RNA–Protein interactions for RNA: ENST00000584997.1

CASC3-210, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 543 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-210ENST00000584997 CASP7P55210 303 aa13.25□□□□□ -0.29
CASC3-210ENST00000584997 INHBEP58166 350 aa13.25□□□□□ -0.29
CASC3-210ENST00000584997 IFIT5Q13325 482 aaKnown RBP13.25□□□□□ -0.29
CASC3-210ENST00000584997 CCDC27Q2M243 656 aa13.25□□□□□ -0.29
CASC3-210ENST00000584997 ZNF804AQ7Z570 1209 aa13.25□□□□□ -0.29
CASC3-210ENST00000584997 WWC1Q8IX03 1113 aa13.25□□□□□ -0.29
CASC3-210ENST00000584997 PPP2R3BQ9Y5P8 575 aa13.25□□□□□ -0.29
CASC3-210ENST00000584997 LAMB1P07942 1786 aa13.25□□□□□ -0.29
CASC3-210ENST00000584997 CLRN2A0PK11 232 aa13.24□□□□□ -0.29
CASC3-210ENST00000584997 SNAP23O00161 211 aa13.24□□□□□ -0.29
CASC3-210ENST00000584997 ZBTB48P10074 688 aaPredicted RBP13.24□□□□□ -0.29
CASC3-210ENST00000584997 MAP3K11Q16584 847 aa13.24□□□□□ -0.29
CASC3-210ENST00000584997 SUPT20HL1Q3ZLR7 823 aa13.24□□□□□ -0.29
CASC3-210ENST00000584997 CFAP100Q494V2 611 aa13.24□□□□□ -0.29
CASC3-210ENST00000584997 IFNL1Q8IU54 200 aa13.24□□□□□ -0.29
CASC3-210ENST00000584997 CERS5Q8N5B7 392 aa13.24□□□□□ -0.29
CASC3-210ENST00000584997 MTMR14Q8NCE2 650 aa13.24□□□□□ -0.29
CASC3-210ENST00000584997 HELBQ8NG08 1087 aaPredicted RBP13.24□□□□□ -0.29
CASC3-210ENST00000584997 WNK4Q96J92 1243 aa13.24□□□□□ -0.29
CASC3-210ENST00000584997 VEZTQ9HBM0 779 aa13.24□□□□□ -0.29
CASC3-210ENST00000584997 TRIM17Q9Y577 477 aa13.24□□□□□ -0.29
CASC3-210ENST00000584997 IL16Q14005 1332 aa13.23□□□□□ -0.29
CASC3-210ENST00000584997 SPDYE2BA6NHP3 402 aa13.23□□□□□ -0.29
CASC3-210ENST00000584997 SPDYE6P0CI01 402 aa13.23□□□□□ -0.29
CASC3-210ENST00000584997 IREB2P48200 963 aaKnown RBP13.23□□□□□ -0.29
CASC3-210ENST00000584997 RBM5P52756 815 aaKnown RBP eCLIP13.23□□□□□ -0.29
CASC3-210ENST00000584997 TAF7LQ5H9L4 462 aa13.23□□□□□ -0.29
CASC3-210ENST00000584997 C15orf52Q6ZUT6 534 aaKnown RBP13.23□□□□□ -0.29
CASC3-210ENST00000584997 CLMNQ96JQ2 1002 aa13.23□□□□□ -0.29
CASC3-210ENST00000584997 PCDHAC2Q9Y5I4 1007 aa13.23□□□□□ -0.29
CASC3-210ENST00000584997 SSC5DA1L4H1 1573 aa13.23□□□□□ -0.29
CASC3-210ENST00000584997 KIAA0100Q14667 2235 aaKnown RBP13.23□□□□□ -0.29
CASC3-210ENST00000584997 IRS2Q9Y4H2 1338 aa13.22□□□□□ -0.29
CASC3-210ENST00000584997 UNCXA6NJT0 531 aa13.22□□□□□ -0.29
CASC3-210ENST00000584997 IGF2BP3O00425 579 aaKnown RBP eCLIP13.22□□□□□ -0.29
CASC3-210ENST00000584997 IL1R1P14778 569 aa13.22□□□□□ -0.29
CASC3-210ENST00000584997 FKBP1AP62942 108 aaKnown RBP13.22□□□□□ -0.29
CASC3-210ENST00000584997 OTUD7BQ6GQQ9 843 aa13.22□□□□□ -0.29
CASC3-210ENST00000584997 JAG2Q9Y219 1238 aa13.22□□□□□ -0.29
CASC3-210ENST00000584997 FANCIQ9NVI1 1328 aa13.21□□□□□ -0.29
CASC3-210ENST00000584997 HTTP42858 3142 aa13.21□□□□□ -0.29
CASC3-210ENST00000584997 PLIN1O60240 522 aa13.21□□□□□ -0.29
CASC3-210ENST00000584997 CCDC57Q2TAC2 916 aa13.21□□□□□ -0.29
CASC3-210ENST00000584997 NBPF12Q5TAG4 269 aaPredicted RBP13.21□□□□□ -0.29
CASC3-210ENST00000584997 OTOP1Q7RTM1 612 aa13.21□□□□□ -0.29
CASC3-210ENST00000584997 ERO1AQ96HE7 468 aa13.21□□□□□ -0.29
CASC3-210ENST00000584997 PRMT6Q96LA8 375 aaPredicted RBP13.21□□□□□ -0.29
CASC3-210ENST00000584997 OTOFQ9HC10 1997 aa13.2□□□□□ -0.3
CASC3-210ENST00000584997 FOXO4P98177 505 aa13.2□□□□□ -0.3
CASC3-210ENST00000584997 TNFAIP1Q13829 316 aa13.2□□□□□ -0.3
CASC3-210ENST00000584997 RASA3Q14644 834 aa13.2□□□□□ -0.3
CASC3-210ENST00000584997 INTS3Q68E01 1043 aaKnown RBP13.2□□□□□ -0.3
CASC3-210ENST00000584997 LMBR1LQ6UX01 489 aa13.2□□□□□ -0.3
CASC3-210ENST00000584997 LDHAL6AQ6ZMR3 332 aa13.2□□□□□ -0.3
CASC3-210ENST00000584997 ANKRD13AQ8IZ07 590 aa13.2□□□□□ -0.3
CASC3-210ENST00000584997 GCC1Q96CN9 775 aa13.2□□□□□ -0.3
CASC3-210ENST00000584997 CNNM1Q9NRU3 951 aa13.2□□□□□ -0.3
CASC3-210ENST00000584997 F6X3S4 739 aa13.19□□□□□ -0.3
CASC3-210ENST00000584997 CRHR2Q13324 411 aa13.19□□□□□ -0.3
CASC3-210ENST00000584997 CCDC184Q52MB2 194 aa13.19□□□□□ -0.3
CASC3-210ENST00000584997 CD99L2Q8TCZ2 262 aa13.19□□□□□ -0.3
CASC3-210ENST00000584997 RBBP6Q7Z6E9 1792 aaKnown RBP13.19□□□□□ -0.3
CASC3-210ENST00000584997 ARAP2Q8WZ64 1704 aa13.19□□□□□ -0.3
CASC3-210ENST00000584997 AOX1Q06278 1338 aa13.18□□□□□ -0.3
CASC3-210ENST00000584997 VAMP4O75379 141 aa13.18□□□□□ -0.3
CASC3-210ENST00000584997 USP2O75604 605 aaPredicted RBP13.18□□□□□ -0.3
CASC3-210ENST00000584997 MFSD14BQ5SR56 506 aa13.18□□□□□ -0.3
CASC3-210ENST00000584997 BEND3Q5T5X7 828 aa13.18□□□□□ -0.3
CASC3-210ENST00000584997 DIEXFQ68CQ4 756 aaKnown RBP13.18□□□□□ -0.3
CASC3-210ENST00000584997 ZNF594Q96JF6 807 aaPredicted RBP13.18□□□□□ -0.3
CASC3-210ENST00000584997 ELP3Q9H9T3 547 aa13.18□□□□□ -0.3
CASC3-210ENST00000584997 TTF2Q9UNY4 1162 aaKnown RBP13.18□□□□□ -0.3
CASC3-210ENST00000584997 CENPFP49454 3210 aa13.17□□□□□ -0.3
CASC3-210ENST00000584997 POTEFA5A3E0 1075 aa13.17□□□□□ -0.3
CASC3-210ENST00000584997 GRM8O00222 908 aa13.17□□□□□ -0.3
CASC3-210ENST00000584997 GJA5P36382 358 aa13.17□□□□□ -0.3
CASC3-210ENST00000584997 SP3Q02447 781 aa13.17□□□□□ -0.3
CASC3-210ENST00000584997 EXOSC9Q06265 439 aaKnown RBP13.17□□□□□ -0.3
CASC3-210ENST00000584997 NCBP3Q53F19 620 aaKnown RBP13.17□□□□□ -0.3
CASC3-210ENST00000584997 EPHA10Q5JZY3 1008 aa13.17□□□□□ -0.3
CASC3-210ENST00000584997 OPTNQ96CV9 577 aa13.17□□□□□ -0.3
CASC3-210ENST00000584997 EFCC1Q9HA90 598 aa13.17□□□□□ -0.3
CASC3-210ENST00000584997 C9orf78Q9NZ63 289 aaPredicted RBP13.17□□□□□ -0.3
CASC3-210ENST00000584997 ZNF70Q9UC06 446 aaPredicted RBP13.17□□□□□ -0.3
CASC3-210ENST00000584997 PTPN22Q9Y2R2 807 aa13.17□□□□□ -0.3
CASC3-210ENST00000584997 SALL2Q9Y467 1007 aaPredicted RBP13.17□□□□□ -0.3
CASC3-210ENST00000584997 FAM205AQ6ZU69 1335 aa13.16□□□□□ -0.3
CASC3-210ENST00000584997 UBE4AQ14139 1066 aa13.16□□□□□ -0.3
CASC3-210ENST00000584997 SPDYE2Q495Y8 402 aa13.16□□□□□ -0.3
CASC3-210ENST00000584997 WDR63Q8IWG1 891 aa13.16□□□□□ -0.3
CASC3-210ENST00000584997 PTPN18Q99952 460 aa13.16□□□□□ -0.3
CASC3-210ENST00000584997 TDRD3Q9H7E2 651 aaKnown RBP13.16□□□□□ -0.3
CASC3-210ENST00000584997 SERPINA10Q9UK55 444 aa13.16□□□□□ -0.3
CASC3-210ENST00000584997 MKI67P46013 3256 aaKnown RBP13.16□□□□□ -0.3
CASC3-210ENST00000584997 TESPA1A2RU30 521 aaPredicted RBP13.15□□□□□ -0.3
CASC3-210ENST00000584997 TCP10L2B9ZVM9 353 aa13.15□□□□□ -0.3
CASC3-210ENST00000584997 HIBADHP31937 336 aaKnown RBP13.15□□□□□ -0.3
CASC3-210ENST00000584997 GYG1P46976 350 aa13.15□□□□□ -0.3
CASC3-210ENST00000584997 TNNI2P48788 182 aa13.15□□□□□ -0.3
CASC3-210ENST00000584997 SLC4A10Q6U841 1118 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms