RNA–Protein interactions for RNA: ENST00000588274.1

CLPTM1-208, Transcript of CLPTM1, transmembrane protein, humanhuman

TSL 2

Gene CLPTM1, Length 805 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-208ENST00000588274 DEFB129Q9H1M3 183 aa17.67■□□□□ 0.42
CLPTM1-208ENST00000588274 PCDH10Q9P2E7 1040 aa17.67■□□□□ 0.42
CLPTM1-208ENST00000588274 CACNA1FO60840 1977 aa17.66■□□□□ 0.42
CLPTM1-208ENST00000588274 IGF2BP3O00425 579 aaKnown RBP eCLIP17.66■□□□□ 0.42
CLPTM1-208ENST00000588274 IL1R1P14778 569 aa17.66■□□□□ 0.42
CLPTM1-208ENST00000588274 ARMC9Q7Z3E5 817 aa17.66■□□□□ 0.42
CLPTM1-208ENST00000588274 HDAC9Q9UKV0 1011 aa17.66■□□□□ 0.42
CLPTM1-208ENST00000588274 ANGEL1Q9UNK9 670 aaKnown RBP17.66■□□□□ 0.42
CLPTM1-208ENST00000588274 RBBP6Q7Z6E9 1792 aaKnown RBP17.66■□□□□ 0.42
CLPTM1-208ENST00000588274 SPDYE2BA6NHP3 402 aa17.65■□□□□ 0.42
CLPTM1-208ENST00000588274 FKTNO75072 461 aa17.65■□□□□ 0.42
CLPTM1-208ENST00000588274 TAF5LO75529 589 aa17.65■□□□□ 0.42
CLPTM1-208ENST00000588274 SPDYE6P0CI01 402 aa17.65■□□□□ 0.42
CLPTM1-208ENST00000588274 GJA5P36382 358 aa17.65■□□□□ 0.42
CLPTM1-208ENST00000588274 NCBP3Q53F19 620 aaKnown RBP17.65■□□□□ 0.42
CLPTM1-208ENST00000588274 EPHA10Q5JZY3 1008 aa17.65■□□□□ 0.42
CLPTM1-208ENST00000588274 MPHOSPH8Q99549 860 aa17.65■□□□□ 0.42
CLPTM1-208ENST00000588274 VAMP4O75379 141 aa17.64■□□□□ 0.41
CLPTM1-208ENST00000588274 CAP1Q01518 475 aa17.64■□□□□ 0.41
CLPTM1-208ENST00000588274 FKBP5Q13451 457 aaPredicted RBP17.64■□□□□ 0.41
CLPTM1-208ENST00000588274 BEND3Q5T5X7 828 aa17.64■□□□□ 0.41
CLPTM1-208ENST00000588274 IFNL1Q8IU54 200 aa17.64■□□□□ 0.41
CLPTM1-208ENST00000588274 HELBQ8NG08 1087 aaPredicted RBP17.64■□□□□ 0.41
CLPTM1-208ENST00000588274 WNK4Q96J92 1243 aa17.64■□□□□ 0.41
CLPTM1-208ENST00000588274 MYH16Q9H6N6 1097 aa17.64■□□□□ 0.41
CLPTM1-208ENST00000588274 PPP2R3BQ9Y5P8 575 aa17.64■□□□□ 0.41
CLPTM1-208ENST00000588274 ZBTB48P10074 688 aaPredicted RBP17.63■□□□□ 0.41
CLPTM1-208ENST00000588274 FKBP1AP62942 108 aaKnown RBP17.63■□□□□ 0.41
CLPTM1-208ENST00000588274 DLGAP5Q15398 846 aa17.63■□□□□ 0.41
CLPTM1-208ENST00000588274 PRMT6Q96LA8 375 aaPredicted RBP17.63■□□□□ 0.41
CLPTM1-208ENST00000588274 CLRN2A0PK11 232 aa17.62■□□□□ 0.41
CLPTM1-208ENST00000588274 ANKRD18BA2A2Z9 1011 aa17.62■□□□□ 0.41
CLPTM1-208ENST00000588274 CFAP100Q494V2 611 aa17.62■□□□□ 0.41
CLPTM1-208ENST00000588274 MANSC4A6NHS7 340 aaPredicted RBP17.61■□□□□ 0.41
CLPTM1-208ENST00000588274 F6X3S4 739 aa17.61■□□□□ 0.41
CLPTM1-208ENST00000588274 KCNJ4P48050 445 aa17.61■□□□□ 0.41
CLPTM1-208ENST00000588274 NBPF12Q5TAG4 269 aaPredicted RBP17.61■□□□□ 0.41
CLPTM1-208ENST00000588274 OTOP1Q7RTM1 612 aa17.61■□□□□ 0.41
CLPTM1-208ENST00000588274 CDAN1Q8IWY9 1227 aa17.61■□□□□ 0.41
CLPTM1-208ENST00000588274 JAG2Q9Y219 1238 aa17.61■□□□□ 0.41
CLPTM1-208ENST00000588274 UNCXA6NJT0 531 aa17.6■□□□□ 0.41
CLPTM1-208ENST00000588274 F8W031 263 aaPredicted RBP17.6■□□□□ 0.41
CLPTM1-208ENST00000588274 ALDH1A1P00352 501 aa17.6■□□□□ 0.41
CLPTM1-208ENST00000588274 PTPN18Q99952 460 aa17.6■□□□□ 0.41
CLPTM1-208ENST00000588274 SPINK5Q9NQ38 1064 aaPredicted RBP17.6■□□□□ 0.41
CLPTM1-208ENST00000588274 FAM205AQ6ZU69 1335 aa17.6■□□□□ 0.41
CLPTM1-208ENST00000588274 TESPA1A2RU30 521 aaPredicted RBP17.59■□□□□ 0.41
CLPTM1-208ENST00000588274 USP2O75604 605 aaPredicted RBP17.59■□□□□ 0.41
CLPTM1-208ENST00000588274 IFIT5Q13325 482 aaKnown RBP17.59■□□□□ 0.41
CLPTM1-208ENST00000588274 LMBR1LQ6UX01 489 aa17.59■□□□□ 0.41
CLPTM1-208ENST00000588274 KAZALD1Q96I82 304 aa17.59■□□□□ 0.41
CLPTM1-208ENST00000588274 ZNF594Q96JF6 807 aaPredicted RBP17.59■□□□□ 0.41
CLPTM1-208ENST00000588274 TEPSINQ96N21 525 aa17.59■□□□□ 0.41
CLPTM1-208ENST00000588274 POTEFA5A3E0 1075 aa17.58■□□□□ 0.4
CLPTM1-208ENST00000588274 INHBEP58166 350 aa17.58■□□□□ 0.4
CLPTM1-208ENST00000588274 EXOSC9Q06265 439 aaKnown RBP17.58■□□□□ 0.4
CLPTM1-208ENST00000588274 ZNF804AQ7Z570 1209 aa17.58■□□□□ 0.4
CLPTM1-208ENST00000588274 SLC10A4Q96EP9 437 aa17.58■□□□□ 0.4
CLPTM1-208ENST00000588274 CRHR2Q13324 411 aa17.57■□□□□ 0.4
CLPTM1-208ENST00000588274 RASA3Q14644 834 aa17.57■□□□□ 0.4
CLPTM1-208ENST00000588274 SPDYE2Q495Y8 402 aa17.57■□□□□ 0.4
CLPTM1-208ENST00000588274 TDRD7Q8NHU6 1098 aaKnown RBP17.57■□□□□ 0.4
CLPTM1-208ENST00000588274 TRIM17Q9Y577 477 aa17.57■□□□□ 0.4
CLPTM1-208ENST00000588274 GRM8O00222 908 aa17.56■□□□□ 0.4
CLPTM1-208ENST00000588274 PPP1R12BO60237 982 aaPredicted RBP17.56■□□□□ 0.4
CLPTM1-208ENST00000588274 MS4A4AQ96JQ5 239 aa17.56■□□□□ 0.4
CLPTM1-208ENST00000588274 VEZTQ9HBM0 779 aa17.56■□□□□ 0.4
CLPTM1-208ENST00000588274 GRIK5Q16478 980 aa17.55■□□□□ 0.4
CLPTM1-208ENST00000588274 SUPT20HL1Q3ZLR7 823 aa17.55■□□□□ 0.4
CLPTM1-208ENST00000588274 WDR63Q8IWG1 891 aa17.55■□□□□ 0.4
CLPTM1-208ENST00000588274 CD99L2Q8TCZ2 262 aa17.55■□□□□ 0.4
CLPTM1-208ENST00000588274 ARMC5Q96C12 935 aa17.55■□□□□ 0.4
CLPTM1-208ENST00000588274 ZNF70Q9UC06 446 aaPredicted RBP17.55■□□□□ 0.4
CLPTM1-208ENST00000588274 PTPN22Q9Y2R2 807 aa17.55■□□□□ 0.4
CLPTM1-208ENST00000588274 MYO1BO43795 1136 aa17.54■□□□□ 0.4
CLPTM1-208ENST00000588274 GYG1P46976 350 aa17.54■□□□□ 0.4
CLPTM1-208ENST00000588274 LDHAL6AQ6ZMR3 332 aa17.54■□□□□ 0.4
CLPTM1-208ENST00000588274 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.54■□□□□ 0.4
CLPTM1-208ENST00000588274 ANKRD13AQ8IZ07 590 aa17.54■□□□□ 0.4
CLPTM1-208ENST00000588274 CNKSR2Q8WXI2 1034 aa17.54■□□□□ 0.4
CLPTM1-208ENST00000588274 FAM84BQ96KN1 310 aaPredicted RBP17.54■□□□□ 0.4
CLPTM1-208ENST00000588274 PUS3Q9BZE2 481 aaKnown RBP17.54■□□□□ 0.4
CLPTM1-208ENST00000588274 SERPINA10Q9UK55 444 aa17.54■□□□□ 0.4
CLPTM1-208ENST00000588274 IREB2P48200 963 aaKnown RBP17.53■□□□□ 0.4
CLPTM1-208ENST00000588274 MFSD14BQ5SR56 506 aa17.53■□□□□ 0.4
CLPTM1-208ENST00000588274 BRI3BPQ8WY22 251 aa17.53■□□□□ 0.4
CLPTM1-208ENST00000588274 TDRD3Q9H7E2 651 aaKnown RBP17.53■□□□□ 0.4
CLPTM1-208ENST00000588274 CHMP3Q9Y3E7 222 aa17.53■□□□□ 0.4
CLPTM1-208ENST00000588274 ZSWIM8A7E2V4 1837 aa17.53■□□□□ 0.4
CLPTM1-208ENST00000588274 UTYO14607 1347 aa17.52■□□□□ 0.4
CLPTM1-208ENST00000588274 UBE4AQ14139 1066 aa17.52■□□□□ 0.4
CLPTM1-208ENST00000588274 CCDC57Q2TAC2 916 aa17.52■□□□□ 0.4
CLPTM1-208ENST00000588274 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.52■□□□□ 0.4
CLPTM1-208ENST00000588274 OPTNQ96CV9 577 aa17.52■□□□□ 0.4
CLPTM1-208ENST00000588274 ERO1AQ96HE7 468 aa17.52■□□□□ 0.4
CLPTM1-208ENST00000588274 SUCLG2Q96I99 432 aa17.52■□□□□ 0.4
CLPTM1-208ENST00000588274 ELP3Q9H9T3 547 aa17.52■□□□□ 0.4
CLPTM1-208ENST00000588274 KIAA0100Q14667 2235 aaKnown RBP17.52■□□□□ 0.39
CLPTM1-208ENST00000588274 VGLL4Q14135 290 aa17.51■□□□□ 0.39
CLPTM1-208ENST00000588274 INTS3Q68E01 1043 aaKnown RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms