RNA–Protein interactions for RNA: ENST00000586417.5

ATG4D-204, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 2

Gene ATG4D, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-204ENST00000586417 TBC1D16Q8TBP0 767 aa24.59■■□□□ 1.53
ATG4D-204ENST00000586417 BCS1LQ9Y276 419 aa24.59■■□□□ 1.53
ATG4D-204ENST00000586417 SLC5A1P13866 664 aa24.58■■□□□ 1.53
ATG4D-204ENST00000586417 MCAMP43121 646 aa24.58■■□□□ 1.53
ATG4D-204ENST00000586417 CCDC102BQ68D86 513 aa24.58■■□□□ 1.53
ATG4D-204ENST00000586417 DPP8Q6V1X1 898 aaPredicted RBP24.58■■□□□ 1.53
ATG4D-204ENST00000586417 MAP4K1Q92918 833 aa24.58■■□□□ 1.53
ATG4D-204ENST00000586417 TMX4Q9H1E5 349 aaPredicted RBP24.58■■□□□ 1.53
ATG4D-204ENST00000586417 GGA1Q9UJY5 639 aa24.58■■□□□ 1.53
ATG4D-204ENST00000586417 LEMD3Q9Y2U8 911 aa24.58■■□□□ 1.53
ATG4D-204ENST00000586417 ARID4AP29374 1257 aaPredicted RBP24.57■■□□□ 1.52
ATG4D-204ENST00000586417 ZAP70P43403 619 aa24.57■■□□□ 1.52
ATG4D-204ENST00000586417 PHKA1P46020 1223 aa24.57■■□□□ 1.52
ATG4D-204ENST00000586417 FKBP4Q02790 459 aaKnown RBP eCLIP24.57■■□□□ 1.52
ATG4D-204ENST00000586417 PI16Q6UXB8 463 aa24.57■■□□□ 1.52
ATG4D-204ENST00000586417 KCNB2Q92953 911 aa24.57■■□□□ 1.52
ATG4D-204ENST00000586417 SNX14Q9Y5W7 946 aa24.57■■□□□ 1.52
ATG4D-204ENST00000586417 IRS2Q9Y4H2 1338 aa24.57■■□□□ 1.52
ATG4D-204ENST00000586417 C6orf229H3BNL8 230 aa24.57■■□□□ 1.52
ATG4D-204ENST00000586417 RASEFQ8IZ41 740 aa24.57■■□□□ 1.52
ATG4D-204ENST00000586417 SLKQ9H2G2 1235 aaPredicted RBP24.57■■□□□ 1.52
ATG4D-204ENST00000586417 ATP2B4P23634 1241 aa24.56■■□□□ 1.52
ATG4D-204ENST00000586417 GYG1P46976 350 aa24.56■■□□□ 1.52
ATG4D-204ENST00000586417 NECTIN1Q15223 517 aa24.56■■□□□ 1.52
ATG4D-204ENST00000586417 SEC62Q99442 399 aaKnown RBP24.56■■□□□ 1.52
ATG4D-204ENST00000586417 ST18O60284 1047 aa24.55■■□□□ 1.52
ATG4D-204ENST00000586417 BCAMP50895 628 aa24.55■■□□□ 1.52
ATG4D-204ENST00000586417 ZMYM1Q5SVZ6 1142 aa24.55■■□□□ 1.52
ATG4D-204ENST00000586417 RBM8AQ9Y5S9 174 aaKnown RBP24.55■■□□□ 1.52
ATG4D-204ENST00000586417 UQCRFS1P1P0C7P4 283 aa24.54■■□□□ 1.52
ATG4D-204ENST00000586417 SLFNL1Q499Z3 407 aa24.54■■□□□ 1.52
ATG4D-204ENST00000586417 MCMDC2Q4G0Z9 681 aa24.54■■□□□ 1.52
ATG4D-204ENST00000586417 SPRYD3Q8NCJ5 442 aa24.54■■□□□ 1.52
ATG4D-204ENST00000586417 RNF113AO15541 343 aaKnown RBP24.54■■□□□ 1.52
ATG4D-204ENST00000586417 CCDC93Q567U6 631 aa24.54■■□□□ 1.52
ATG4D-204ENST00000586417 CC2D2BQ6DHV5 1058 aa24.54■■□□□ 1.52
ATG4D-204ENST00000586417 FAM84BQ96KN1 310 aaPredicted RBP24.54■■□□□ 1.52
ATG4D-204ENST00000586417 HELLSQ9NRZ9 838 aa24.54■■□□□ 1.52
ATG4D-204ENST00000586417 ARFGEF1Q9Y6D6 1849 aa24.53■■□□□ 1.52
ATG4D-204ENST00000586417 NEK4P51957 841 aa24.53■■□□□ 1.52
ATG4D-204ENST00000586417 CCDC129Q6ZRS4 1044 aa24.52■■□□□ 1.52
ATG4D-204ENST00000586417 ANP32EQ9BTT0 268 aa24.52■■□□□ 1.52
ATG4D-204ENST00000586417 MYH7P12883 1935 aa24.52■■□□□ 1.52
ATG4D-204ENST00000586417 RIMBP2O15034 1052 aa24.52■■□□□ 1.52
ATG4D-204ENST00000586417 CYP2E1P05181 493 aaPredicted RBP24.52■■□□□ 1.52
ATG4D-204ENST00000586417 RTFDC1Q9BY42 306 aaPredicted RBP24.52■■□□□ 1.52
ATG4D-204ENST00000586417 FER1L6Q2WGJ9 1857 aa24.51■■□□□ 1.51
ATG4D-204ENST00000586417 DDIT3P35638 169 aa24.51■■□□□ 1.51
ATG4D-204ENST00000586417 HMG20BQ9P0W2 317 aa24.51■■□□□ 1.51
ATG4D-204ENST00000586417 IQSEC3Q9UPP2 1182 aaPredicted RBP24.51■■□□□ 1.51
ATG4D-204ENST00000586417 CREB3L3Q68CJ9 461 aa24.5■■□□□ 1.51
ATG4D-204ENST00000586417 C15orf52Q6ZUT6 534 aaKnown RBP24.5■■□□□ 1.51
ATG4D-204ENST00000586417 FBXO33Q7Z6M2 555 aa24.5■■□□□ 1.51
ATG4D-204ENST00000586417 RTKN2Q8IZC4 609 aa24.5■■□□□ 1.51
ATG4D-204ENST00000586417 UPF3BQ9BZI7 483 aaKnown RBP24.5■■□□□ 1.51
ATG4D-204ENST00000586417 MAST3O60307 1309 aa24.5■■□□□ 1.51
ATG4D-204ENST00000586417 ZFYP08048 801 aaPredicted RBP24.49■■□□□ 1.51
ATG4D-204ENST00000586417 LRRFIP1Q32MZ4 808 aaKnown RBP24.49■■□□□ 1.51
ATG4D-204ENST00000586417 SLC27A2O14975 620 aa24.49■■□□□ 1.51
ATG4D-204ENST00000586417 HIBADHP31937 336 aaKnown RBP24.49■■□□□ 1.51
ATG4D-204ENST00000586417 RASGRF1Q13972 1273 aa24.49■■□□□ 1.51
ATG4D-204ENST00000586417 WASHC4Q2M389 1173 aa24.49■■□□□ 1.51
ATG4D-204ENST00000586417 CAVIN4Q5BKX8 364 aa24.49■■□□□ 1.51
ATG4D-204ENST00000586417 IL27Q8NEV9 243 aa24.49■■□□□ 1.51
ATG4D-204ENST00000586417 PIH1D3Q9NQM4 214 aaKnown RBP24.49■■□□□ 1.51
ATG4D-204ENST00000586417 TTF1Q15361 905 aaPredicted RBP24.48■■□□□ 1.51
ATG4D-204ENST00000586417 SOGA3Q5TF21 947 aa24.48■■□□□ 1.51
ATG4D-204ENST00000586417 MYO5AQ9Y4I1 1855 aaKnown RBP24.48■■□□□ 1.51
ATG4D-204ENST00000586417 VPS37DQ86XT2 251 aa24.47■■□□□ 1.51
ATG4D-204ENST00000586417 SPATA5Q8NB90 893 aa24.47■■□□□ 1.51
ATG4D-204ENST00000586417 OSBP2Q969R2 916 aa24.47■■□□□ 1.51
ATG4D-204ENST00000586417 PSMD1Q99460 953 aa24.47■■□□□ 1.51
ATG4D-204ENST00000586417 ZC3H12CQ9C0D7 883 aaKnown RBP24.47■■□□□ 1.51
ATG4D-204ENST00000586417 DOCK2Q92608 1830 aa24.47■■□□□ 1.51
ATG4D-204ENST00000586417 M0R2C6 588 aa24.47■■□□□ 1.51
ATG4D-204ENST00000586417 NFKBIEO00221 500 aa24.47■■□□□ 1.51
ATG4D-204ENST00000586417 CHD4Q14839 1912 aa24.46■■□□□ 1.51
ATG4D-204ENST00000586417 YBX3P16989 372 aaKnown RBP eCLIP24.46■■□□□ 1.51
ATG4D-204ENST00000586417 MCM2P49736 904 aa24.46■■□□□ 1.51
ATG4D-204ENST00000586417 AOC3Q16853 763 aa24.46■■□□□ 1.51
ATG4D-204ENST00000586417 ADCK5Q3MIX3 580 aa24.46■■□□□ 1.51
ATG4D-204ENST00000586417 GRIPAP1Q4V328 841 aa24.46■■□□□ 1.51
ATG4D-204ENST00000586417 TTC14Q96N46 770 aa24.46■■□□□ 1.51
ATG4D-204ENST00000586417 TM6SF1Q9BZW5 370 aa24.46■■□□□ 1.51
ATG4D-204ENST00000586417 ZNF277Q9NRM2 450 aaPredicted RBP24.46■■□□□ 1.51
ATG4D-204ENST00000586417 RPAP1Q9BWH6 1393 aaPredicted RBP24.45■■□□□ 1.5
ATG4D-204ENST00000586417 DOK7Q18PE1 504 aa24.45■■□□□ 1.5
ATG4D-204ENST00000586417 APPBP2Q92624 585 aa24.45■■□□□ 1.5
ATG4D-204ENST00000586417 EYA3Q99504 573 aa24.45■■□□□ 1.5
ATG4D-204ENST00000586417 U3KPZ7 1027 aaPredicted RBP24.45■■□□□ 1.5
ATG4D-204ENST00000586417 ZKSCAN1P17029 563 aaPredicted RBP24.44■■□□□ 1.5
ATG4D-204ENST00000586417 ADD2P35612 726 aa24.44■■□□□ 1.5
ATG4D-204ENST00000586417 ZNF804AQ7Z570 1209 aa24.44■■□□□ 1.5
ATG4D-204ENST00000586417 DSCC1Q9BVC3 393 aa24.44■■□□□ 1.5
ATG4D-204ENST00000586417 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.44■■□□□ 1.51e-6■■■■■ 36.3
ATG4D-204ENST00000586417 TAF6LQ9Y6J9 622 aa24.44■■□□□ 1.5
ATG4D-204ENST00000586417 MYH13Q9UKX3 1938 aa24.44■■□□□ 1.5
ATG4D-204ENST00000586417 COL1A1P02452 1464 aaPredicted RBP24.44■■□□□ 1.5
ATG4D-204ENST00000586417 TSGA10IPQ3SY00 556 aa24.44■■□□□ 1.5
ATG4D-204ENST00000586417 VPS53Q5VIR6 699 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms