RNA–Protein interactions for RNA: ENST00000586058.1

LIG3-206, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-206ENST00000586058 HSCBQ8IWL3 235 aa7.46□□□□□ -1.22
LIG3-206ENST00000586058 IL27Q8NEV9 243 aa7.46□□□□□ -1.22
LIG3-206ENST00000586058 CAMKK2Q96RR4 588 aa7.46□□□□□ -1.22
LIG3-206ENST00000586058 ESYT1Q9BSJ8 1104 aa7.46□□□□□ -1.22
LIG3-206ENST00000586058 ANKIB1Q9P2G1 1089 aa7.46□□□□□ -1.22
LIG3-206ENST00000586058 CDK5RAP2Q96SN8 1893 aa7.46□□□□□ -1.22
LIG3-206ENST00000586058 XDHP47989 1333 aa7.46□□□□□ -1.22
LIG3-206ENST00000586058 ARFGEF1Q9Y6D6 1849 aa7.45□□□□□ -1.22
LIG3-206ENST00000586058 GOLIM4O00461 696 aa7.45□□□□□ -1.22
LIG3-206ENST00000586058 ST18O60284 1047 aa7.45□□□□□ -1.22
LIG3-206ENST00000586058 ALDH1B1P30837 517 aa7.45□□□□□ -1.22
LIG3-206ENST00000586058 TIMM10P62072 90 aa7.45□□□□□ -1.22
LIG3-206ENST00000586058 WASHC4Q2M389 1173 aa7.45□□□□□ -1.22
LIG3-206ENST00000586058 CWC27Q6UX04 472 aaKnown RBP7.45□□□□□ -1.22
LIG3-206ENST00000586058 AMIGO3Q86WK7 504 aa7.45□□□□□ -1.22
LIG3-206ENST00000586058 KBTBD3Q8NAB2 608 aa7.45□□□□□ -1.22
LIG3-206ENST00000586058 SLC16A10Q8TF71 515 aa7.45□□□□□ -1.22
LIG3-206ENST00000586058 ZNF512BQ96KM6 892 aaPredicted RBP7.45□□□□□ -1.22
LIG3-206ENST00000586058 IPO9Q96P70 1041 aaKnown RBP7.45□□□□□ -1.22
LIG3-206ENST00000586058 BRIP1Q9BX63 1249 aa7.45□□□□□ -1.22
LIG3-206ENST00000586058 PCDH10Q9P2E7 1040 aa7.45□□□□□ -1.22
LIG3-206ENST00000586058 COL4A1P02462 1669 aa7.44□□□□□ -1.22
LIG3-206ENST00000586058 SLX4Q8IY92 1834 aa7.44□□□□□ -1.22
LIG3-206ENST00000586058 G3V3G9 751 aa7.44□□□□□ -1.22
LIG3-206ENST00000586058 H0YIN7 160 aa7.44□□□□□ -1.22
LIG3-206ENST00000586058 PPEF1O14829 653 aaPredicted RBP7.44□□□□□ -1.22
LIG3-206ENST00000586058 SEMA3EO15041 775 aa7.44□□□□□ -1.22
LIG3-206ENST00000586058 TAF5LO75529 589 aa7.44□□□□□ -1.22
LIG3-206ENST00000586058 BBOX1O75936 387 aa7.44□□□□□ -1.22
LIG3-206ENST00000586058 HSP90AA1P07900 732 aaKnown RBP7.44□□□□□ -1.22
LIG3-206ENST00000586058 NPR1P16066 1061 aa7.44□□□□□ -1.22
LIG3-206ENST00000586058 ZKSCAN1P17029 563 aaPredicted RBP7.44□□□□□ -1.22
LIG3-206ENST00000586058 POLD1P28340 1107 aa7.44□□□□□ -1.22
LIG3-206ENST00000586058 ARID4AP29374 1257 aaPredicted RBP7.44□□□□□ -1.22
LIG3-206ENST00000586058 TM4SF1P30408 202 aa7.44□□□□□ -1.22
LIG3-206ENST00000586058 RBM25P49756 843 aaKnown RBP7.44□□□□□ -1.22
LIG3-206ENST00000586058 CRY2Q49AN0 593 aa7.44□□□□□ -1.22
LIG3-206ENST00000586058 CCDC102BQ68D86 513 aa7.44□□□□□ -1.22
LIG3-206ENST00000586058 MSL1Q68DK7 614 aa7.44□□□□□ -1.22
LIG3-206ENST00000586058 ZNF804AQ7Z570 1209 aa7.44□□□□□ -1.22
LIG3-206ENST00000586058 KLHL34Q8N239 644 aa7.44□□□□□ -1.22
LIG3-206ENST00000586058 CCDC24Q8N4L8 307 aa7.44□□□□□ -1.22
LIG3-206ENST00000586058 ZGPATQ8N5A5 531 aaKnown RBP7.44□□□□□ -1.22
LIG3-206ENST00000586058 VGLL2Q8N8G2 317 aa7.44□□□□□ -1.22
LIG3-206ENST00000586058 HELBQ8NG08 1087 aaPredicted RBP7.44□□□□□ -1.22
LIG3-206ENST00000586058 CELF1Q92879 486 aaKnown RBP7.44□□□□□ -1.22
LIG3-206ENST00000586058 CRAMP1Q96RY5 1269 aa7.44□□□□□ -1.22
LIG3-206ENST00000586058 LEMD3Q9Y2U8 911 aa7.44□□□□□ -1.22
LIG3-206ENST00000586058 MYH1P12882 1939 aa7.44□□□□□ -1.22
LIG3-206ENST00000586058 BAZ2AQ9UIF9 1905 aaKnown RBP7.44□□□□□ -1.22
LIG3-206ENST00000586058 SGSM2O43147 1006 aa7.43□□□□□ -1.22
LIG3-206ENST00000586058 ATP2B4P23634 1241 aa7.43□□□□□ -1.22
LIG3-206ENST00000586058 ADORA1P30542 326 aa7.43□□□□□ -1.22
LIG3-206ENST00000586058 ANAPC15P60006 121 aa7.43□□□□□ -1.22
LIG3-206ENST00000586058 DDR1Q08345 913 aa7.43□□□□□ -1.22
LIG3-206ENST00000586058 MAP3K12Q12852 859 aa7.43□□□□□ -1.22
LIG3-206ENST00000586058 NMIQ13287 307 aaPredicted RBP7.43□□□□□ -1.22
LIG3-206ENST00000586058 RABEP1Q15276 862 aa7.43□□□□□ -1.22
LIG3-206ENST00000586058 DEFB132Q7Z7B7 95 aa7.43□□□□□ -1.22
LIG3-206ENST00000586058 ILDR1Q86SU0 546 aaPredicted RBP7.43□□□□□ -1.22
LIG3-206ENST00000586058 MASTLQ96GX5 879 aa7.43□□□□□ -1.22
LIG3-206ENST00000586058 ANO8Q9HCE9 1232 aaPredicted RBP7.43□□□□□ -1.22
LIG3-206ENST00000586058 HELLSQ9NRZ9 838 aa7.43□□□□□ -1.22
LIG3-206ENST00000586058 DENND2AQ9ULE3 1009 aa7.43□□□□□ -1.22
LIG3-206ENST00000586058 MINPP1Q9UNW1 487 aa7.43□□□□□ -1.22
LIG3-206ENST00000586058 EP400Q96L91 3159 aa7.43□□□□□ -1.22
LIG3-206ENST00000586058 ZNF804BA4D1E1 1349 aa7.43□□□□□ -1.22
LIG3-206ENST00000586058 CCDC171Q6TFL3 1326 aa7.43□□□□□ -1.22
LIG3-206ENST00000586058 C10orf71Q711Q0 1435 aa7.43□□□□□ -1.22
LIG3-206ENST00000586058 IDH1O75874 414 aaKnown RBP7.42□□□□□ -1.22
LIG3-206ENST00000586058 UFL1O94874 794 aa7.42□□□□□ -1.22
LIG3-206ENST00000586058 FGFR2P21802 821 aa7.42□□□□□ -1.22
LIG3-206ENST00000586058 MCMDC2Q4G0Z9 681 aa7.42□□□□□ -1.22
LIG3-206ENST00000586058 SPTY2D1Q68D10 685 aaPredicted RBP7.42□□□□□ -1.22
LIG3-206ENST00000586058 C3orf67Q6ZVT6 689 aa7.42□□□□□ -1.22
LIG3-206ENST00000586058 SPATA5Q8NB90 893 aa7.42□□□□□ -1.22
LIG3-206ENST00000586058 SLAIN1Q8ND83 568 aa7.42□□□□□ -1.22
LIG3-206ENST00000586058 CNKSR1Q969H4 720 aa7.42□□□□□ -1.22
LIG3-206ENST00000586058 ZNF622Q969S3 477 aaKnown RBP eCLIP7.42□□□□□ -1.22
LIG3-206ENST00000586058 EYA3Q99504 573 aa7.42□□□□□ -1.22
LIG3-206ENST00000586058 NOL10Q9BSC4 688 aaKnown RBP7.42□□□□□ -1.22
LIG3-206ENST00000586058 LRP2BPQ9P2M1 347 aa7.42□□□□□ -1.22
LIG3-206ENST00000586058 GGA1Q9UJY5 639 aa7.42□□□□□ -1.22
LIG3-206ENST00000586058 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.42□□□□□ -1.22
LIG3-206ENST00000586058 PDS5AQ29RF7 1337 aaKnown RBP7.42□□□□□ -1.22
LIG3-206ENST00000586058 MED23Q9ULK4 1368 aa7.42□□□□□ -1.22
LIG3-206ENST00000586058 TIAM2Q8IVF5 1701 aa7.41□□□□□ -1.22
LIG3-206ENST00000586058 FER1L6Q2WGJ9 1857 aa7.41□□□□□ -1.22
LIG3-206ENST00000586058 MYH6P13533 1939 aa7.41□□□□□ -1.22
LIG3-206ENST00000586058 RNF113AO15541 343 aaKnown RBP7.41□□□□□ -1.22
LIG3-206ENST00000586058 IGSF3O75054 1194 aa7.41□□□□□ -1.22
LIG3-206ENST00000586058 HOXA10P31260 410 aaPredicted RBP7.41□□□□□ -1.22
LIG3-206ENST00000586058 HIBADHP31937 336 aaKnown RBP7.41□□□□□ -1.22
LIG3-206ENST00000586058 MCAMP43121 646 aa7.41□□□□□ -1.22
LIG3-206ENST00000586058 ZAP70P43403 619 aa7.41□□□□□ -1.22
LIG3-206ENST00000586058 PHKA1P46020 1223 aa7.41□□□□□ -1.22
LIG3-206ENST00000586058 KRT32Q14532 448 aa7.41□□□□□ -1.22
LIG3-206ENST00000586058 GSE1Q14687 1217 aa7.41□□□□□ -1.22
LIG3-206ENST00000586058 GRIPAP1Q4V328 841 aa7.41□□□□□ -1.22
LIG3-206ENST00000586058 STYK1Q6J9G0 422 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms