RNA–Protein interactions for RNA: ENST00000585749.5

SDF2-203, Transcript of stromal cell derived factor 2, humanhuman

TSL 3

Gene SDF2, Length 823 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-203ENST00000585749 ZNF646O15015 1829 aaPredicted RBP11.88□□□□□ -0.51
SDF2-203ENST00000585749 RANBP2P49792 3224 aaKnown RBP11.88□□□□□ -0.51
SDF2-203ENST00000585749 CACNA1FO60840 1977 aa11.87□□□□□ -0.51
SDF2-203ENST00000585749 CCER2I3L3R5 266 aa11.87□□□□□ -0.51
SDF2-203ENST00000585749 ALDH1A1P00352 501 aa11.87□□□□□ -0.51
SDF2-203ENST00000585749 PTPN12Q05209 780 aaKnown RBP11.87□□□□□ -0.51
SDF2-203ENST00000585749 NBPF9Q3BBW0 867 aa11.87□□□□□ -0.51
SDF2-203ENST00000585749 IER5LQ5T953 404 aa11.87□□□□□ -0.51
SDF2-203ENST00000585749 ARMC5Q96C12 935 aa11.87□□□□□ -0.51
SDF2-203ENST00000585749 FAM89AQ96GI7 184 aa11.87□□□□□ -0.51
SDF2-203ENST00000585749 G3V3G9 751 aa11.86□□□□□ -0.51
SDF2-203ENST00000585749 UFL1O94874 794 aa11.86□□□□□ -0.51
SDF2-203ENST00000585749 RPS8P62241 208 aaKnown RBP11.86□□□□□ -0.51
SDF2-203ENST00000585749 GOLGA2Q08379 1002 aa11.86□□□□□ -0.51
SDF2-203ENST00000585749 TWISTNBQ3B726 338 aaPredicted RBP11.86□□□□□ -0.51
SDF2-203ENST00000585749 SPRYD7Q5W111 196 aa11.86□□□□□ -0.51
SDF2-203ENST00000585749 PTPN22Q9Y2R2 807 aa11.86□□□□□ -0.51
SDF2-203ENST00000585749 SALL2Q9Y467 1007 aaPredicted RBP11.86□□□□□ -0.51
SDF2-203ENST00000585749 ZNF521Q96K83 1311 aa11.86□□□□□ -0.51
SDF2-203ENST00000585749 NF2P35240 595 aa11.85□□□□□ -0.51
SDF2-203ENST00000585749 ISCA1Q9BUE6 129 aa11.85□□□□□ -0.51
SDF2-203ENST00000585749 MYH16Q9H6N6 1097 aa11.85□□□□□ -0.51
SDF2-203ENST00000585749 PHAXQ9H814 394 aaKnown RBP11.85□□□□□ -0.51
SDF2-203ENST00000585749 GGA1Q9UJY5 639 aa11.85□□□□□ -0.51
SDF2-203ENST00000585749 IGF2BP3O00425 579 aaKnown RBP eCLIP11.84□□□□□ -0.51
SDF2-203ENST00000585749 DLL1O00548 723 aa11.84□□□□□ -0.51
SDF2-203ENST00000585749 WNT10BO00744 389 aa11.84□□□□□ -0.51
SDF2-203ENST00000585749 DDX58O95786 925 aaKnown RBP11.84□□□□□ -0.51
SDF2-203ENST00000585749 CAP1Q01518 475 aa11.84□□□□□ -0.51
SDF2-203ENST00000585749 TRIM28Q13263 835 aaKnown RBP11.84□□□□□ -0.51
SDF2-203ENST00000585749 PRKG1Q13976 671 aa11.84□□□□□ -0.51
SDF2-203ENST00000585749 LDLRAD1Q5T700 205 aa11.84□□□□□ -0.51
SDF2-203ENST00000585749 ARMC9Q7Z3E5 817 aa11.84□□□□□ -0.51
SDF2-203ENST00000585749 OTUD5Q96G74 571 aa11.84□□□□□ -0.51
SDF2-203ENST00000585749 ERO1AQ96HE7 468 aa11.84□□□□□ -0.51
SDF2-203ENST00000585749 STK31Q9BXU1 1019 aa11.84□□□□□ -0.51
SDF2-203ENST00000585749 ANKIB1Q9P2G1 1089 aa11.84□□□□□ -0.51
SDF2-203ENST00000585749 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.83□□□□□ -0.52
SDF2-203ENST00000585749 USP17L3A6NCW0 530 aa11.83□□□□□ -0.52
SDF2-203ENST00000585749 USP17L4A6NCW7 530 aa11.83□□□□□ -0.52
SDF2-203ENST00000585749 MANSC4A6NHS7 340 aaPredicted RBP11.83□□□□□ -0.52
SDF2-203ENST00000585749 SEC24BO95487 1268 aa11.83□□□□□ -0.52
SDF2-203ENST00000585749 INHBEP58166 350 aa11.83□□□□□ -0.52
SDF2-203ENST00000585749 USP17L1Q7RTZ2 530 aa11.83□□□□□ -0.52
SDF2-203ENST00000585749 RIC3Q7Z5B4 369 aa11.83□□□□□ -0.52
SDF2-203ENST00000585749 PODNQ7Z5L7 613 aa11.83□□□□□ -0.52
SDF2-203ENST00000585749 CD99L2Q8TCZ2 262 aa11.83□□□□□ -0.52
SDF2-203ENST00000585749 ZFP91Q96JP5 570 aaPredicted RBP11.83□□□□□ -0.52
SDF2-203ENST00000585749 SEC31BQ9NQW1 1179 aa11.83□□□□□ -0.52
SDF2-203ENST00000585749 COL6A3P12111 3177 aa11.83□□□□□ -0.52
SDF2-203ENST00000585749 ATP5J2-PTCD1G3V325 749 aa11.82□□□□□ -0.52
SDF2-203ENST00000585749 H0YGN5 161 aa11.82□□□□□ -0.52
SDF2-203ENST00000585749 IRS4O14654 1257 aaPredicted RBP11.82□□□□□ -0.52
SDF2-203ENST00000585749 EXOSC9Q06265 439 aaKnown RBP11.82□□□□□ -0.52
SDF2-203ENST00000585749 RTL5Q5HYW3 569 aaPredicted RBP11.82□□□□□ -0.52
SDF2-203ENST00000585749 ZNF333Q96JL9 665 aa11.82□□□□□ -0.52
SDF2-203ENST00000585749 ANGEL1Q9UNK9 670 aaKnown RBP11.82□□□□□ -0.52
SDF2-203ENST00000585749 FZD1Q9UP38 647 aa11.82□□□□□ -0.52
SDF2-203ENST00000585749 VAMP4O75379 141 aa11.81□□□□□ -0.52
SDF2-203ENST00000585749 SASH1O94885 1247 aa11.81□□□□□ -0.52
SDF2-203ENST00000585749 ZBTB48P10074 688 aaPredicted RBP11.81□□□□□ -0.52
SDF2-203ENST00000585749 IRX5P78411 483 aaPredicted RBP11.81□□□□□ -0.52
SDF2-203ENST00000585749 CRHR2Q13324 411 aa11.81□□□□□ -0.52
SDF2-203ENST00000585749 DIEXFQ68CQ4 756 aaKnown RBP11.81□□□□□ -0.52
SDF2-203ENST00000585749 METTL22Q9BUU2 404 aaPredicted RBP11.81□□□□□ -0.52
SDF2-203ENST00000585749 MXD3Q9BW11 206 aa11.81□□□□□ -0.52
SDF2-203ENST00000585749 EFCC1Q9HA90 598 aa11.81□□□□□ -0.52
SDF2-203ENST00000585749 XDHP47989 1333 aa11.81□□□□□ -0.52
SDF2-203ENST00000585749 SSC5DA1L4H1 1573 aa11.8□□□□□ -0.52
SDF2-203ENST00000585749 A0A0C4DFX4 3053 aa11.8□□□□□ -0.52
SDF2-203ENST00000585749 MAP3K11Q16584 847 aa11.8□□□□□ -0.52
SDF2-203ENST00000585749 DACT2Q5SW24 774 aa11.8□□□□□ -0.52
SDF2-203ENST00000585749 KSR2Q6VAB6 950 aa11.8□□□□□ -0.52
SDF2-203ENST00000585749 APOBEC3FQ8IUX4 373 aaKnown RBP11.8□□□□□ -0.52
SDF2-203ENST00000585749 OGFOD1Q8N543 542 aa11.8□□□□□ -0.52
SDF2-203ENST00000585749 CCDC191Q8NCU4 936 aa11.8□□□□□ -0.52
SDF2-203ENST00000585749 WNK4Q96J92 1243 aa11.8□□□□□ -0.52
SDF2-203ENST00000585749 MYD88Q99836 296 aa11.8□□□□□ -0.52
SDF2-203ENST00000585749 MAP3K2Q9Y2U5 619 aa11.8□□□□□ -0.52
SDF2-203ENST00000585749 COL1A1P02452 1464 aaPredicted RBP11.8□□□□□ -0.52
SDF2-203ENST00000585749 LAMA3Q16787 3333 aa11.8□□□□□ -0.52
SDF2-203ENST00000585749 CUL9Q8IWT3 2517 aa11.8□□□□□ -0.52
SDF2-203ENST00000585749 PI4KAP2A4QPH2 592 aa11.79□□□□□ -0.52
SDF2-203ENST00000585749 WTIPA6NIX2 430 aaPredicted RBP11.79□□□□□ -0.52
SDF2-203ENST00000585749 SP3Q02447 781 aa11.79□□□□□ -0.52
SDF2-203ENST00000585749 FLIIQ13045 1269 aa11.79□□□□□ -0.52
SDF2-203ENST00000585749 PI4KAP1Q8N8J0 262 aa11.79□□□□□ -0.52
SDF2-203ENST00000585749 ZBTB38Q8NAP3 1195 aaPredicted RBP11.79□□□□□ -0.52
SDF2-203ENST00000585749 SLC17A8Q8NDX2 589 aa11.79□□□□□ -0.52
SDF2-203ENST00000585749 SLC10A4Q96EP9 437 aa11.79□□□□□ -0.52
SDF2-203ENST00000585749 CLMNQ96JQ2 1002 aa11.79□□□□□ -0.52
SDF2-203ENST00000585749 RBM27Q9P2N5 1060 aaKnown RBP11.79□□□□□ -0.52
SDF2-203ENST00000585749 MYO3BQ8WXR4 1341 aa11.79□□□□□ -0.52
SDF2-203ENST00000585749 MED23Q9ULK4 1368 aa11.79□□□□□ -0.52
SDF2-203ENST00000585749 E9PSI1 815 aa11.78□□□□□ -0.52
SDF2-203ENST00000585749 PCCAP05165 728 aaPredicted RBP11.78□□□□□ -0.52
SDF2-203ENST00000585749 HSP90B1P14625 803 aaKnown RBP11.78□□□□□ -0.52
SDF2-203ENST00000585749 ATP2B4P23634 1241 aa11.78□□□□□ -0.52
SDF2-203ENST00000585749 G2E3Q7L622 706 aa11.78□□□□□ -0.52
SDF2-203ENST00000585749 ZBED3Q96IU2 234 aaPredicted RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms