RNA–Protein interactions for RNA: ENST00000588170.5

GRN-212, Transcript of granulin precursor, human

TSL 2

Gene GRN, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GRN-212	ENST00000588170	USP50	Q70EL3	339 aa	Predicted RBP	18.66	■□□□□ 0.58
GRN-212	ENST00000588170	XAGE2	Q96GT9	111 aa		18.66	■□□□□ 0.58
GRN-212	ENST00000588170	AKAP2	Q9Y2D5	859 aa		18.66	■□□□□ 0.58
GRN-212	ENST00000588170	FAM205A	Q6ZU69	1335 aa		18.66	■□□□□ 0.58
GRN-212	ENST00000588170	USP17L8	P0C7I0	530 aa		18.65	■□□□□ 0.58
GRN-212	ENST00000588170	ZNF280A	P59817	542 aa	Predicted RBP	18.65	■□□□□ 0.58
GRN-212	ENST00000588170	CHAF1A	Q13111	956 aa	Predicted RBP	18.65	■□□□□ 0.58
GRN-212	ENST00000588170	GRIK5	Q16478	980 aa		18.65	■□□□□ 0.58
GRN-212	ENST00000588170	CHADL	Q6NUI6	762 aa		18.65	■□□□□ 0.58
GRN-212	ENST00000588170	APBB1	O00213	710 aa		18.64	■□□□□ 0.57
GRN-212	ENST00000588170	HMMR	O75330	724 aa		18.64	■□□□□ 0.57
GRN-212	ENST00000588170	FRAT2	O75474	233 aa	Predicted RBP	18.64	■□□□□ 0.57
GRN-212	ENST00000588170	MAP1S	Q66K74	1059 aa	Predicted RBP	18.64	■□□□□ 0.57
GRN-212	ENST00000588170	CCDC102B	Q68D86	513 aa		18.64	■□□□□ 0.57
GRN-212	ENST00000588170	LDHD	Q86WU2	507 aa		18.64	■□□□□ 0.57
GRN-212	ENST00000588170	KIAA0825	Q8IV33	1275 aa		18.64	■□□□□ 0.57
GRN-212	ENST00000588170	SMC1B	Q8NDV3	1235 aa		18.64	■□□□□ 0.57
GRN-212	ENST00000588170	ZNF609	O15014	1411 aa		18.64	■□□□□ 0.57
GRN-212	ENST00000588170	ADAMTSL1	Q8N6G6	1762 aa		18.63	■□□□□ 0.57
GRN-212	ENST00000588170		F8W031	263 aa	Predicted RBP	18.63	■□□□□ 0.57
GRN-212	ENST00000588170	TNNI3K	Q59H18	835 aa		18.63	■□□□□ 0.57
GRN-212	ENST00000588170	EXOC6	Q8TAG9	804 aa		18.63	■□□□□ 0.57
GRN-212	ENST00000588170	GPR108	Q9NPR9	543 aa		18.63	■□□□□ 0.57
GRN-212	ENST00000588170	FPGT-TNNI3K	V9GXZ4	949 aa		18.63	■□□□□ 0.57
GRN-212	ENST00000588170	IRX6	P78412	446 aa	Predicted RBP	18.62	■□□□□ 0.57
GRN-212	ENST00000588170	FSTL1	Q12841	308 aa		18.62	■□□□□ 0.57
GRN-212	ENST00000588170	MFSD14B	Q5SR56	506 aa		18.62	■□□□□ 0.57
GRN-212	ENST00000588170	RHPN1	Q8TCX5	695 aa		18.62	■□□□□ 0.57
GRN-212	ENST00000588170	EAF2	Q96CJ1	260 aa	Predicted RBP	18.62	■□□□□ 0.57
GRN-212	ENST00000588170	MYOZ2	Q9NPC6	264 aa		18.62	■□□□□ 0.57
GRN-212	ENST00000588170	ASTN2	O75129	1339 aa	Predicted RBP	18.62	■□□□□ 0.57
GRN-212	ENST00000588170	MYO3B	Q8WXR4	1341 aa		18.62	■□□□□ 0.57
GRN-212	ENST00000588170	ARAP2	Q8WZ64	1704 aa		18.61	■□□□□ 0.57
GRN-212	ENST00000588170	COL1A1	P02452	1464 aa	Predicted RBP	18.61	■□□□□ 0.57
GRN-212	ENST00000588170	FKBP1A	P62942	108 aa	Known RBP	18.61	■□□□□ 0.57
GRN-212	ENST00000588170	DBNDD2	Q9BQY9	259 aa		18.61	■□□□□ 0.57
GRN-212	ENST00000588170	CCDC8	Q9H0W5	538 aa	Predicted RBP	18.61	■□□□□ 0.57
GRN-212	ENST00000588170	IL1RAPL2	Q9NP60	686 aa		18.61	■□□□□ 0.57
GRN-212	ENST00000588170	TLR7	Q9NYK1	1049 aa	Known RBP	18.61	■□□□□ 0.57
GRN-212	ENST00000588170	PGAP2	Q9UHJ9	254 aa		18.61	■□□□□ 0.57
GRN-212	ENST00000588170	PCDHAC2	Q9Y5I4	1007 aa		18.61	■□□□□ 0.57
GRN-212	ENST00000588170	POLR2A	P24928	1970 aa	Known RBP	18.61	■□□□□ 0.57
GRN-212	ENST00000588170	ITGBL1	O95965	494 aa	Predicted RBP	18.6	■□□□□ 0.57
GRN-212	ENST00000588170	HSPA6	P17066	643 aa		18.6	■□□□□ 0.57
GRN-212	ENST00000588170	FMR1	Q06787	632 aa	Known RBP eCLIP	18.6	■□□□□ 0.57
GRN-212	ENST00000588170	SCARF1	Q14162	830 aa		18.6	■□□□□ 0.57
GRN-212	ENST00000588170	KIF4B	Q2VIQ3	1234 aa		18.6	■□□□□ 0.57
GRN-212	ENST00000588170	ERC1	Q8IUD2	1116 aa		18.6	■□□□□ 0.57
GRN-212	ENST00000588170	CNTROB	Q8N137	903 aa		18.6	■□□□□ 0.57
GRN-212	ENST00000588170	BCL11A	Q9H165	835 aa		18.6	■□□□□ 0.57
GRN-212	ENST00000588170	GNL3L	Q9NVN8	582 aa	Known RBP	18.6	■□□□□ 0.57
GRN-212	ENST00000588170	RASGRF1	Q13972	1273 aa		18.59	■□□□□ 0.57
GRN-212	ENST00000588170	NBPF9	Q3BBW0	867 aa		18.59	■□□□□ 0.57
GRN-212	ENST00000588170	HSP90AB4P	Q58FF6	505 aa		18.59	■□□□□ 0.57
GRN-212	ENST00000588170	GORAB	Q5T7V8	394 aa		18.59	■□□□□ 0.57
GRN-212	ENST00000588170	DLK2	Q6UY11	383 aa		18.59	■□□□□ 0.57
GRN-212	ENST00000588170	OGFOD1	Q8N543	542 aa		18.59	■□□□□ 0.57
GRN-212	ENST00000588170	DBNL	Q9UJU6	430 aa	Known RBP	18.59	■□□□□ 0.57
GRN-212	ENST00000588170	CEP350	Q5VT06	3117 aa		18.58	■□□□□ 0.56
GRN-212	ENST00000588170	PI16	Q6UXB8	463 aa		18.58	■□□□□ 0.56
GRN-212	ENST00000588170	DCTPP1	Q9H773	170 aa		18.58	■□□□□ 0.56
GRN-212	ENST00000588170	MYH13	Q9UKX3	1938 aa		18.57	■□□□□ 0.56
GRN-212	ENST00000588170	SMARCA5	O60264	1052 aa	Predicted RBP	18.57	■□□□□ 0.56
GRN-212	ENST00000588170	RAB11FIP3	O75154	756 aa		18.57	■□□□□ 0.56
GRN-212	ENST00000588170	AACS	Q86V21	672 aa		18.57	■□□□□ 0.56
GRN-212	ENST00000588170	ZC3H15	Q8WU90	426 aa	Known RBP	18.57	■□□□□ 0.56
GRN-212	ENST00000588170	KIF1BP	Q96EK5	621 aa		18.57	■□□□□ 0.56
GRN-212	ENST00000588170	HDAC9	Q9UKV0	1011 aa		18.57	■□□□□ 0.56
GRN-212	ENST00000588170	DENND2A	Q9ULE3	1009 aa		18.57	■□□□□ 0.56
GRN-212	ENST00000588170	TTF2	Q9UNY4	1162 aa	Known RBP	18.57	■□□□□ 0.56
GRN-212	ENST00000588170	SCAF8	Q9UPN6	1271 aa	Known RBP	18.57	■□□□□ 0.56
GRN-212	ENST00000588170	AOX1	Q06278	1338 aa		18.56	■□□□□ 0.56
GRN-212	ENST00000588170	TRAF5	O00463	557 aa		18.56	■□□□□ 0.56
GRN-212	ENST00000588170	WNT10B	O00744	389 aa		18.56	■□□□□ 0.56
GRN-212	ENST00000588170	SEMA3E	O15041	775 aa		18.56	■□□□□ 0.56
GRN-212	ENST00000588170	ARID4A	P29374	1257 aa	Predicted RBP	18.56	■□□□□ 0.56
GRN-212	ENST00000588170	WDR66	Q8TBY9	1149 aa		18.56	■□□□□ 0.56
GRN-212	ENST00000588170	TBC1D22A	Q8WUA7	517 aa		18.56	■□□□□ 0.56
GRN-212	ENST00000588170	ZBED3	Q96IU2	234 aa	Predicted RBP	18.56	■□□□□ 0.56
GRN-212	ENST00000588170	GLIS2	Q9BZE0	524 aa	Predicted RBP	18.56	■□□□□ 0.56
GRN-212	ENST00000588170	HMG20B	Q9P0W2	317 aa		18.56	■□□□□ 0.56
GRN-212	ENST00000588170	PASK	Q96RG2	1323 aa		18.55	■□□□□ 0.56
GRN-212	ENST00000588170	ZBTB22	O15209	634 aa		18.55	■□□□□ 0.56
GRN-212	ENST00000588170	MCAM	P43121	646 aa		18.55	■□□□□ 0.56
GRN-212	ENST00000588170	CFAP100	Q494V2	611 aa		18.55	■□□□□ 0.56
GRN-212	ENST00000588170	USP48	Q86UV5	1035 aa		18.55	■□□□□ 0.56
GRN-212	ENST00000588170	PRMT6	Q96LA8	375 aa	Predicted RBP	18.55	■□□□□ 0.56
GRN-212	ENST00000588170	SNRK	Q9NRH2	765 aa		18.55	■□□□□ 0.56
GRN-212	ENST00000588170	MMP14	P50281	582 aa		18.54	■□□□□ 0.56
GRN-212	ENST00000588170	HTRA3	P83110	453 aa		18.54	■□□□□ 0.56
GRN-212	ENST00000588170	DLGAP5	Q15398	846 aa		18.54	■□□□□ 0.56
GRN-212	ENST00000588170	CCDC158	Q5M9N0	1113 aa		18.54	■□□□□ 0.56
GRN-212	ENST00000588170	TTC39A	Q5SRH9	613 aa		18.54	■□□□□ 0.56
GRN-212	ENST00000588170	ANGEL2	Q5VTE6	544 aa	Known RBP	18.54	■□□□□ 0.56
GRN-212	ENST00000588170	TBC1D9	Q6ZT07	1266 aa		18.54	■□□□□ 0.56
GRN-212	ENST00000588170	SPATA5	Q8NB90	893 aa		18.54	■□□□□ 0.56
GRN-212	ENST00000588170	GGA3	Q9NZ52	723 aa		18.54	■□□□□ 0.56
GRN-212	ENST00000588170	UQCRFS1P1	P0C7P4	283 aa		18.53	■□□□□ 0.56
GRN-212	ENST00000588170	PRDX5	P30044	214 aa		18.53	■□□□□ 0.56
GRN-212	ENST00000588170	RBM5	P52756	815 aa	Known RBP eCLIP	18.53	■□□□□ 0.56

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