RNA–Protein interactions for RNA: ENST00000587256.1

ATG4D-207, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-207ENST00000587256 KRT26Q7Z3Y9 468 aa18.4■□□□□ 0.54
ATG4D-207ENST00000587256 CERS5Q8N5B7 392 aa18.4■□□□□ 0.54
ATG4D-207ENST00000587256 TDRD7Q8NHU6 1098 aaKnown RBP18.4■□□□□ 0.54
ATG4D-207ENST00000587256 ZNF408Q9H9D4 720 aa18.4■□□□□ 0.54
ATG4D-207ENST00000587256 ASTN2O75129 1339 aaPredicted RBP18.4■□□□□ 0.54
ATG4D-207ENST00000587256 ARAP2Q8WZ64 1704 aa18.4■□□□□ 0.54
ATG4D-207ENST00000587256 PNMA6EA0A0J9YXQ4 647 aa18.39■□□□□ 0.53
ATG4D-207ENST00000587256 F8W031 263 aaPredicted RBP18.39■□□□□ 0.53
ATG4D-207ENST00000587256 MMP14P50281 582 aa18.39■□□□□ 0.53
ATG4D-207ENST00000587256 CHAF1AQ13111 956 aaPredicted RBP18.39■□□□□ 0.53
ATG4D-207ENST00000587256 MFSD14BQ5SR56 506 aa18.39■□□□□ 0.53
ATG4D-207ENST00000587256 ANGEL2Q5VTE6 544 aaKnown RBP18.39■□□□□ 0.53
ATG4D-207ENST00000587256 FBXO33Q7Z6M2 555 aa18.39■□□□□ 0.53
ATG4D-207ENST00000587256 USP48Q86UV5 1035 aa18.39■□□□□ 0.53
ATG4D-207ENST00000587256 SULF1Q8IWU6 871 aa18.39■□□□□ 0.53
ATG4D-207ENST00000587256 DNAJC5GQ8N7S2 189 aa18.39■□□□□ 0.53
ATG4D-207ENST00000587256 MKRN1Q9UHC7 482 aaKnown RBP18.39■□□□□ 0.53
ATG4D-207ENST00000587256 ABT1Q9ULW3 272 aaKnown RBP18.39■□□□□ 0.53
ATG4D-207ENST00000587256 FAM205AQ6ZU69 1335 aa18.39■□□□□ 0.53
ATG4D-207ENST00000587256 TRPM7Q96QT4 1865 aa18.38■□□□□ 0.53
ATG4D-207ENST00000587256 ADM5C9JUS6 153 aa18.38■□□□□ 0.53
ATG4D-207ENST00000587256 ZBTB7BO15156 539 aaPredicted RBP18.38■□□□□ 0.53
ATG4D-207ENST00000587256 CELF2O95319 508 aaKnown RBP18.38■□□□□ 0.53
ATG4D-207ENST00000587256 BCAMP50895 628 aa18.38■□□□□ 0.53
ATG4D-207ENST00000587256 FKBP1AP62942 108 aaKnown RBP18.38■□□□□ 0.53
ATG4D-207ENST00000587256 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.37■□□□□ 0.53
ATG4D-207ENST00000587256 CNTNAP1P78357 1384 aa18.36■□□□□ 0.53
ATG4D-207ENST00000587256 G3BP1Q13283 466 aaKnown RBP eCLIP18.36■□□□□ 0.53
ATG4D-207ENST00000587256 MVPQ14764 893 aaKnown RBP18.36■□□□□ 0.53
ATG4D-207ENST00000587256 NBPF9Q3BBW0 867 aa18.36■□□□□ 0.53
ATG4D-207ENST00000587256 PITPNM2Q9BZ72 1349 aa18.35■□□□□ 0.53
ATG4D-207ENST00000587256 WNT10BO00744 389 aa18.35■□□□□ 0.53
ATG4D-207ENST00000587256 TFCP2Q12800 502 aa18.35■□□□□ 0.53
ATG4D-207ENST00000587256 OS9Q13438 667 aaPredicted RBP18.35■□□□□ 0.53
ATG4D-207ENST00000587256 DLGAP5Q15398 846 aa18.35■□□□□ 0.53
ATG4D-207ENST00000587256 PAXIP1Q6ZW49 1069 aaPredicted RBP18.35■□□□□ 0.53
ATG4D-207ENST00000587256 TBC1D22AQ8WUA7 517 aa18.35■□□□□ 0.53
ATG4D-207ENST00000587256 DDX19BQ9UMR2 479 aa18.35■□□□□ 0.53
ATG4D-207ENST00000587256 COG6Q9Y2V7 657 aa18.35■□□□□ 0.53
ATG4D-207ENST00000587256 MYH13Q9UKX3 1938 aa18.35■□□□□ 0.53
ATG4D-207ENST00000587256 RBM5P52756 815 aaKnown RBP eCLIP18.34■□□□□ 0.53
ATG4D-207ENST00000587256 ATP8B2P98198 1209 aa18.34■□□□□ 0.53
ATG4D-207ENST00000587256 POLA2Q14181 598 aa18.34■□□□□ 0.53
ATG4D-207ENST00000587256 CST9Q5W186 159 aa18.34■□□□□ 0.53
ATG4D-207ENST00000587256 DLK2Q6UY11 383 aa18.34■□□□□ 0.53
ATG4D-207ENST00000587256 GNL3LQ9NVN8 582 aaKnown RBP18.34■□□□□ 0.53
ATG4D-207ENST00000587256 TTF2Q9UNY4 1162 aaKnown RBP18.34■□□□□ 0.53
ATG4D-207ENST00000587256 AKAP2Q9Y2D5 859 aa18.34■□□□□ 0.53
ATG4D-207ENST00000587256 ADORA1P30542 326 aa18.33■□□□□ 0.52
ATG4D-207ENST00000587256 CFAP100Q494V2 611 aa18.33■□□□□ 0.52
ATG4D-207ENST00000587256 SSH3Q8TE77 659 aa18.33■□□□□ 0.52
ATG4D-207ENST00000587256 COL1A1P02452 1464 aaPredicted RBP18.33■□□□□ 0.52
ATG4D-207ENST00000587256 A0A1B0GUL7 405 aa18.32■□□□□ 0.52
ATG4D-207ENST00000587256 RASSF10A6NK89 507 aa18.32■□□□□ 0.52
ATG4D-207ENST00000587256 CEP85Q6P2H3 762 aa18.32■□□□□ 0.52
ATG4D-207ENST00000587256 CDCA5Q96FF9 252 aa18.32■□□□□ 0.52
ATG4D-207ENST00000587256 SCAF8Q9UPN6 1271 aaKnown RBP18.32■□□□□ 0.52
ATG4D-207ENST00000587256 TLL2Q9Y6L7 1015 aa18.32■□□□□ 0.52
ATG4D-207ENST00000587256 SPDYE2BA6NHP3 402 aa18.31■□□□□ 0.52
ATG4D-207ENST00000587256 MYO1BO43795 1136 aa18.31■□□□□ 0.52
ATG4D-207ENST00000587256 SURF6O75683 361 aaKnown RBP18.31■□□□□ 0.52
ATG4D-207ENST00000587256 SPDYE6P0CI01 402 aa18.31■□□□□ 0.52
ATG4D-207ENST00000587256 PHKA1P46020 1223 aa18.31■□□□□ 0.52
ATG4D-207ENST00000587256 DEFB115Q30KQ5 88 aa18.31■□□□□ 0.52
ATG4D-207ENST00000587256 APOBEC3FQ8IUX4 373 aaKnown RBP18.31■□□□□ 0.52
ATG4D-207ENST00000587256 JMYQ8N9B5 988 aa18.31■□□□□ 0.52
ATG4D-207ENST00000587256 MTMR14Q8NCE2 650 aa18.31■□□□□ 0.52
ATG4D-207ENST00000587256 ZBED3Q96IU2 234 aaPredicted RBP18.31■□□□□ 0.52
ATG4D-207ENST00000587256 NEUROD6Q96NK8 337 aa18.31■□□□□ 0.52
ATG4D-207ENST00000587256 CHMP4BQ9H444 224 aaKnown RBP18.31■□□□□ 0.52
ATG4D-207ENST00000587256 POLR2AP24928 1970 aaKnown RBP18.31■□□□□ 0.52
ATG4D-207ENST00000587256 TIMM10P62072 90 aa18.3■□□□□ 0.52
ATG4D-207ENST00000587256 GRM1Q13255 1194 aa18.3■□□□□ 0.52
ATG4D-207ENST00000587256 PDE3AQ14432 1141 aa18.3■□□□□ 0.52
ATG4D-207ENST00000587256 C20orf194Q5TEA3 1177 aa18.3■□□□□ 0.52
ATG4D-207ENST00000587256 CCDC102BQ68D86 513 aa18.3■□□□□ 0.52
ATG4D-207ENST00000587256 WDR66Q8TBY9 1149 aa18.3■□□□□ 0.52
ATG4D-207ENST00000587256 GBA2Q9HCG7 927 aaPredicted RBP18.3■□□□□ 0.52
ATG4D-207ENST00000587256 SERPINA10Q9UK55 444 aa18.3■□□□□ 0.52
ATG4D-207ENST00000587256 PCDHAC2Q9Y5I4 1007 aa18.3■□□□□ 0.52
ATG4D-207ENST00000587256 MAST3O60307 1309 aa18.29■□□□□ 0.52
ATG4D-207ENST00000587256 ECM29Q5VYK3 1845 aa18.29■□□□□ 0.52
ATG4D-207ENST00000587256 SEMA3EO15041 775 aa18.29■□□□□ 0.52
ATG4D-207ENST00000587256 VEGFBP49765 207 aa18.29■□□□□ 0.52
ATG4D-207ENST00000587256 GRIK5Q16478 980 aa18.29■□□□□ 0.52
ATG4D-207ENST00000587256 GORABQ5T7V8 394 aa18.29■□□□□ 0.52
ATG4D-207ENST00000587256 SAPCD2Q86UD0 394 aa18.29■□□□□ 0.52
ATG4D-207ENST00000587256 XAGE2Q96GT9 111 aa18.29■□□□□ 0.52
ATG4D-207ENST00000587256 DENND2AQ9ULE3 1009 aa18.29■□□□□ 0.52
ATG4D-207ENST00000587256 CLRN2A0PK11 232 aa18.28■□□□□ 0.52
ATG4D-207ENST00000587256 CRKP46108 304 aa18.28■□□□□ 0.52
ATG4D-207ENST00000587256 C2orf69Q8N8R5 385 aa18.28■□□□□ 0.52
ATG4D-207ENST00000587256 VEZTQ9HBM0 779 aa18.28■□□□□ 0.52
ATG4D-207ENST00000587256 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.28■□□□□ 0.52
ATG4D-207ENST00000587256 ECE1P42892 770 aa18.27■□□□□ 0.52
ATG4D-207ENST00000587256 HUNKP57058 714 aa18.27■□□□□ 0.52
ATG4D-207ENST00000587256 TEKT1Q969V4 418 aa18.27■□□□□ 0.52
ATG4D-207ENST00000587256 CAPNS2Q96L46 248 aa18.27■□□□□ 0.52
ATG4D-207ENST00000587256 PRMT6Q96LA8 375 aaPredicted RBP18.27■□□□□ 0.52
ATG4D-207ENST00000587256 ZBTB40Q9NUA8 1239 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms