RNA–Protein interactions for RNA: ENST00000587440.1

LDLRAD4-209, Transcript of low density lipoprotein receptor class A domain containing 4, humanhuman

TSL 3

Gene LDLRAD4, Length 335 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD4-209ENST00000587440 TMC1Q8TDI8 760 aa5.06□□□□□ -1.6
LDLRAD4-209ENST00000587440 HSH2DQ96JZ2 352 aa5.06□□□□□ -1.6
LDLRAD4-209ENST00000587440 FAM161BQ96MY7 647 aa5.06□□□□□ -1.6
LDLRAD4-209ENST00000587440 CFHR5Q9BXR6 569 aa5.06□□□□□ -1.6
LDLRAD4-209ENST00000587440 CACNA1AO00555 2505 aa5.06□□□□□ -1.6
LDLRAD4-209ENST00000587440 FYCO1Q9BQS8 1478 aa5.06□□□□□ -1.6
LDLRAD4-209ENST00000587440 KIAA1107Q9UPP5 1409 aa5.06□□□□□ -1.6
LDLRAD4-209ENST00000587440 THSD7AQ9UPZ6 1657 aa5.05□□□□□ -1.6
LDLRAD4-209ENST00000587440 A6NHS1 94 aa5.05□□□□□ -1.6
LDLRAD4-209ENST00000587440 NRG2O14511 850 aaPredicted RBP5.05□□□□□ -1.6
LDLRAD4-209ENST00000587440 OPLAHO14841 1288 aa5.05□□□□□ -1.6
LDLRAD4-209ENST00000587440 PRPF40AO75400 957 aaKnown RBP5.05□□□□□ -1.6
LDLRAD4-209ENST00000587440 DGAT1O75907 488 aa5.05□□□□□ -1.6
LDLRAD4-209ENST00000587440 TRIM37O94972 964 aa5.05□□□□□ -1.6
LDLRAD4-209ENST00000587440 UPP2O95045 317 aa5.05□□□□□ -1.6
LDLRAD4-209ENST00000587440 THBS1P07996 1170 aa5.05□□□□□ -1.6
LDLRAD4-209ENST00000587440 RHOQP17081 205 aa5.05□□□□□ -1.6
LDLRAD4-209ENST00000587440 HTRA3P83110 453 aa5.05□□□□□ -1.6
LDLRAD4-209ENST00000587440 PDE3BQ13370 1112 aa5.05□□□□□ -1.6
LDLRAD4-209ENST00000587440 ENOX2Q16206 610 aaKnown RBP5.05□□□□□ -1.6
LDLRAD4-209ENST00000587440 NBPF1Q3BBV0 1214 aa5.05□□□□□ -1.6
LDLRAD4-209ENST00000587440 RHPN1Q8TCX5 695 aa5.05□□□□□ -1.6
LDLRAD4-209ENST00000587440 GPR152Q8TDT2 470 aa5.05□□□□□ -1.6
LDLRAD4-209ENST00000587440 DDX17Q92841 729 aaKnown RBP5.05□□□□□ -1.6
LDLRAD4-209ENST00000587440 SUSD3Q96L08 255 aa5.05□□□□□ -1.6
LDLRAD4-209ENST00000587440 ZFP42Q96MM3 310 aa5.05□□□□□ -1.6
LDLRAD4-209ENST00000587440 ZIC5Q96T25 663 aa5.05□□□□□ -1.6
LDLRAD4-209ENST00000587440 DUSP9Q99956 384 aaKnown RBP5.05□□□□□ -1.6
LDLRAD4-209ENST00000587440 NIF3L1Q9GZT8 377 aa5.05□□□□□ -1.6
LDLRAD4-209ENST00000587440 GGNBP2Q9H3C7 697 aa5.05□□□□□ -1.6
LDLRAD4-209ENST00000587440 PIK3C2BO00750 1634 aa5.05□□□□□ -1.6
LDLRAD4-209ENST00000587440 SZT2Q5T011 3432 aa5.04□□□□□ -1.6
LDLRAD4-209ENST00000587440 PNMA6FA0A0J9YX94 578 aa5.04□□□□□ -1.6
LDLRAD4-209ENST00000587440 A0A1B0GTH6 734 aa5.04□□□□□ -1.6
LDLRAD4-209ENST00000587440 ST8SIA5O15466 376 aa5.04□□□□□ -1.6
LDLRAD4-209ENST00000587440 MSX1P28360 303 aa5.04□□□□□ -1.6
LDLRAD4-209ENST00000587440 INPP5BP32019 993 aa5.04□□□□□ -1.6
LDLRAD4-209ENST00000587440 PLCB3Q01970 1234 aa5.04□□□□□ -1.6
LDLRAD4-209ENST00000587440 ORC1Q13415 861 aa5.04□□□□□ -1.6
LDLRAD4-209ENST00000587440 TSNAXIP1Q2TAA8 658 aa5.04□□□□□ -1.6
LDLRAD4-209ENST00000587440 NUDT16Q96DE0 195 aaKnown RBP5.04□□□□□ -1.6
LDLRAD4-209ENST00000587440 BACH2Q9BYV9 841 aa5.04□□□□□ -1.6
LDLRAD4-209ENST00000587440 CRISPLD1Q9H336 500 aa5.04□□□□□ -1.6
LDLRAD4-209ENST00000587440 PARP2Q9UGN5 583 aa5.04□□□□□ -1.6
LDLRAD4-209ENST00000587440 PLCH1Q4KWH8 1693 aa5.04□□□□□ -1.6
LDLRAD4-209ENST00000587440 COL6A3P12111 3177 aa5.04□□□□□ -1.6
LDLRAD4-209ENST00000587440 DHX57Q6P158 1386 aaKnown RBP5.04□□□□□ -1.6
LDLRAD4-209ENST00000587440 TRPM2O94759 1503 aa5.03□□□□□ -1.6
LDLRAD4-209ENST00000587440 CCDC85CA6NKD9 419 aa5.03□□□□□ -1.6
LDLRAD4-209ENST00000587440 KIF3BO15066 747 aa5.03□□□□□ -1.6
LDLRAD4-209ENST00000587440 MICAL2O94851 1124 aa5.03□□□□□ -1.6
LDLRAD4-209ENST00000587440 GTF2E1P29083 439 aaPredicted RBP5.03□□□□□ -1.6
LDLRAD4-209ENST00000587440 USP5P45974 858 aa5.03□□□□□ -1.6
LDLRAD4-209ENST00000587440 UBAP2LQ14157 1087 aaKnown RBP5.03□□□□□ -1.6
LDLRAD4-209ENST00000587440 TRIP4Q15650 581 aaPredicted RBP5.03□□□□□ -1.6
LDLRAD4-209ENST00000587440 AIDAQ96BJ3 306 aa5.03□□□□□ -1.6
LDLRAD4-209ENST00000587440 ATP13A2Q9NQ11 1180 aa5.03□□□□□ -1.6
LDLRAD4-209ENST00000587440 AAASQ9NRG9 546 aa5.03□□□□□ -1.6
LDLRAD4-209ENST00000587440 DACH1Q9UI36 760 aa5.03□□□□□ -1.6
LDLRAD4-209ENST00000587440 HCN2Q9UL51 889 aa5.03□□□□□ -1.6
LDLRAD4-209ENST00000587440 USP20Q9Y2K6 914 aa5.03□□□□□ -1.6
LDLRAD4-209ENST00000587440 NOS1P29475 1434 aa5.03□□□□□ -1.6
LDLRAD4-209ENST00000587440 PLEKHG1Q9ULL1 1385 aa5.03□□□□□ -1.6
LDLRAD4-209ENST00000587440 FIGNL2A6NMB9 653 aa5.02□□□□□ -1.61
LDLRAD4-209ENST00000587440 LCE2BO14633 110 aa5.02□□□□□ -1.61
LDLRAD4-209ENST00000587440 AXIN1O15169 862 aa5.02□□□□□ -1.61
LDLRAD4-209ENST00000587440 GFRA3O60609 400 aa5.02□□□□□ -1.61
LDLRAD4-209ENST00000587440 TATP17735 454 aaPredicted RBP5.02□□□□□ -1.61
LDLRAD4-209ENST00000587440 CTCFP49711 727 aaPredicted RBP5.02□□□□□ -1.61
LDLRAD4-209ENST00000587440 IDH3AP50213 366 aa5.02□□□□□ -1.61
LDLRAD4-209ENST00000587440 DAB2P98082 770 aa5.02□□□□□ -1.61
LDLRAD4-209ENST00000587440 TYRO3Q06418 890 aa5.02□□□□□ -1.61
LDLRAD4-209ENST00000587440 SCARF1Q14162 830 aa5.02□□□□□ -1.61
LDLRAD4-209ENST00000587440 FAM182BQ5T319 152 aa5.02□□□□□ -1.61
LDLRAD4-209ENST00000587440 TMC4Q7Z404 712 aa5.02□□□□□ -1.61
LDLRAD4-209ENST00000587440 BTLAQ7Z6A9 289 aa5.02□□□□□ -1.61
LDLRAD4-209ENST00000587440 PDGFDQ9GZP0 370 aaPredicted RBP5.02□□□□□ -1.61
LDLRAD4-209ENST00000587440 TIMMDC1Q9NPL8 285 aa5.02□□□□□ -1.61
LDLRAD4-209ENST00000587440 TBX22Q9Y458 520 aa5.02□□□□□ -1.61
LDLRAD4-209ENST00000587440 DYRK1BQ9Y463 629 aa5.02□□□□□ -1.61
LDLRAD4-209ENST00000587440 KCNMB2Q9Y691 235 aa5.02□□□□□ -1.61
LDLRAD4-209ENST00000587440 CDC42BPAQ5VT25 1732 aa5.02□□□□□ -1.61
LDLRAD4-209ENST00000587440 EHBP1L1Q8N3D4 1523 aa5.02□□□□□ -1.61
LDLRAD4-209ENST00000587440 C1orf167Q5SNV9 1468 aa5.01□□□□□ -1.61
LDLRAD4-209ENST00000587440 ABCA3Q99758 1704 aa5.01□□□□□ -1.61
LDLRAD4-209ENST00000587440 PRAG1Q86YV5 1406 aa5.01□□□□□ -1.61
LDLRAD4-209ENST00000587440 A0A1W2PNR3 127 aa5.01□□□□□ -1.61
LDLRAD4-209ENST00000587440 FOXN1O15353 648 aa5.01□□□□□ -1.61
LDLRAD4-209ENST00000587440 YBX3P16989 372 aaKnown RBP eCLIP5.01□□□□□ -1.61
LDLRAD4-209ENST00000587440 ZEB1P37275 1124 aaPredicted RBP5.01□□□□□ -1.61
LDLRAD4-209ENST00000587440 PKDCCQ504Y2 493 aa5.01□□□□□ -1.61
LDLRAD4-209ENST00000587440 SAMD5Q5TGI4 173 aa5.01□□□□□ -1.61
LDLRAD4-209ENST00000587440 LRRC69Q6ZNQ3 347 aa5.01□□□□□ -1.61
LDLRAD4-209ENST00000587440 CSRNP1Q96S65 589 aa5.01□□□□□ -1.61
LDLRAD4-209ENST00000587440 FOXD3Q9UJU5 478 aaPredicted RBP5.01□□□□□ -1.61
LDLRAD4-209ENST00000587440 ADGRL2O95490 1459 aa5□□□□□ -1.61
LDLRAD4-209ENST00000587440 ARHGAP31Q2M1Z3 1444 aa5□□□□□ -1.61
LDLRAD4-209ENST00000587440 LOC105371045A0A1W2PR82 267 aa5□□□□□ -1.61
LDLRAD4-209ENST00000587440 SOBPA7XYQ1 873 aa5□□□□□ -1.61
LDLRAD4-209ENST00000587440 EIF1AYO14602 144 aaKnown RBP5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms