RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 STAP2Q9UGK3 403 aa15.44■□□□□ 0.06
VMP1-202ENST00000585847 MYH13Q9UKX3 1938 aa15.44■□□□□ 0.06
VMP1-202ENST00000585847 COL1A1P02452 1464 aaPredicted RBP15.44■□□□□ 0.06
VMP1-202ENST00000585847 ZNF541Q9H0D2 1346 aa15.43■□□□□ 0.06
VMP1-202ENST00000585847 ZBTB22O15209 634 aa15.43■□□□□ 0.06
VMP1-202ENST00000585847 HIBADHP31937 336 aaKnown RBP15.43■□□□□ 0.06
VMP1-202ENST00000585847 AACSQ86V21 672 aa15.43■□□□□ 0.06
VMP1-202ENST00000585847 NIM1KQ8IY84 436 aa15.43■□□□□ 0.06
VMP1-202ENST00000585847 NEUROD6Q96NK8 337 aa15.43■□□□□ 0.06
VMP1-202ENST00000585847 SALL3Q9BXA9 1300 aa15.43■□□□□ 0.06
VMP1-202ENST00000585847 ERC2O15083 957 aa15.42■□□□□ 0.06
VMP1-202ENST00000585847 MX1P20591 662 aa15.42■□□□□ 0.06
VMP1-202ENST00000585847 PDE4AP27815 886 aa15.42■□□□□ 0.06
VMP1-202ENST00000585847 CCDC102BQ68D86 513 aa15.42■□□□□ 0.06
VMP1-202ENST00000585847 OTUD7AQ8TE49 926 aaPredicted RBP15.42■□□□□ 0.06
VMP1-202ENST00000585847 ZNRF3Q9ULT6 936 aa15.42■□□□□ 0.06
VMP1-202ENST00000585847 CXCL9Q07325 125 aa15.41■□□□□ 0.06
VMP1-202ENST00000585847 SCARF1Q14162 830 aa15.41■□□□□ 0.06
VMP1-202ENST00000585847 CASC1Q6TDU7 716 aa15.41■□□□□ 0.06
VMP1-202ENST00000585847 ZNF804AQ7Z570 1209 aa15.41■□□□□ 0.06
VMP1-202ENST00000585847 PODNQ7Z5L7 613 aa15.41■□□□□ 0.06
VMP1-202ENST00000585847 PLEKHM2Q8IWE5 1019 aa15.41■□□□□ 0.06
VMP1-202ENST00000585847 IQSEC3Q9UPP2 1182 aaPredicted RBP15.41■□□□□ 0.06
VMP1-202ENST00000585847 MYO5AQ9Y4I1 1855 aaKnown RBP15.4■□□□□ 0.06
VMP1-202ENST00000585847 ARID4AP29374 1257 aaPredicted RBP15.4■□□□□ 0.06
VMP1-202ENST00000585847 JDP2Q8WYK2 163 aa15.4■□□□□ 0.06
VMP1-202ENST00000585847 BACH2Q9BYV9 841 aa15.4■□□□□ 0.06
VMP1-202ENST00000585847 UPF2Q9HAU5 1272 aaKnown RBP15.4■□□□□ 0.06
VMP1-202ENST00000585847 PCNTO95613 3336 aa15.4■□□□□ 0.06
VMP1-202ENST00000585847 PSMD14O00487 310 aa15.39■□□□□ 0.05
VMP1-202ENST00000585847 RAD17O75943 681 aa15.39■□□□□ 0.05
VMP1-202ENST00000585847 GLRX3O76003 335 aaKnown RBP15.39■□□□□ 0.05
VMP1-202ENST00000585847 IFIT2P09913 472 aaKnown RBP15.39■□□□□ 0.05
VMP1-202ENST00000585847 PDE1AP54750 535 aa15.39■□□□□ 0.05
VMP1-202ENST00000585847 CAVIN4Q5BKX8 364 aa15.39■□□□□ 0.05
VMP1-202ENST00000585847 DACT2Q5SW24 774 aa15.39■□□□□ 0.05
VMP1-202ENST00000585847 MXD3Q9BW11 206 aa15.39■□□□□ 0.05
VMP1-202ENST00000585847 FAM205AQ6ZU69 1335 aa15.39■□□□□ 0.05
VMP1-202ENST00000585847 VIL1P09327 827 aaKnown RBP15.38■□□□□ 0.05
VMP1-202ENST00000585847 HSPA1AP0DMV8 641 aaKnown RBP15.38■□□□□ 0.05
VMP1-202ENST00000585847 HSPA1BP0DMV9 641 aaKnown RBP15.38■□□□□ 0.05
VMP1-202ENST00000585847 MCAMP43121 646 aa15.38■□□□□ 0.05
VMP1-202ENST00000585847 GTF2IP78347 998 aa15.38■□□□□ 0.05
VMP1-202ENST00000585847 RASGRF1Q13972 1273 aa15.38■□□□□ 0.05
VMP1-202ENST00000585847 TTC22Q5TAA0 569 aa15.38■□□□□ 0.05
VMP1-202ENST00000585847 PI16Q6UXB8 463 aa15.38■□□□□ 0.05
VMP1-202ENST00000585847 CERS5Q8N5B7 392 aa15.38■□□□□ 0.05
VMP1-202ENST00000585847 ZNF512BQ96KM6 892 aaPredicted RBP15.38■□□□□ 0.05
VMP1-202ENST00000585847 BCL11AQ9H165 835 aa15.38■□□□□ 0.05
VMP1-202ENST00000585847 JAG2Q9Y219 1238 aa15.38■□□□□ 0.05
VMP1-202ENST00000585847 DDNO94850 711 aaPredicted RBP15.37■□□□□ 0.05
VMP1-202ENST00000585847 GRIK5Q16478 980 aa15.37■□□□□ 0.05
VMP1-202ENST00000585847 CIAPIN1Q6FI81 312 aa15.37■□□□□ 0.05
VMP1-202ENST00000585847 GMLQ99445 158 aa15.37■□□□□ 0.05
VMP1-202ENST00000585847 ECHDC1Q9NTX5 307 aa15.37■□□□□ 0.05
VMP1-202ENST00000585847 HMG20BQ9P0W2 317 aa15.37■□□□□ 0.05
VMP1-202ENST00000585847 USP17L3A6NCW0 530 aa15.36■□□□□ 0.05
VMP1-202ENST00000585847 USP17L4A6NCW7 530 aa15.36■□□□□ 0.05
VMP1-202ENST00000585847 G3V3G9 751 aa15.36■□□□□ 0.05
VMP1-202ENST00000585847 CDC45O75419 566 aa15.36■□□□□ 0.05
VMP1-202ENST00000585847 EIF6P56537 245 aaKnown RBP15.36■□□□□ 0.05
VMP1-202ENST00000585847 DCAF8Q5TAQ9 597 aa15.36■□□□□ 0.05
VMP1-202ENST00000585847 STRIP1Q5VSL9 837 aa15.36■□□□□ 0.05
VMP1-202ENST00000585847 TSHZ3Q63HK5 1081 aa15.36■□□□□ 0.05
VMP1-202ENST00000585847 TTLL5Q6EMB2 1281 aa15.36■□□□□ 0.05
VMP1-202ENST00000585847 USP17L1Q7RTZ2 530 aa15.36■□□□□ 0.05
VMP1-202ENST00000585847 VPS37DQ86XT2 251 aa15.36■□□□□ 0.05
VMP1-202ENST00000585847 ZBTB12Q9Y330 459 aaPredicted RBP15.36■□□□□ 0.05
VMP1-202ENST00000585847 POTECB2RU33 542 aa15.35■□□□□ 0.05
VMP1-202ENST00000585847 SEMA3EO15041 775 aa15.35■□□□□ 0.05
VMP1-202ENST00000585847 C8orf34Q49A92 452 aa15.35■□□□□ 0.05
VMP1-202ENST00000585847 CCDC158Q5M9N0 1113 aa15.35■□□□□ 0.05
VMP1-202ENST00000585847 TTC39AQ5SRH9 613 aa15.35■□□□□ 0.05
VMP1-202ENST00000585847 SKAP1Q86WV1 359 aa15.35■□□□□ 0.05
VMP1-202ENST00000585847 PI4K2BQ8TCG2 481 aa15.35■□□□□ 0.05
VMP1-202ENST00000585847 NDUFB9Q9Y6M9 179 aa15.35■□□□□ 0.05
VMP1-202ENST00000585847 RFX7Q2KHR2 1363 aa15.35■□□□□ 0.05
VMP1-202ENST00000585847 DOCK2Q92608 1830 aa15.34■□□□□ 0.05
VMP1-202ENST00000585847 SHTN1A0MZ66 631 aa15.34■□□□□ 0.05
VMP1-202ENST00000585847 EPB41L2O43491 1005 aaKnown RBP15.34■□□□□ 0.05
VMP1-202ENST00000585847 UQCRFS1P1P0C7P4 283 aa15.34■□□□□ 0.05
VMP1-202ENST00000585847 ATP5JP18859 108 aa15.34■□□□□ 0.05
VMP1-202ENST00000585847 ZAP70P43403 619 aa15.34■□□□□ 0.05
VMP1-202ENST00000585847 SCNN1DP51172 638 aa15.34■□□□□ 0.05
VMP1-202ENST00000585847 FKBP1AP62942 108 aaKnown RBP15.34■□□□□ 0.05
VMP1-202ENST00000585847 CHAF1AQ13111 956 aaPredicted RBP15.34■□□□□ 0.05
VMP1-202ENST00000585847 GORABQ5T7V8 394 aa15.34■□□□□ 0.05
VMP1-202ENST00000585847 CHADLQ6NUI6 762 aa15.34■□□□□ 0.05
VMP1-202ENST00000585847 RSBN1LQ6PCB5 846 aaPredicted RBP15.34■□□□□ 0.05
VMP1-202ENST00000585847 GPC2Q8N158 579 aa15.34■□□□□ 0.05
VMP1-202ENST00000585847 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.34■□□□□ 0.05
VMP1-202ENST00000585847 TSHZ2Q9NRE2 1034 aa15.34■□□□□ 0.05
VMP1-202ENST00000585847 SNRKQ9NRH2 765 aa15.34■□□□□ 0.05
VMP1-202ENST00000585847 DENND2AQ9ULE3 1009 aa15.34■□□□□ 0.05
VMP1-202ENST00000585847 PDS5AQ29RF7 1337 aaKnown RBP15.34■□□□□ 0.05
VMP1-202ENST00000585847 ADAMTSL1Q8N6G6 1762 aa15.34■□□□□ 0.05
VMP1-202ENST00000585847 HIP1O00291 1037 aa15.33■□□□□ 0.04
VMP1-202ENST00000585847 CYP2E1P05181 493 aaPredicted RBP15.33■□□□□ 0.04
VMP1-202ENST00000585847 TNIP1Q15025 636 aa15.33■□□□□ 0.04
VMP1-202ENST00000585847 SPATA5Q8NB90 893 aa15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms