RNA–Protein interactions for RNA: ENST00000583930.5

CCDC178-213, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 3,094 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-213ENST00000583930 ALDH1L1O75891 902 aa3.9□□□□□ -1.78
CCDC178-213ENST00000583930 BRD1O95696 1058 aa3.9□□□□□ -1.78
CCDC178-213ENST00000583930 PDE3AQ14432 1141 aa3.9□□□□□ -1.78
CCDC178-213ENST00000583930 OXLD1Q5BKU9 147 aa3.9□□□□□ -1.78
CCDC178-213ENST00000583930 C4orf48Q5BLP8 95 aa3.9□□□□□ -1.78
CCDC178-213ENST00000583930 TMC4Q7Z404 712 aa3.9□□□□□ -1.78
CCDC178-213ENST00000583930 PRIMPOLQ96LW4 560 aa3.9□□□□□ -1.78
CCDC178-213ENST00000583930 MBIPQ9NS73 344 aa3.9□□□□□ -1.78
CCDC178-213ENST00000583930 CEP126Q9P2H0 1117 aa3.9□□□□□ -1.78
CCDC178-213ENST00000583930 RFX7Q2KHR2 1363 aa3.9□□□□□ -1.79
CCDC178-213ENST00000583930 IRS2Q9Y4H2 1338 aa3.9□□□□□ -1.79
CCDC178-213ENST00000583930 TAGLNQ01995 201 aaKnown RBP3.9□□□□□ -1.79
CCDC178-213ENST00000583930 RABL6Q3YEC7 729 aaPredicted RBP3.9□□□□□ -1.79
CCDC178-213ENST00000583930 CRY2Q49AN0 593 aa3.9□□□□□ -1.79
CCDC178-213ENST00000583930 NOM1Q5C9Z4 860 aaKnown RBP3.9□□□□□ -1.79
CCDC178-213ENST00000583930 ANKK1Q8NFD2 765 aa3.9□□□□□ -1.79
CCDC178-213ENST00000583930 FOXJ1Q92949 421 aa3.9□□□□□ -1.79
CCDC178-213ENST00000583930 PURBQ96QR8 312 aaKnown RBP3.9□□□□□ -1.79
CCDC178-213ENST00000583930 MRS2Q9HD23 443 aa3.9□□□□□ -1.79
CCDC178-213ENST00000583930 NLRP2Q9NX02 1062 aa3.9□□□□□ -1.79
CCDC178-213ENST00000583930 TMOD3Q9NYL9 352 aa3.9□□□□□ -1.79
CCDC178-213ENST00000583930 NARFQ9UHQ1 456 aa3.9□□□□□ -1.79
CCDC178-213ENST00000583930 PNPLA7Q6ZV29 1317 aa3.89□□□□□ -1.79
CCDC178-213ENST00000583930 ATG7O95352 703 aa3.89□□□□□ -1.79
CCDC178-213ENST00000583930 U2AF1L5P0DN76 240 aaPredicted RBP3.89□□□□□ -1.79
CCDC178-213ENST00000583930 RIPK4P57078 832 aa3.89□□□□□ -1.79
CCDC178-213ENST00000583930 U2AF1Q01081 240 aaKnown RBP eCLIP3.89□□□□□ -1.79
CCDC178-213ENST00000583930 DPYDQ12882 1025 aa3.89□□□□□ -1.79
CCDC178-213ENST00000583930 HSP90AB3PQ58FF7 597 aa3.89□□□□□ -1.79
CCDC178-213ENST00000583930 RNF135Q8IUD6 432 aa3.89□□□□□ -1.79
CCDC178-213ENST00000583930 OGFOD1Q8N543 542 aa3.89□□□□□ -1.79
CCDC178-213ENST00000583930 MAP3K15Q6ZN16 1313 aa3.89□□□□□ -1.79
CCDC178-213ENST00000583930 USP17L15C9J2P7 530 aa3.89□□□□□ -1.79
CCDC178-213ENST00000583930 USP17L10C9JJH3 530 aa3.89□□□□□ -1.79
CCDC178-213ENST00000583930 USP17L13C9JLJ4 530 aa3.89□□□□□ -1.79
CCDC178-213ENST00000583930 USP17L12C9JPN9 530 aa3.89□□□□□ -1.79
CCDC178-213ENST00000583930 USP17L11C9JVI0 530 aa3.89□□□□□ -1.79
CCDC178-213ENST00000583930 USP17L21D6R901 530 aa3.89□□□□□ -1.79
CCDC178-213ENST00000583930 USP17L18D6R9N7 530 aa3.89□□□□□ -1.79
CCDC178-213ENST00000583930 USP17L22D6RA61 530 aa3.89□□□□□ -1.79
CCDC178-213ENST00000583930 USP17L17D6RBQ6 530 aa3.89□□□□□ -1.79
CCDC178-213ENST00000583930 USP17L19D6RCP7 530 aa3.89□□□□□ -1.79
CCDC178-213ENST00000583930 USP17L20D6RJB6 530 aa3.89□□□□□ -1.79
CCDC178-213ENST00000583930 CAMTA2O94983 1202 aa3.89□□□□□ -1.79
CCDC178-213ENST00000583930 FMNL1O95466 1100 aaPredicted RBP3.89□□□□□ -1.79
CCDC178-213ENST00000583930 HOXA10P31260 410 aaPredicted RBP3.89□□□□□ -1.79
CCDC178-213ENST00000583930 USP17L24Q0WX57 530 aa3.89□□□□□ -1.79
CCDC178-213ENST00000583930 AGERQ15109 404 aa3.89□□□□□ -1.79
CCDC178-213ENST00000583930 PARP10Q53GL7 1025 aa3.89□□□□□ -1.79
CCDC178-213ENST00000583930 PLPP7Q8NBV4 271 aa3.89□□□□□ -1.79
CCDC178-213ENST00000583930 CCDC85AQ96PX6 553 aaPredicted RBP3.89□□□□□ -1.79
CCDC178-213ENST00000583930 SLC4A5Q9BY07 1137 aa3.89□□□□□ -1.79
CCDC178-213ENST00000583930 UNC93B1Q9H1C4 597 aa3.89□□□□□ -1.79
CCDC178-213ENST00000583930 CCDC87Q9NVE4 849 aa3.89□□□□□ -1.79
CCDC178-213ENST00000583930 A0A0G2JMZ2 1700 aa3.89□□□□□ -1.79
CCDC178-213ENST00000583930 LOC102724428A0A0B4J2F2 783 aa3.89□□□□□ -1.79
CCDC178-213ENST00000583930 UNCXA6NJT0 531 aa3.89□□□□□ -1.79
CCDC178-213ENST00000583930 CCNYL3P0C7X3 344 aa3.89□□□□□ -1.79
CCDC178-213ENST00000583930 JUNDP17535 347 aa3.89□□□□□ -1.79
CCDC178-213ENST00000583930 SIK1P57059 783 aa3.89□□□□□ -1.79
CCDC178-213ENST00000583930 PTK7Q13308 1070 aa3.89□□□□□ -1.79
CCDC178-213ENST00000583930 ZNF211Q13398 564 aaPredicted RBP3.89□□□□□ -1.79
CCDC178-213ENST00000583930 LINC00116Q8NCU8 138 aa3.89□□□□□ -1.79
CCDC178-213ENST00000583930 PLBD2Q8NHP8 589 aa3.89□□□□□ -1.79
CCDC178-213ENST00000583930 DBF4Q9UBU7 674 aaPredicted RBP3.89□□□□□ -1.79
CCDC178-213ENST00000583930 SFI1A8K8P3 1242 aa3.88□□□□□ -1.79
CCDC178-213ENST00000583930 NEFMP07197 916 aa3.88□□□□□ -1.79
CCDC178-213ENST00000583930 BAG6P46379 1132 aa3.88□□□□□ -1.79
CCDC178-213ENST00000583930 ITPK1Q13572 414 aa3.88□□□□□ -1.79
CCDC178-213ENST00000583930 SLFNL1Q499Z3 407 aa3.88□□□□□ -1.79
CCDC178-213ENST00000583930 DESI1Q6ICB0 168 aa3.88□□□□□ -1.79
CCDC178-213ENST00000583930 BAP1Q92560 729 aa3.88□□□□□ -1.79
CCDC178-213ENST00000583930 CHMP4BQ9H444 224 aaKnown RBP3.88□□□□□ -1.79
CCDC178-213ENST00000583930 LGR6Q9HBX8 967 aa3.88□□□□□ -1.79
CCDC178-213ENST00000583930 EVA1BQ9NVM1 165 aa3.88□□□□□ -1.79
CCDC178-213ENST00000583930 SLX4Q8IY92 1834 aa3.88□□□□□ -1.79
CCDC178-213ENST00000583930 HSP90B1P14625 803 aaKnown RBP3.88□□□□□ -1.79
CCDC178-213ENST00000583930 CABP4P57796 275 aa3.88□□□□□ -1.79
CCDC178-213ENST00000583930 PTPRNQ16849 979 aa3.88□□□□□ -1.79
CCDC178-213ENST00000583930 Q3C1V9 767 aa3.88□□□□□ -1.79
CCDC178-213ENST00000583930 CCDC30Q5VVM6 783 aa3.88□□□□□ -1.79
CCDC178-213ENST00000583930 LAPTM4BQ86VI4 370 aa3.88□□□□□ -1.79
CCDC178-213ENST00000583930 TRPM7Q96QT4 1865 aa3.88□□□□□ -1.79
CCDC178-213ENST00000583930 RTFDC1Q9BY42 306 aaPredicted RBP3.88□□□□□ -1.79
CCDC178-213ENST00000583930 TSR3Q9UJK0 312 aaKnown RBP3.88□□□□□ -1.79
CCDC178-213ENST00000583930 SIPA1L1O43166 1804 aa3.88□□□□□ -1.79
CCDC178-213ENST00000583930 BTBD11A6QL63 1104 aa3.87□□□□□ -1.79
CCDC178-213ENST00000583930 APAF1O14727 1248 aa3.87□□□□□ -1.79
CCDC178-213ENST00000583930 ADAMTS2O95450 1211 aa3.87□□□□□ -1.79
CCDC178-213ENST00000583930 STARD3NLO95772 234 aa3.87□□□□□ -1.79
CCDC178-213ENST00000583930 S1PR4O95977 384 aa3.87□□□□□ -1.79
CCDC178-213ENST00000583930 ABL1P00519 1130 aa3.87□□□□□ -1.79
CCDC178-213ENST00000583930 CSF1RP07333 972 aa3.87□□□□□ -1.79
CCDC178-213ENST00000583930 SCTRP47872 440 aa3.87□□□□□ -1.79
CCDC178-213ENST00000583930 RARSP54136 660 aaKnown RBP3.87□□□□□ -1.79
CCDC178-213ENST00000583930 FKBP1AP62942 108 aaKnown RBP3.87□□□□□ -1.79
CCDC178-213ENST00000583930 SLC15A2Q16348 729 aa3.87□□□□□ -1.79
CCDC178-213ENST00000583930 TXNRD1Q16881 649 aa3.87□□□□□ -1.79
CCDC178-213ENST00000583930 RTF1Q92541 710 aaKnown RBP3.87□□□□□ -1.79
CCDC178-213ENST00000583930 ZNF512BQ96KM6 892 aaPredicted RBP3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms