RNA–Protein interactions for RNA: ENST00000584755.1

UBBP4-202, Transcript of ubiquitin B pseudogene 4, humanhuman

TSL 1 (best) BASIC

Gene UBBP4, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP4-202ENST00000584755 MYH13Q9UKX3 1938 aa16.82■□□□□ 0.28
UBBP4-202ENST00000584755 TCRBV5S4A2TA0A5A2 114 aa16.81■□□□□ 0.28
UBBP4-202ENST00000584755 UFL1O94874 794 aa16.81■□□□□ 0.28
UBBP4-202ENST00000584755 BECN1Q14457 450 aa16.81■□□□□ 0.28
UBBP4-202ENST00000584755 SLFNL1Q499Z3 407 aa16.81■□□□□ 0.28
UBBP4-202ENST00000584755 IL27Q8NEV9 243 aa16.81■□□□□ 0.28
UBBP4-202ENST00000584755 TBC1D16Q8TBP0 767 aa16.81■□□□□ 0.28
UBBP4-202ENST00000584755 M0R2C6 588 aa16.8■□□□□ 0.28
UBBP4-202ENST00000584755 IDH1O75874 414 aaKnown RBP16.8■□□□□ 0.28
UBBP4-202ENST00000584755 PDE6AP16499 860 aa16.8■□□□□ 0.28
UBBP4-202ENST00000584755 MAP3K12Q12852 859 aa16.8■□□□□ 0.28
UBBP4-202ENST00000584755 SLC9C2Q5TAH2 1124 aa16.8■□□□□ 0.28
UBBP4-202ENST00000584755 CCDC129Q6ZRS4 1044 aa16.8■□□□□ 0.28
UBBP4-202ENST00000584755 TDRD7Q8NHU6 1098 aaKnown RBP16.8■□□□□ 0.28
UBBP4-202ENST00000584755 DSCC1Q9BVC3 393 aa16.8■□□□□ 0.28
UBBP4-202ENST00000584755 TBC1D2Q9BYX2 928 aa16.8■□□□□ 0.28
UBBP4-202ENST00000584755 POLLQ9UGP5 575 aa16.8■□□□□ 0.28
UBBP4-202ENST00000584755 WWC3Q9ULE0 1092 aa16.8■□□□□ 0.28
UBBP4-202ENST00000584755 RBM8AQ9Y5S9 174 aaKnown RBP16.8■□□□□ 0.28
UBBP4-202ENST00000584755 IGSF3O75054 1194 aa16.8■□□□□ 0.28
UBBP4-202ENST00000584755 ZNF804AQ7Z570 1209 aa16.8■□□□□ 0.28
UBBP4-202ENST00000584755 CNKSR1Q969H4 720 aa16.8■□□□□ 0.28
UBBP4-202ENST00000584755 MTFR1LQ9H019 292 aa16.8■□□□□ 0.28
UBBP4-202ENST00000584755 IQSEC3Q9UPP2 1182 aaPredicted RBP16.8■□□□□ 0.28
UBBP4-202ENST00000584755 SNX14Q9Y5W7 946 aa16.8■□□□□ 0.28
UBBP4-202ENST00000584755 CHRNA5P30532 468 aa16.79■□□□□ 0.28
UBBP4-202ENST00000584755 WASHC4Q2M389 1173 aa16.79■□□□□ 0.28
UBBP4-202ENST00000584755 RASEFQ8IZ41 740 aa16.79■□□□□ 0.28
UBBP4-202ENST00000584755 ZNF622Q969S3 477 aaKnown RBP eCLIP16.79■□□□□ 0.281e-14■□□□□ 11.2
UBBP4-202ENST00000584755 PUS7LQ9H0K6 701 aaKnown RBP16.79■□□□□ 0.28
UBBP4-202ENST00000584755 ZNF532Q9HCE3 1301 aa16.79■□□□□ 0.28
UBBP4-202ENST00000584755 SALL1Q9NSC2 1324 aa16.79■□□□□ 0.28
UBBP4-202ENST00000584755 SNED1Q8TER0 1413 aa16.78■□□□□ 0.28
UBBP4-202ENST00000584755 SLX4Q8IY92 1834 aa16.78■□□□□ 0.28
UBBP4-202ENST00000584755 CACNA1SQ13698 1873 aa16.78■□□□□ 0.28
UBBP4-202ENST00000584755 IL1R1P14778 569 aa16.78■□□□□ 0.28
UBBP4-202ENST00000584755 TSGA10IPQ3SY00 556 aa16.78■□□□□ 0.28
UBBP4-202ENST00000584755 CREB3L3Q68CJ9 461 aa16.78■□□□□ 0.28
UBBP4-202ENST00000584755 PRPF40BQ6NWY9 871 aaKnown RBP16.78■□□□□ 0.28
UBBP4-202ENST00000584755 TMED8Q6PL24 325 aaPredicted RBP16.78■□□□□ 0.28
UBBP4-202ENST00000584755 MPNDQ8N594 471 aa16.78■□□□□ 0.28
UBBP4-202ENST00000584755 C7orf43Q8WVR3 580 aa16.78■□□□□ 0.28
UBBP4-202ENST00000584755 U3KPZ7 1027 aaPredicted RBP16.78■□□□□ 0.28
UBBP4-202ENST00000584755 HSPD1P10809 573 aaKnown RBP16.77■□□□□ 0.28
UBBP4-202ENST00000584755 GPR101Q96P66 508 aaPredicted RBP16.77■□□□□ 0.28
UBBP4-202ENST00000584755 KIAA1551Q9HCM1 1747 aa16.77■□□□□ 0.27
UBBP4-202ENST00000584755 SLC27A2O14975 620 aa16.76■□□□□ 0.27
UBBP4-202ENST00000584755 FOXP2O15409 715 aa16.76■□□□□ 0.27
UBBP4-202ENST00000584755 GPAA1O43292 621 aa16.76■□□□□ 0.27
UBBP4-202ENST00000584755 ZBTB7AO95365 584 aa16.76■□□□□ 0.27
UBBP4-202ENST00000584755 VPS53Q5VIR6 699 aa16.76■□□□□ 0.27
UBBP4-202ENST00000584755 MAGEB6Q8N7X4 407 aa16.76■□□□□ 0.27
UBBP4-202ENST00000584755 TM6SF1Q9BZW5 370 aa16.76■□□□□ 0.27
UBBP4-202ENST00000584755 TMX4Q9H1E5 349 aaPredicted RBP16.76■□□□□ 0.27
UBBP4-202ENST00000584755 CD209Q9NNX6 404 aa16.76■□□□□ 0.27
UBBP4-202ENST00000584755 LRP2BPQ9P2M1 347 aa16.76■□□□□ 0.27
UBBP4-202ENST00000584755 MAST2Q6P0Q8 1798 aa16.76■□□□□ 0.27
UBBP4-202ENST00000584755 FRAT2O75474 233 aaPredicted RBP16.75■□□□□ 0.27
UBBP4-202ENST00000584755 CD2BP2O95400 341 aaKnown RBP16.75■□□□□ 0.27
UBBP4-202ENST00000584755 R3HDM1Q15032 1099 aaKnown RBP16.75■□□□□ 0.27
UBBP4-202ENST00000584755 RNF20Q5VTR2 975 aa16.75■□□□□ 0.27
UBBP4-202ENST00000584755 CC2D2BQ6DHV5 1058 aa16.75■□□□□ 0.27
UBBP4-202ENST00000584755 OLFM4Q6UX06 510 aa16.75■□□□□ 0.27
UBBP4-202ENST00000584755 DPP8Q6V1X1 898 aaPredicted RBP16.75■□□□□ 0.27
UBBP4-202ENST00000584755 WDR66Q8TBY9 1149 aa16.75■□□□□ 0.27
UBBP4-202ENST00000584755 C6orf229H3BNL8 230 aa16.74■□□□□ 0.27
UBBP4-202ENST00000584755 ZKSCAN1P17029 563 aaPredicted RBP16.74■□□□□ 0.27
UBBP4-202ENST00000584755 KCNA3P22001 575 aa16.74■□□□□ 0.27
UBBP4-202ENST00000584755 HSCBQ8IWL3 235 aa16.74■□□□□ 0.27
UBBP4-202ENST00000584755 ZGPATQ8N5A5 531 aaKnown RBP16.74■□□□□ 0.27
UBBP4-202ENST00000584755 SGIP1Q9BQI5 828 aa16.74■□□□□ 0.27
UBBP4-202ENST00000584755 RTFDC1Q9BY42 306 aaPredicted RBP16.74■□□□□ 0.27
UBBP4-202ENST00000584755 ABCF2Q9UG63 623 aa16.74■□□□□ 0.27
UBBP4-202ENST00000584755 RPAP1Q9BWH6 1393 aaPredicted RBP16.74■□□□□ 0.27
UBBP4-202ENST00000584755 ST18O60284 1047 aa16.73■□□□□ 0.27
UBBP4-202ENST00000584755 POLD1P28340 1107 aa16.73■□□□□ 0.27
UBBP4-202ENST00000584755 SLC4A3P48751 1232 aa16.73■□□□□ 0.27
UBBP4-202ENST00000584755 ERICH6Q7L0X2 663 aa16.73■□□□□ 0.27
UBBP4-202ENST00000584755 ZNF384Q8TF68 577 aa16.73■□□□□ 0.27
UBBP4-202ENST00000584755 COA1Q9GZY4 146 aa16.73■□□□□ 0.27
UBBP4-202ENST00000584755 DAXXQ9UER7 740 aaPredicted RBP16.73■□□□□ 0.27
UBBP4-202ENST00000584755 FAM205AQ6ZU69 1335 aa16.73■□□□□ 0.27
UBBP4-202ENST00000584755 TGFB2P61812 414 aa16.73■□□□□ 0.27
UBBP4-202ENST00000584755 SPTY2D1Q68D10 685 aaPredicted RBP16.73■□□□□ 0.27
UBBP4-202ENST00000584755 NSUN4Q96CB9 384 aaKnown RBP16.73■□□□□ 0.27
UBBP4-202ENST00000584755 STRBPQ96SI9 672 aaKnown RBP16.73■□□□□ 0.27
UBBP4-202ENST00000584755 RAI14Q9P0K7 980 aa16.73■□□□□ 0.27
UBBP4-202ENST00000584755 ZMYM6O95789 1325 aa16.72■□□□□ 0.27
UBBP4-202ENST00000584755 CYP21A2P08686 494 aa16.72■□□□□ 0.27
UBBP4-202ENST00000584755 DPEP1P16444 411 aa16.72■□□□□ 0.27
UBBP4-202ENST00000584755 NEK4P51957 841 aa16.72■□□□□ 0.27
UBBP4-202ENST00000584755 CHAF1AQ13111 956 aaPredicted RBP16.72■□□□□ 0.27
UBBP4-202ENST00000584755 GRIPAP1Q4V328 841 aa16.72■□□□□ 0.27
UBBP4-202ENST00000584755 TTLL6Q8N841 843 aa16.72■□□□□ 0.27
UBBP4-202ENST00000584755 AIDAQ96BJ3 306 aa16.72■□□□□ 0.27
UBBP4-202ENST00000584755 EYA3Q99504 573 aa16.72■□□□□ 0.27
UBBP4-202ENST00000584755 ZC3H12CQ9C0D7 883 aaKnown RBP16.72■□□□□ 0.27
UBBP4-202ENST00000584755 ZSWIM6Q9HCJ5 1215 aa16.72■□□□□ 0.27
UBBP4-202ENST00000584755 ATF5Q9Y2D1 282 aaPredicted RBP16.72■□□□□ 0.27
UBBP4-202ENST00000584755 CCDC88AQ3V6T2 1871 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms