2Q9UHX3 823 aa7.44□□□□□ -1.22
PIK3C3-209ENST00000588631 BRPF3Q9ULD4 1205 aa7.44□□□□□ -1.22
PIK3C3-209ENST00000588631 FNDC3AQ9Y2H6 1198 aaKnown RBP7.44□□□□□ -1.22
PIK3C3-209ENST00000588631 HIF3AQ9Y2N7 669 aa7.44□□□□□ -1.22
PIK3C3-209ENST00000588631 ANKRD33BA6NCL7 494 aa7.43□□□□□ -1.22
PIK3C3-209ENST00000588631 H3BRJ5 948 aa7.43□□□□□ -1.22
PIK3C3-209ENST00000588631 NDUFB5O43674 189 aa7.43□□□□□ -1.22
PIK3C3-209ENST00000588631 WNT11O96014 354 aa7.43□□□□□ -1.22
PIK3C3-209ENST00000588631 BMP3P12645 472 aa7.43□□□□□ -1.22
PIK3C3-209ENST00000588631 PIP4K2BP78356 416 aa7.43□□□□□ -1.22
PIK3C3-209ENST00000588631 BEND4Q6ZU67 534 aa7.43□□□□□ -1.22
PIK3C3-209ENST00000588631 ZSCAN29Q8IWY8 852 aaPredicted RBP7.43□□□□□ -1.22
PIK3C3-209ENST00000588631 ASB16Q96NS5 453 aa7.43□□□□□ -1.22
PIK3C3-209ENST00000588631 POP1Q99575 1024 aaKnown RBP7.43□□□□□ -1.22
PIK3C3-209ENST00000588631 LCE1DQ5T752 114 aa7.42□□□□□ -1.22
PIK3C3-209ENST00000588631 GPR152Q8TDT2 470 aa7.42□□□□□ -1.22
PIK3C3-209ENST00000588631 CITED4Q96RK1 184 aa7.42□□□□□ -1.22
PIK3C3-209ENST00000588631 RBCK1Q9BYM8 510 aa7.42□□□□□ -1.22
PIK3C3-209ENST00000588631 RNF208Q9H0X6 261 aa7.42□□□□□ -1.22
PIK3C3-209ENST00000588631 AMOTL2Q9Y2J4 779 aa7.42□□□□□ -1.22
PIK3C3-209ENST00000588631 MZF1P28698 734 aaPredicted RBP7.41□□□□□ -1.22
PIK3C3-209ENST00000588631 DNM1Q05193 864 aaKnown RBP7.41□□□□□ -1.22
PIK3C3-209ENST00000588631 NPM2Q86SE8 214 aaKnown RBP7.41□□□□□ -1.22
PIK3C3-209ENST00000588631 OSGEPQ9NPF4 335 aa7.41□□□□□ -1.22
PIK3C3-209ENST00000588631 HOXA10P31260 410 aaPredicted RBP7.4□□□□□ -1.22
PIK3C3-209ENST00000588631 PDE12Q6L8Q7 609 aaKnown RBP7.4□□□□□ -1.22
PIK3C3-209ENST00000588631 NCAPG2Q86XI2 1143 aa7.4□□□□□ -1.22
PIK3C3-209ENST00000588631 TMC1Q8TDI8 760 aa7.4□□□□□ -1.22
PIK3C3-209ENST00000588631 EDEM1Q92611 657 aa7.4□□□□□ -1.22
PIK3C3-209ENST00000588631 KRTAP4-7Q9BYR0 210 aa7.4□□□□□ -1.22
PIK3C3-209ENST00000588631 KCNF1Q9H3M0 494 aa7.4□□□□□ -1.22
PIK3C3-209ENST00000588631 TMEM63CQ9P1W3 806 aa7.4□□□□□ -1.22
PIK3C3-209ENST00000588631 POLIQ9UNA4 740 aa7.4□□□□□ -1.22
PIK3C3-209ENST00000588631 NFKBIEO00221 500 aa7.39□□□□□ -1.23
PIK3C3-209ENST00000588631 SART1O43290 800 aaKnown RBP7.39□□□□□ -1.23
PIK3C3-209ENST00000588631 PDGFAP04085 211 aa7.39□□□□□ -1.23
PIK3C3-209ENST00000588631 TMC7Q7Z402 723 aa7.39□□□□□ -1.23
PIK3C3-209ENST00000588631 NPAS4Q8IUM7 802 aa7.39□□□□□ -1.23
PIK3C3-209ENST00000588631 KANSL3Q9P2N6 904 aa7.39□□□□□ -1.23
PIK3C3-209ENST00000588631 SALL4Q9UJQ4 1053 aa7.39□□□□□ -1.23
PIK3C3-209ENST00000588631 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.39□□□□□ -1.23
PIK3C3-209ENST00000588631 WDR64B1ANS9 1081 aa7.38□□□□□ -1.23
PIK3C3-209ENST00000588631 ACPPP15309 386 aa7.38□□□□□ -1.23
PIK3C3-209ENST00000588631 PCSK2P16519 638 aa7.38□□□□□ -1.23
PIK3C3-209ENST00000588631 USP5P45974 858 aa7.38□□□□□ -1.23
PIK3C3-209ENST00000588631 CABP4P57796 275 aa7.38□□□□□ -1.23
PIK3C3-209ENST00000588631 NLRP12P59046 1061 aa7.38□□□□□ -1.23
PIK3C3-209ENST00000588631 PDE3BQ13370 1112 aa7.38□□□□□ -1.23
PIK3C3-209ENST00000588631 MSMPQ1L6U9 139 aa7.38□□□□□ -1.23
PIK3C3-209ENST00000588631 RUSC1Q9BVN2 902 aa7.38□□□□□ -1.23
PIK3C3-209ENST00000588631 ELP3Q9H9T3 547 aa7.38□□□□□ -1.23
PIK3C3-209ENST00000588631 PIM2Q9P1W9 311 aa7.38□□□□□ -1.23
PIK3C3-209ENST00000588631 MEGF11A6BM72 1044 aa7.37□□□□□ -1.23
PIK3C3-209ENST00000588631 FAM177BA6PVY3 158 aa7.37□□□□□ -1.23
PIK3C3-209ENST00000588631 FZD5Q13467 585 aa7.37□□□□□ -1.23
PIK3C3-209ENST00000588631 FDX2Q6P4F2 183 aa7.37□□□□□ -1.23
PIK3C3-209ENST00000588631 ABI1Q8IZP0 508 aa7.37□□□□□ -1.23
PIK3C3-209ENST00000588631 GJD3Q8N144 294 aa7.37□□□□□ -1.23
PIK3C3-209ENST00000588631 ZNF428Q96B54 188 aa7.37□□□□□ -1.23
PIK3C3-209ENST00000588631 NUDT16Q96DE0 195 aaKnown RBP7.37□□□□□ -1.23
PIK3C3-209ENST00000588631 MFSD14AQ96MC6 490 aa7.37□□□□□ -1.23
PIK3C3-209ENST00000588631 FAM129BQ96TA1 746 aa7.37□□□□□ -1.23
PIK3C3-209ENST00000588631 CNTN3Q9P232 1028 aa7.37□□□□□ -1.23
PIK3C3-209ENST00000588631 SOX13Q9UN79 622 aa7.37□□□□□ -1.23
PIK3C3-209ENST00000588631 RPLP1P05386 114 aaKnown RBP7.36□□□□□ -1.23
PIK3C3-209ENST00000588631 MAP4P27816 1152 aaKnown RBP7.36□□□□□ -1.23
PIK3C3-209ENST00000588631 PLCB3Q01970 1234 aa7.36□□□□□ -1.23
PIK3C3-209ENST00000588631 CPSF6Q16630 551 aaKnown RBP eCLIP7.36□□□□□ -1.23
PIK3C3-209ENST00000588631 C8orf34Q49A92 452 aa7.36□□□□□ -1.23
PIK3C3-209ENST00000588631 SGO2Q562F6 1265 aa7.36□□□□□ -1.23
PIK3C3-209ENST00000588631 NFXL1Q6ZNB6 911 aa7.36□□□□□ -1.23
PIK3C3-209ENST00000588631 TTC16Q8NEE8 873 aa7.36□□□□□ -1.23
PIK3C3-209ENST00000588631 DMRTB1Q96MA1 342 aa7.36□□□□□ -1.23
PIK3C3-209ENST00000588631 BCL2L13Q9BXK5 485 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms