RNA–Protein interactions for RNA: ENST00000588228.5

NFIX-210, Transcript of nuclear factor I X, humanhuman

TSL 2 BASIC

Gene NFIX, Length 1,692 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-210ENST00000588228 WTIPA6NIX2 430 aaPredicted RBP19.73■□□□□ 0.75
NFIX-210ENST00000588228 SEMA3EO15041 775 aa19.73■□□□□ 0.75
NFIX-210ENST00000588228 GPAA1O43292 621 aa19.73■□□□□ 0.75
NFIX-210ENST00000588228 CPA1P15085 419 aa19.73■□□□□ 0.75
NFIX-210ENST00000588228 NOL8Q76FK4 1167 aaKnown RBP19.73■□□□□ 0.75
NFIX-210ENST00000588228 VPS37DQ86XT2 251 aa19.73■□□□□ 0.75
NFIX-210ENST00000588228 WWC3Q9ULE0 1092 aa19.73■□□□□ 0.75
NFIX-210ENST00000588228 TAF6LQ9Y6J9 622 aa19.73■□□□□ 0.75
NFIX-210ENST00000588228 ZBTB22O15209 634 aa19.72■□□□□ 0.75
NFIX-210ENST00000588228 RPS6KB1P23443 525 aa19.72■□□□□ 0.75
NFIX-210ENST00000588228 ALDH8A1Q9H2A2 487 aaPredicted RBP19.72■□□□□ 0.75
NFIX-210ENST00000588228 CTNNA3Q9UI47 895 aa19.72■□□□□ 0.75
NFIX-210ENST00000588228 DENND2AQ9ULE3 1009 aa19.72■□□□□ 0.75
NFIX-210ENST00000588228 PNPLA7Q6ZV29 1317 aa19.72■□□□□ 0.75
NFIX-210ENST00000588228 HOXA10P31260 410 aaPredicted RBP19.71■□□□□ 0.75
NFIX-210ENST00000588228 RAB3GAP1Q15042 981 aa19.71■□□□□ 0.75
NFIX-210ENST00000588228 NEK1Q96PY6 1258 aa19.71■□□□□ 0.75
NFIX-210ENST00000588228 LEMD3Q9Y2U8 911 aa19.71■□□□□ 0.75
NFIX-210ENST00000588228 FOXP2O15409 715 aa19.71■□□□□ 0.75
NFIX-210ENST00000588228 ZGPATQ8N5A5 531 aaKnown RBP19.71■□□□□ 0.75
NFIX-210ENST00000588228 PDS5AQ29RF7 1337 aaKnown RBP19.7■□□□□ 0.74
NFIX-210ENST00000588228 FRAT2O75474 233 aaPredicted RBP19.7■□□□□ 0.74
NFIX-210ENST00000588228 HIBADHP31937 336 aaKnown RBP19.7■□□□□ 0.74
NFIX-210ENST00000588228 ANKRD1Q15327 319 aa19.7■□□□□ 0.74
NFIX-210ENST00000588228 MAGEB6Q8N7X4 407 aa19.7■□□□□ 0.74
NFIX-210ENST00000588228 ZSCAN31Q96LW9 406 aaPredicted RBP19.7■□□□□ 0.74
NFIX-210ENST00000588228 CAMKK2Q96RR4 588 aa19.7■□□□□ 0.74
NFIX-210ENST00000588228 CRAMP1Q96RY5 1269 aa19.7■□□□□ 0.74
NFIX-210ENST00000588228 MYH7P12883 1935 aa19.7■□□□□ 0.74
NFIX-210ENST00000588228 XDHP47989 1333 aa19.7■□□□□ 0.74
NFIX-210ENST00000588228 DOCK2Q92608 1830 aa19.69■□□□□ 0.74
NFIX-210ENST00000588228 BBOX1O75936 387 aa19.69■□□□□ 0.74
NFIX-210ENST00000588228 HMGB1P09429 215 aaKnown RBP19.69■□□□□ 0.74
NFIX-210ENST00000588228 KLRK1P26718 216 aa19.69■□□□□ 0.74
NFIX-210ENST00000588228 NUCB2P80303 420 aa19.69■□□□□ 0.74
NFIX-210ENST00000588228 BRIP1Q9BX63 1249 aa19.69■□□□□ 0.74
NFIX-210ENST00000588228 SH2B1Q9NRF2 756 aaPredicted RBP19.69■□□□□ 0.74
NFIX-210ENST00000588228 ANKIB1Q9P2G1 1089 aa19.69■□□□□ 0.74
NFIX-210ENST00000588228 LRP2BPQ9P2M1 347 aa19.69■□□□□ 0.74
NFIX-210ENST00000588228 IQSEC3Q9UPP2 1182 aaPredicted RBP19.69■□□□□ 0.74
NFIX-210ENST00000588228 IRS2Q9Y4H2 1338 aa19.69■□□□□ 0.74
NFIX-210ENST00000588228 COL1A1P02452 1464 aaPredicted RBP19.69■□□□□ 0.74
NFIX-210ENST00000588228 FGAP02671 866 aa19.68■□□□□ 0.74
NFIX-210ENST00000588228 EZH2Q15910 746 aaKnown RBP19.68■□□□□ 0.74
NFIX-210ENST00000588228 IMMTQ16891 758 aaKnown RBP19.68■□□□□ 0.74
NFIX-210ENST00000588228 AIDAQ96BJ3 306 aa19.68■□□□□ 0.74
NFIX-210ENST00000588228 PARP3Q9Y6F1 533 aa19.68■□□□□ 0.74
NFIX-210ENST00000588228 NRXN2Q9P2S2 1712 aa19.67■□□□□ 0.74
NFIX-210ENST00000588228 MMP10P09238 476 aa19.67■□□□□ 0.74
NFIX-210ENST00000588228 EN1Q05925 392 aaPredicted RBP19.67■□□□□ 0.74
NFIX-210ENST00000588228 STOX1Q6ZVD7 989 aa19.67■□□□□ 0.74
NFIX-210ENST00000588228 TMC4Q7Z404 712 aa19.67■□□□□ 0.74
NFIX-210ENST00000588228 STRBPQ96SI9 672 aaKnown RBP19.67■□□□□ 0.74
NFIX-210ENST00000588228 COL9A3Q14050 684 aaPredicted RBP19.66■□□□□ 0.74
NFIX-210ENST00000588228 SLC15A2Q16348 729 aa19.66■□□□□ 0.74
NFIX-210ENST00000588228 TTLL5Q6EMB2 1281 aa19.66■□□□□ 0.74
NFIX-210ENST00000588228 C15orf52Q6ZUT6 534 aaKnown RBP19.66■□□□□ 0.74
NFIX-210ENST00000588228 E7EWF7 191 aa19.65■□□□□ 0.74
NFIX-210ENST00000588228 TNPO1Q92973 898 aaKnown RBP19.65■□□□□ 0.74
NFIX-210ENST00000588228 ANO8Q9HCE9 1232 aaPredicted RBP19.65■□□□□ 0.74
NFIX-210ENST00000588228 STK32BQ9NY57 414 aa19.65■□□□□ 0.74
NFIX-210ENST00000588228 ABCF2Q9UG63 623 aa19.65■□□□□ 0.74
NFIX-210ENST00000588228 ATP2B4P23634 1241 aa19.65■□□□□ 0.74
NFIX-210ENST00000588228 GPSM2P81274 684 aa19.65■□□□□ 0.74
NFIX-210ENST00000588228 LARP6Q9BRS8 491 aaKnown RBP19.65■□□□□ 0.74
NFIX-210ENST00000588228 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.65■□□□□ 0.74
NFIX-210ENST00000588228 A0A0G2JLW4 131 aa19.64■□□□□ 0.73
NFIX-210ENST00000588228 MBD4O95243 580 aa19.64■□□□□ 0.73
NFIX-210ENST00000588228 GNAT2P19087 354 aa19.64■□□□□ 0.73
NFIX-210ENST00000588228 TOB2Q14106 344 aaPredicted RBP19.64■□□□□ 0.73
NFIX-210ENST00000588228 ALX1Q15699 326 aa19.64■□□□□ 0.73
NFIX-210ENST00000588228 DHX32Q7L7V1 743 aaKnown RBP19.64■□□□□ 0.73
NFIX-210ENST00000588228 TXNRD3Q86VQ6 643 aa19.64■□□□□ 0.73
NFIX-210ENST00000588228 PODXL2Q9NZ53 605 aa19.64■□□□□ 0.73
NFIX-210ENST00000588228 RAI14Q9P0K7 980 aa19.64■□□□□ 0.73
NFIX-210ENST00000588228 TPCN1Q9ULQ1 816 aa19.64■□□□□ 0.73
NFIX-210ENST00000588228 ZMYM6O95789 1325 aa19.64■□□□□ 0.73
NFIX-210ENST00000588228 ZNF213O14771 459 aa19.63■□□□□ 0.73
NFIX-210ENST00000588228 LARGE1O95461 756 aa19.63■□□□□ 0.73
NFIX-210ENST00000588228 PDE6BP35913 854 aa19.63■□□□□ 0.73
NFIX-210ENST00000588228 TMED8Q6PL24 325 aaPredicted RBP19.63■□□□□ 0.73
NFIX-210ENST00000588228 TCEANC2Q96MN5 208 aa19.63■□□□□ 0.73
NFIX-210ENST00000588228 GGA1Q9UJY5 639 aa19.63■□□□□ 0.73
NFIX-210ENST00000588228 PATL2C9JE40 543 aaKnown RBP19.62■□□□□ 0.73
NFIX-210ENST00000588228 IGSF3O75054 1194 aa19.62■□□□□ 0.73
NFIX-210ENST00000588228 SRGNP10124 158 aa19.62■□□□□ 0.73
NFIX-210ENST00000588228 NPR1P16066 1061 aa19.62■□□□□ 0.73
NFIX-210ENST00000588228 CYP7A1P22680 504 aa19.62■□□□□ 0.73
NFIX-210ENST00000588228 MCM4P33991 863 aa19.62■□□□□ 0.73
NFIX-210ENST00000588228 SF3B2Q13435 895 aaKnown RBP19.62■□□□□ 0.73
NFIX-210ENST00000588228 ME3Q16798 604 aa19.62■□□□□ 0.73
NFIX-210ENST00000588228 SLC51AQ86UW1 340 aa19.62■□□□□ 0.73
NFIX-210ENST00000588228 GBP4Q96PP9 640 aa19.62■□□□□ 0.73
NFIX-210ENST00000588228 NSFL1CQ9UNZ2 370 aaKnown RBP19.62■□□□□ 0.73
NFIX-210ENST00000588228 MYO5AQ9Y4I1 1855 aaKnown RBP19.62■□□□□ 0.73
NFIX-210ENST00000588228 PPEF1O14829 653 aaPredicted RBP19.62■□□□□ 0.73
NFIX-210ENST00000588228 APPP05067 770 aa19.62■□□□□ 0.73
NFIX-210ENST00000588228 BAG6P46379 1132 aa19.62■□□□□ 0.73
NFIX-210ENST00000588228 EXOSC10Q01780 885 aaKnown RBP19.62■□□□□ 0.73
NFIX-210ENST00000588228 MSL1Q68DK7 614 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms