RNA–Protein interactions for RNA: ENST00000586870.5

RETREG3-205, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 1,632 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-205ENST00000586870 ZNRF3Q9ULT6 936 aa22.28■■□□□ 1.16
RETREG3-205ENST00000586870 GLTPD2A6NH11 291 aa22.28■■□□□ 1.16
RETREG3-205ENST00000586870 ATP5JP18859 108 aa22.28■■□□□ 1.16
RETREG3-205ENST00000586870 DOK7Q18PE1 504 aa22.28■■□□□ 1.16
RETREG3-205ENST00000586870 KIAA1211Q6ZU35 1233 aa22.28■■□□□ 1.16
RETREG3-205ENST00000586870 RIPOR2Q9Y4F9 1068 aa22.28■■□□□ 1.16
RETREG3-205ENST00000586870 FZD9O00144 591 aa22.27■■□□□ 1.16
RETREG3-205ENST00000586870 CIAO1O76071 339 aa22.27■■□□□ 1.16
RETREG3-205ENST00000586870 HSPA4P34932 840 aa22.27■■□□□ 1.16
RETREG3-205ENST00000586870 DBNDD1Q9H9R9 158 aa22.27■■□□□ 1.16
RETREG3-205ENST00000586870 FBXO3Q9UK99 471 aa22.27■■□□□ 1.16
RETREG3-205ENST00000586870 MCM2P49736 904 aa22.26■■□□□ 1.15
RETREG3-205ENST00000586870 ATG9AQ7Z3C6 839 aa22.26■■□□□ 1.15
RETREG3-205ENST00000586870 LSG1Q9H089 658 aaKnown RBP22.26■■□□□ 1.15
RETREG3-205ENST00000586870 IL25Q9H293 177 aa22.26■■□□□ 1.15
RETREG3-205ENST00000586870 GJA3Q9Y6H8 435 aa22.26■■□□□ 1.15
RETREG3-205ENST00000586870 RAD50Q92878 1312 aa22.26■■□□□ 1.15
RETREG3-205ENST00000586870 WTIPA6NIX2 430 aaPredicted RBP22.25■■□□□ 1.15
RETREG3-205ENST00000586870 CWC27Q6UX04 472 aaKnown RBP22.25■■□□□ 1.15
RETREG3-205ENST00000586870 BOLA2Q9H3K6 86 aa22.25■■□□□ 1.15
RETREG3-205ENST00000586870 DBNLQ9UJU6 430 aaKnown RBP22.25■■□□□ 1.15
RETREG3-205ENST00000586870 DDNO94850 711 aaPredicted RBP22.24■■□□□ 1.15
RETREG3-205ENST00000586870 ECE2O60344 883 aa22.24■■□□□ 1.15
RETREG3-205ENST00000586870 CEP126Q9P2H0 1117 aa22.24■■□□□ 1.15
RETREG3-205ENST00000586870 PALD1Q9ULE6 856 aa22.24■■□□□ 1.15
RETREG3-205ENST00000586870 LRRC37AA6NMS7 1700 aa22.23■■□□□ 1.15
RETREG3-205ENST00000586870 SNAP23O00161 211 aa22.23■■□□□ 1.15
RETREG3-205ENST00000586870 PDE8BO95263 885 aa22.23■■□□□ 1.15
RETREG3-205ENST00000586870 UBE4AQ14139 1066 aa22.23■■□□□ 1.15
RETREG3-205ENST00000586870 TNIP1Q15025 636 aa22.23■■□□□ 1.15
RETREG3-205ENST00000586870 ZNF541Q9H0D2 1346 aa22.23■■□□□ 1.15
RETREG3-205ENST00000586870 RAD17O75943 681 aa22.22■■□□□ 1.15
RETREG3-205ENST00000586870 NEK4P51957 841 aa22.22■■□□□ 1.15
RETREG3-205ENST00000586870 SNRKQ9NRH2 765 aa22.22■■□□□ 1.15
RETREG3-205ENST00000586870 MED23Q9ULK4 1368 aa22.22■■□□□ 1.15
RETREG3-205ENST00000586870 CIAPIN1Q6FI81 312 aa22.21■■□□□ 1.15
RETREG3-205ENST00000586870 GPC2Q8N158 579 aa22.21■■□□□ 1.15
RETREG3-205ENST00000586870 DBNDD2Q9BQY9 259 aa22.21■■□□□ 1.15
RETREG3-205ENST00000586870 RRAGCQ9HB90 399 aa22.21■■□□□ 1.15
RETREG3-205ENST00000586870 RFX7Q2KHR2 1363 aa22.21■■□□□ 1.15
RETREG3-205ENST00000586870 SBF1O95248 1867 aa22.21■■□□□ 1.15
RETREG3-205ENST00000586870 DUOX1Q9NRD9 1551 aa22.21■■□□□ 1.15
RETREG3-205ENST00000586870 CXCL9Q07325 125 aa22.2■■□□□ 1.15
RETREG3-205ENST00000586870 PODNQ7Z5L7 613 aa22.2■■□□□ 1.15
RETREG3-205ENST00000586870 FSD1Q9BTV5 496 aa22.2■■□□□ 1.15
RETREG3-205ENST00000586870 COA1Q9GZY4 146 aa22.2■■□□□ 1.15
RETREG3-205ENST00000586870 ZNF804AQ7Z570 1209 aa22.2■■□□□ 1.14
RETREG3-205ENST00000586870 IFIT1P09914 478 aaKnown RBP22.19■■□□□ 1.14
RETREG3-205ENST00000586870 KLRK1P26718 216 aa22.19■■□□□ 1.14
RETREG3-205ENST00000586870 PUM3Q15397 648 aaKnown RBP22.19■■□□□ 1.14
RETREG3-205ENST00000586870 TXNRD3Q86VQ6 643 aa22.19■■□□□ 1.14
RETREG3-205ENST00000586870 TICAM2Q86XR7 235 aa22.19■■□□□ 1.14
RETREG3-205ENST00000586870 VPS37DQ86XT2 251 aa22.19■■□□□ 1.14
RETREG3-205ENST00000586870 FBXW7Q969H0 707 aa22.19■■□□□ 1.14
RETREG3-205ENST00000586870 HAUS7Q99871 368 aa22.19■■□□□ 1.14
RETREG3-205ENST00000586870 CWC22Q9HCG8 908 aaKnown RBP22.19■■□□□ 1.14
RETREG3-205ENST00000586870 NMRK2Q9NPI5 230 aa22.19■■□□□ 1.14
RETREG3-205ENST00000586870 YDJCA8MPS7 323 aa22.18■■□□□ 1.14
RETREG3-205ENST00000586870 VEGFAP15692 232 aaPredicted RBP22.18■■□□□ 1.14
RETREG3-205ENST00000586870 NMIQ13287 307 aaPredicted RBP22.18■■□□□ 1.14
RETREG3-205ENST00000586870 RAB3GAP1Q15042 981 aa22.18■■□□□ 1.14
RETREG3-205ENST00000586870 CAVIN4Q5BKX8 364 aa22.18■■□□□ 1.14
RETREG3-205ENST00000586870 SPEF2Q9C093 1822 aa22.18■■□□□ 1.14
RETREG3-205ENST00000586870 SLC5A1P13866 664 aa22.17■■□□□ 1.14
RETREG3-205ENST00000586870 LMOD1P29536 600 aaPredicted RBP22.17■■□□□ 1.14
RETREG3-205ENST00000586870 C15orf52Q6ZUT6 534 aaKnown RBP22.17■■□□□ 1.14
RETREG3-205ENST00000586870 FOXD4L1Q9NU39 408 aa22.17■■□□□ 1.14
RETREG3-205ENST00000586870 SNX14Q9Y5W7 946 aa22.17■■□□□ 1.14
RETREG3-205ENST00000586870 ZNF609O15014 1411 aa22.17■■□□□ 1.14
RETREG3-205ENST00000586870 IQCA1LA6NCM1 817 aa22.17■■□□□ 1.14
RETREG3-205ENST00000586870 MCM4P33991 863 aa22.17■■□□□ 1.14
RETREG3-205ENST00000586870 VGLL2Q8N8G2 317 aa22.17■■□□□ 1.14
RETREG3-205ENST00000586870 KCNB2Q92953 911 aa22.17■■□□□ 1.14
RETREG3-205ENST00000586870 NEUROD6Q96NK8 337 aa22.17■■□□□ 1.14
RETREG3-205ENST00000586870 KCNQ5Q9NR82 932 aa22.17■■□□□ 1.14
RETREG3-205ENST00000586870 AKAP2Q9Y2D5 859 aa22.17■■□□□ 1.14
RETREG3-205ENST00000586870 COL4A5P29400 1685 aa22.16■■□□□ 1.14
RETREG3-205ENST00000586870 CCDC88AQ3V6T2 1871 aa22.16■■□□□ 1.14
RETREG3-205ENST00000586870 HIBADHP31937 336 aaKnown RBP22.16■■□□□ 1.14
RETREG3-205ENST00000586870 DEKP35659 375 aaKnown RBP22.16■■□□□ 1.14
RETREG3-205ENST00000586870 ATP2B3Q16720 1220 aa22.16■■□□□ 1.14
RETREG3-205ENST00000586870 LPIN2Q92539 896 aa22.16■■□□□ 1.14
RETREG3-205ENST00000586870 CD209Q9NNX6 404 aa22.16■■□□□ 1.14
RETREG3-205ENST00000586870 CCDC171Q6TFL3 1326 aa22.15■■□□□ 1.14
RETREG3-205ENST00000586870 USP17L3A6NCW0 530 aa22.15■■□□□ 1.14
RETREG3-205ENST00000586870 USP17L4A6NCW7 530 aa22.15■■□□□ 1.14
RETREG3-205ENST00000586870 PSMD14O00487 310 aa22.15■■□□□ 1.14
RETREG3-205ENST00000586870 GYG1P46976 350 aa22.15■■□□□ 1.14
RETREG3-205ENST00000586870 USP17L1Q7RTZ2 530 aa22.15■■□□□ 1.14
RETREG3-205ENST00000586870 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.15■■□□□ 1.14
RETREG3-205ENST00000586870 FAM227BQ96M60 508 aa22.15■■□□□ 1.14
RETREG3-205ENST00000586870 PTH1RQ03431 593 aa22.14■■□□□ 1.14
RETREG3-205ENST00000586870 TIAM2Q8IVF5 1701 aa22.14■■□□□ 1.14
RETREG3-205ENST00000586870 HACL1Q9UJ83 578 aa22.14■■□□□ 1.14
RETREG3-205ENST00000586870 TIMM10P62072 90 aa22.13■■□□□ 1.13
RETREG3-205ENST00000586870 NUCB2P80303 420 aa22.13■■□□□ 1.13
RETREG3-205ENST00000586870 MAP4K1Q92918 833 aa22.13■■□□□ 1.13
RETREG3-205ENST00000586870 L3MBTL3Q96JM7 780 aaPredicted RBP22.13■■□□□ 1.13
RETREG3-205ENST00000586870 LTBP1Q14766 1721 aa22.13■■□□□ 1.13
RETREG3-205ENST00000586870 A0A1B0GUL7 405 aa22.13■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms