RNA–Protein interactions for RNA: ENST00000587338.1

SDF2-204, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-204ENST00000587338 MYO1BO43795 1136 aa11.01□□□□□ -0.65
SDF2-204ENST00000587338 DDX58O95786 925 aaKnown RBP11.01□□□□□ -0.65
SDF2-204ENST00000587338 IGHMBP2P38935 993 aaKnown RBP11.01□□□□□ -0.65
SDF2-204ENST00000587338 KCNJ4P48050 445 aa11.01□□□□□ -0.65
SDF2-204ENST00000587338 SUPT20HL1Q3ZLR7 823 aa11.01□□□□□ -0.65
SDF2-204ENST00000587338 RUNDC1Q96C34 613 aa11.01□□□□□ -0.65
SDF2-204ENST00000587338 PTPN18Q99952 460 aa11.01□□□□□ -0.65
SDF2-204ENST00000587338 MAP3K2Q9Y2U5 619 aa11.01□□□□□ -0.65
SDF2-204ENST00000587338 PCDHAC2Q9Y5I4 1007 aa11.01□□□□□ -0.65
SDF2-204ENST00000587338 PTCH2Q9Y6C5 1203 aa11.01□□□□□ -0.65
SDF2-204ENST00000587338 UNCXA6NJT0 531 aa11□□□□□ -0.65
SDF2-204ENST00000587338 NBPF12Q5TAG4 269 aaPredicted RBP11□□□□□ -0.65
SDF2-204ENST00000587338 CHRDL2Q6WN34 429 aa11□□□□□ -0.65
SDF2-204ENST00000587338 NBPF11Q86T75 865 aa11□□□□□ -0.65
SDF2-204ENST00000587338 ANKRD13AQ8IZ07 590 aa11□□□□□ -0.65
SDF2-204ENST00000587338 CERS5Q8N5B7 392 aa11□□□□□ -0.65
SDF2-204ENST00000587338 ANKRD2Q9GZV1 360 aa11□□□□□ -0.65
SDF2-204ENST00000587338 ELP3Q9H9T3 547 aa11□□□□□ -0.65
SDF2-204ENST00000587338 LAMB1P07942 1786 aa11□□□□□ -0.65
SDF2-204ENST00000587338 COL6A3P12111 3177 aa11□□□□□ -0.65
SDF2-204ENST00000587338 SPDYE2BA6NHP3 402 aa10.99□□□□□ -0.65
SDF2-204ENST00000587338 USP2O75604 605 aaPredicted RBP10.99□□□□□ -0.65
SDF2-204ENST00000587338 IGKV5-2P06315 115 aa10.99□□□□□ -0.65
SDF2-204ENST00000587338 SPDYE6P0CI01 402 aa10.99□□□□□ -0.65
SDF2-204ENST00000587338 ARHGEF6Q15052 776 aa10.99□□□□□ -0.65
SDF2-204ENST00000587338 WDR43Q15061 677 aaKnown RBP eCLIP10.99□□□□□ -0.65
SDF2-204ENST00000587338 TAF1CQ15572 869 aaPredicted RBP10.99□□□□□ -0.65
SDF2-204ENST00000587338 CFAP100Q494V2 611 aa10.99□□□□□ -0.65
SDF2-204ENST00000587338 OPTNQ96CV9 577 aa10.99□□□□□ -0.65
SDF2-204ENST00000587338 MPHOSPH8Q99549 860 aa10.99□□□□□ -0.65
SDF2-204ENST00000587338 CD209Q9NNX6 404 aa10.99□□□□□ -0.65
SDF2-204ENST00000587338 AOX1Q06278 1338 aa10.99□□□□□ -0.65
SDF2-204ENST00000587338 MYH3P11055 1940 aa10.99□□□□□ -0.65
SDF2-204ENST00000587338 TESPA1A2RU30 521 aaPredicted RBP10.98□□□□□ -0.65
SDF2-204ENST00000587338 PI4KAP2A4QPH2 592 aa10.98□□□□□ -0.65
SDF2-204ENST00000587338 ITGA6P23229 1130 aa10.98□□□□□ -0.65
SDF2-204ENST00000587338 RBM5P52756 815 aaKnown RBP eCLIP10.98□□□□□ -0.65
SDF2-204ENST00000587338 NEXNQ0ZGT2 675 aa10.98□□□□□ -0.65
SDF2-204ENST00000587338 RASA3Q14644 834 aa10.98□□□□□ -0.65
SDF2-204ENST00000587338 RALBP1Q15311 655 aa10.98□□□□□ -0.65
SDF2-204ENST00000587338 CWF19L2Q2TBE0 894 aaKnown RBP10.98□□□□□ -0.65
SDF2-204ENST00000587338 UBE3BQ7Z3V4 1068 aa10.98□□□□□ -0.65
SDF2-204ENST00000587338 PI4KAP1Q8N8J0 262 aa10.98□□□□□ -0.65
SDF2-204ENST00000587338 MTMR14Q8NCE2 650 aa10.98□□□□□ -0.65
SDF2-204ENST00000587338 SH3TC2Q8TF17 1288 aa10.98□□□□□ -0.65
SDF2-204ENST00000587338 OTUD5Q96G74 571 aa10.98□□□□□ -0.65
SDF2-204ENST00000587338 ZFYVE28Q9HCC9 887 aa10.98□□□□□ -0.65
SDF2-204ENST00000587338 JAG2Q9Y219 1238 aa10.98□□□□□ -0.65
SDF2-204ENST00000587338 CCL15-CCL14A0A0B4J2E2 113 aa10.97□□□□□ -0.65
SDF2-204ENST00000587338 SNAP23O00161 211 aa10.97□□□□□ -0.65
SDF2-204ENST00000587338 ZNF853P0CG23 659 aa10.97□□□□□ -0.65
SDF2-204ENST00000587338 CHRNDQ07001 517 aa10.97□□□□□ -0.65
SDF2-204ENST00000587338 CCL15Q16663 113 aa10.97□□□□□ -0.65
SDF2-204ENST00000587338 CCDC30Q5VVM6 783 aa10.97□□□□□ -0.65
SDF2-204ENST00000587338 KSR2Q6VAB6 950 aa10.97□□□□□ -0.65
SDF2-204ENST00000587338 CNKSR2Q8WXI2 1034 aa10.97□□□□□ -0.65
SDF2-204ENST00000587338 BRI3BPQ8WY22 251 aa10.97□□□□□ -0.65
SDF2-204ENST00000587338 MS4A4AQ96JQ5 239 aa10.97□□□□□ -0.65
SDF2-204ENST00000587338 PRMT6Q96LA8 375 aaPredicted RBP10.97□□□□□ -0.65
SDF2-204ENST00000587338 ECM29Q5VYK3 1845 aa10.97□□□□□ -0.65
SDF2-204ENST00000587338 OTOFQ9HC10 1997 aa10.97□□□□□ -0.65
SDF2-204ENST00000587338 NEURL1BA8MQ27 555 aa10.96□□□□□ -0.65
SDF2-204ENST00000587338 GNAI1P63096 354 aa10.96□□□□□ -0.65
SDF2-204ENST00000587338 C8orf58Q8NAV2 365 aa10.96□□□□□ -0.65
SDF2-204ENST00000587338 DPF3Q92784 378 aa10.96□□□□□ -0.65
SDF2-204ENST00000587338 IFT57Q9NWB7 429 aa10.96□□□□□ -0.65
SDF2-204ENST00000587338 RBM27Q9P2N5 1060 aaKnown RBP10.96□□□□□ -0.65
SDF2-204ENST00000587338 LAMA3Q16787 3333 aa10.96□□□□□ -0.66
SDF2-204ENST00000587338 MYBBP1AQ9BQG0 1328 aaKnown RBP10.95□□□□□ -0.66
SDF2-204ENST00000587338 DLL1O00548 723 aa10.95□□□□□ -0.66
SDF2-204ENST00000587338 TAF5LO75529 589 aa10.95□□□□□ -0.66
SDF2-204ENST00000587338 ECM2O94769 699 aaPredicted RBP10.95□□□□□ -0.66
SDF2-204ENST00000587338 GTF2A2P52657 109 aa10.95□□□□□ -0.66
SDF2-204ENST00000587338 TNFAIP1Q13829 316 aa10.95□□□□□ -0.66
SDF2-204ENST00000587338 KIF22Q14807 665 aa10.95□□□□□ -0.66
SDF2-204ENST00000587338 ZNF804AQ7Z570 1209 aa10.95□□□□□ -0.66
SDF2-204ENST00000587338 FAM43AQ8N2R8 423 aa10.95□□□□□ -0.66
SDF2-204ENST00000587338 SLC17A8Q8NDX2 589 aa10.95□□□□□ -0.66
SDF2-204ENST00000587338 HELBQ8NG08 1087 aaPredicted RBP10.95□□□□□ -0.66
SDF2-204ENST00000587338 ARHGAP39Q9C0H5 1083 aa10.95□□□□□ -0.66
SDF2-204ENST00000587338 ADAMTS8Q9UP79 889 aa10.95□□□□□ -0.66
SDF2-204ENST00000587338 IRS2Q9Y4H2 1338 aa10.94□□□□□ -0.66
SDF2-204ENST00000587338 H7C1W4 665 aa10.94□□□□□ -0.66
SDF2-204ENST00000587338 WDHD1O75717 1129 aaPredicted RBP10.94□□□□□ -0.66
SDF2-204ENST00000587338 CALD1Q05682 793 aaKnown RBP10.94□□□□□ -0.66
SDF2-204ENST00000587338 VGLL4Q14135 290 aa10.94□□□□□ -0.66
SDF2-204ENST00000587338 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.94□□□□□ -0.66
SDF2-204ENST00000587338 CDAN1Q8IWY9 1227 aa10.94□□□□□ -0.66
SDF2-204ENST00000587338 STK31Q9BXU1 1019 aa10.94□□□□□ -0.66
SDF2-204ENST00000587338 CHMP4AQ9BY43 222 aa10.94□□□□□ -0.66
SDF2-204ENST00000587338 ZNF70Q9UC06 446 aaPredicted RBP10.94□□□□□ -0.66
SDF2-204ENST00000587338 CSADQ9Y600 493 aa10.94□□□□□ -0.66
SDF2-204ENST00000587338 ZSWIM8A7E2V4 1837 aa10.93□□□□□ -0.66
SDF2-204ENST00000587338 ANKRD18BA2A2Z9 1011 aa10.93□□□□□ -0.66
SDF2-204ENST00000587338 ANP32CO43423 234 aa10.93□□□□□ -0.66
SDF2-204ENST00000587338 IL1R1P14778 569 aa10.93□□□□□ -0.66
SDF2-204ENST00000587338 FKBP1AP62942 108 aaKnown RBP10.93□□□□□ -0.66
SDF2-204ENST00000587338 MAP3K9P80192 1104 aa10.93□□□□□ -0.66
SDF2-204ENST00000587338 LACTBP83111 547 aaPredicted RBP10.93□□□□□ -0.66
SDF2-204ENST00000587338 GCKRQ14397 625 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms