RNA–Protein interactions for RNA: ENST00000583877.5

NUP85-223, Transcript of nucleoporin 85, human

TSL 3

Gene NUP85, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP85-223	ENST00000583877	LEMD3	Q9Y2U8	911 aa		11.24	□□□□□ -0.61
NUP85-223	ENST00000583877	ARAP2	Q8WZ64	1704 aa		11.23	□□□□□ -0.61
NUP85-223	ENST00000583877	IGKV5-2	P06315	115 aa		11.23	□□□□□ -0.61
NUP85-223	ENST00000583877	INHBE	P58166	350 aa		11.23	□□□□□ -0.61
NUP85-223	ENST00000583877	TTLL5	Q6EMB2	1281 aa		11.23	□□□□□ -0.61
NUP85-223	ENST00000583877	KSR2	Q6VAB6	950 aa		11.23	□□□□□ -0.61
NUP85-223	ENST00000583877	TXNRD3	Q86VQ6	643 aa		11.23	□□□□□ -0.61
NUP85-223	ENST00000583877	C8orf58	Q8NAV2	365 aa		11.23	□□□□□ -0.61
NUP85-223	ENST00000583877	ZBED3	Q96IU2	234 aa	Predicted RBP	11.23	□□□□□ -0.61
NUP85-223	ENST00000583877	R3HDML	Q9H3Y0	253 aa		11.23	□□□□□ -0.61
NUP85-223	ENST00000583877	ANGEL1	Q9UNK9	670 aa	Known RBP	11.23	□□□□□ -0.61
NUP85-223	ENST00000583877	SZT2	Q5T011	3432 aa		11.23	□□□□□ -0.61
NUP85-223	ENST00000583877	ZNF804B	A4D1E1	1349 aa		11.22	□□□□□ -0.61
NUP85-223	ENST00000583877	PI4KAP2	A4QPH2	592 aa		11.22	□□□□□ -0.61
NUP85-223	ENST00000583877	MANSC4	A6NHS7	340 aa	Predicted RBP	11.22	□□□□□ -0.61
NUP85-223	ENST00000583877	ZBTB48	P10074	688 aa	Predicted RBP	11.22	□□□□□ -0.61
NUP85-223	ENST00000583877	IGHMBP2	P38935	993 aa	Known RBP	11.22	□□□□□ -0.61
NUP85-223	ENST00000583877	NEXN	Q0ZGT2	675 aa		11.22	□□□□□ -0.61
NUP85-223	ENST00000583877	PRKG1	Q13976	671 aa		11.22	□□□□□ -0.61
NUP85-223	ENST00000583877	MAP3K11	Q16584	847 aa		11.22	□□□□□ -0.61
NUP85-223	ENST00000583877	INTS3	Q68E01	1043 aa	Known RBP	11.22	□□□□□ -0.61
NUP85-223	ENST00000583877	IFNL1	Q8IU54	200 aa		11.22	□□□□□ -0.61
NUP85-223	ENST00000583877	KIAA0825	Q8IV33	1275 aa		11.22	□□□□□ -0.61
NUP85-223	ENST00000583877	PI4KAP1	Q8N8J0	262 aa		11.22	□□□□□ -0.61
NUP85-223	ENST00000583877	RNF25	Q96BH1	459 aa	Predicted RBP	11.22	□□□□□ -0.61
NUP85-223	ENST00000583877	ANKRD2	Q9GZV1	360 aa		11.22	□□□□□ -0.61
NUP85-223	ENST00000583877	UNCX	A6NJT0	531 aa		11.21	□□□□□ -0.61
NUP85-223	ENST00000583877	GTF2I	P78347	998 aa		11.21	□□□□□ -0.61
NUP85-223	ENST00000583877	OTOP1	Q7RTM1	612 aa		11.21	□□□□□ -0.61
NUP85-223	ENST00000583877	MTMR14	Q8NCE2	650 aa		11.21	□□□□□ -0.61
NUP85-223	ENST00000583877	FAM212A	Q96EL1	285 aa		11.21	□□□□□ -0.61
NUP85-223	ENST00000583877	SLC10A4	Q96EP9	437 aa		11.21	□□□□□ -0.61
NUP85-223	ENST00000583877	DEFB129	Q9H1M3	183 aa		11.21	□□□□□ -0.61
NUP85-223	ENST00000583877	SSC5D	A1L4H1	1573 aa		11.2	□□□□□ -0.62
NUP85-223	ENST00000583877	NEURL1B	A8MQ27	555 aa		11.2	□□□□□ -0.62
NUP85-223	ENST00000583877		H7C1W4	665 aa		11.2	□□□□□ -0.62
NUP85-223	ENST00000583877	APAF1	O14727	1248 aa		11.2	□□□□□ -0.62
NUP85-223	ENST00000583877	DLGAP5	Q15398	846 aa		11.2	□□□□□ -0.62
NUP85-223	ENST00000583877	CWF19L2	Q2TBE0	894 aa	Known RBP	11.2	□□□□□ -0.62
NUP85-223	ENST00000583877	HS6ST3	Q8IZP7	471 aa		11.2	□□□□□ -0.62
NUP85-223	ENST00000583877	PLA2G12B	Q9BX93	195 aa		11.2	□□□□□ -0.62
NUP85-223	ENST00000583877	TRIM17	Q9Y577	477 aa		11.2	□□□□□ -0.62
NUP85-223	ENST00000583877	PPP2R3B	Q9Y5P8	575 aa		11.2	□□□□□ -0.62
NUP85-223	ENST00000583877	TRIOBP	Q9H2D6	2365 aa		11.2	□□□□□ -0.62
NUP85-223	ENST00000583877	MYH13	Q9UKX3	1938 aa		11.19	□□□□□ -0.62
NUP85-223	ENST00000583877	PPP1R12B	O60237	982 aa	Predicted RBP	11.19	□□□□□ -0.62
NUP85-223	ENST00000583877	ITGA6	P23229	1130 aa		11.19	□□□□□ -0.62
NUP85-223	ENST00000583877	KLRK1	P26718	216 aa		11.19	□□□□□ -0.62
NUP85-223	ENST00000583877	DDX10	Q13206	875 aa	Known RBP	11.19	□□□□□ -0.62
NUP85-223	ENST00000583877	UBE3B	Q7Z3V4	1068 aa		11.19	□□□□□ -0.62
NUP85-223	ENST00000583877	TSPYL6	Q8N831	410 aa		11.19	□□□□□ -0.62
NUP85-223	ENST00000583877	ERO1A	Q96HE7	468 aa		11.19	□□□□□ -0.62
NUP85-223	ENST00000583877	WNK4	Q96J92	1243 aa		11.19	□□□□□ -0.62
NUP85-223	ENST00000583877	MPHOSPH8	Q99549	860 aa		11.19	□□□□□ -0.62
NUP85-223	ENST00000583877	STK31	Q9BXU1	1019 aa		11.19	□□□□□ -0.62
NUP85-223	ENST00000583877	CD209	Q9NNX6	404 aa		11.19	□□□□□ -0.62
NUP85-223	ENST00000583877	FZD1	Q9UP38	647 aa		11.19	□□□□□ -0.62
NUP85-223	ENST00000583877	AK9	Q5TCS8	1911 aa		11.19	□□□□□ -0.62
NUP85-223	ENST00000583877	RANBP2	P49792	3224 aa	Known RBP	11.18	□□□□□ -0.62
NUP85-223	ENST00000583877	IRS2	Q9Y4H2	1338 aa		11.18	□□□□□ -0.62
NUP85-223	ENST00000583877	POTEF	A5A3E0	1075 aa		11.18	□□□□□ -0.62
NUP85-223	ENST00000583877	IGF2BP3	O00425	579 aa	Known RBP eCLIP	11.18	□□□□□ -0.62
NUP85-223	ENST00000583877	MYO1B	O43795	1136 aa		11.18	□□□□□ -0.62
NUP85-223	ENST00000583877	CSF1R	P07333	972 aa		11.18	□□□□□ -0.62
NUP85-223	ENST00000583877	KCNJ4	P48050	445 aa		11.18	□□□□□ -0.62
NUP85-223	ENST00000583877	SUPT20HL1	Q3ZLR7	823 aa		11.18	□□□□□ -0.62
NUP85-223	ENST00000583877	HABP4	Q5JVS0	413 aa	Known RBP	11.18	□□□□□ -0.62
NUP85-223	ENST00000583877	OTUD7B	Q6GQQ9	843 aa		11.18	□□□□□ -0.62
NUP85-223	ENST00000583877	CLMN	Q96JQ2	1002 aa		11.18	□□□□□ -0.62
NUP85-223	ENST00000583877	PTPN22	Q9Y2R2	807 aa		11.18	□□□□□ -0.62
NUP85-223	ENST00000583877	PITPNM1	O00562	1244 aa		11.17	□□□□□ -0.62
NUP85-223	ENST00000583877	RIOK3	O14730	519 aa	Known RBP	11.17	□□□□□ -0.62
NUP85-223	ENST00000583877	IREB2	P48200	963 aa	Known RBP	11.17	□□□□□ -0.62
NUP85-223	ENST00000583877	CASP7	P55210	303 aa		11.17	□□□□□ -0.62
NUP85-223	ENST00000583877	CHRND	Q07001	517 aa		11.17	□□□□□ -0.62
NUP85-223	ENST00000583877	GCKR	Q14397	625 aa		11.17	□□□□□ -0.62
NUP85-223	ENST00000583877	C15orf52	Q6ZUT6	534 aa	Known RBP	11.17	□□□□□ -0.62
NUP85-223	ENST00000583877	CERS5	Q8N5B7	392 aa		11.17	□□□□□ -0.62
NUP85-223	ENST00000583877	TSHZ2	Q9NRE2	1034 aa		11.17	□□□□□ -0.62
NUP85-223	ENST00000583877	TAOK2	Q9UL54	1235 aa		11.17	□□□□□ -0.62
NUP85-223	ENST00000583877	ZSWIM8	A7E2V4	1837 aa		11.16	□□□□□ -0.62
NUP85-223	ENST00000583877	IL1R1	P14778	569 aa		11.16	□□□□□ -0.62
NUP85-223	ENST00000583877	FKBP1A	P62942	108 aa	Known RBP	11.16	□□□□□ -0.62
NUP85-223	ENST00000583877	CRHR2	Q13324	411 aa		11.16	□□□□□ -0.62
NUP85-223	ENST00000583877	CFAP100	Q494V2	611 aa		11.16	□□□□□ -0.62
NUP85-223	ENST00000583877	G2E3	Q7L622	706 aa		11.16	□□□□□ -0.62
NUP85-223	ENST00000583877	CD99L2	Q8TCZ2	262 aa		11.16	□□□□□ -0.62
NUP85-223	ENST00000583877	ARMC5	Q96C12	935 aa		11.16	□□□□□ -0.62
NUP85-223	ENST00000583877	MYH16	Q9H6N6	1097 aa		11.16	□□□□□ -0.62
NUP85-223	ENST00000583877	EFCC1	Q9HA90	598 aa		11.16	□□□□□ -0.62
NUP85-223	ENST00000583877	MGAM	O43451	1857 aa		11.16	□□□□□ -0.62
NUP85-223	ENST00000583877	ANKRD18B	A2A2Z9	1011 aa		11.15	□□□□□ -0.62
NUP85-223	ENST00000583877	TESPA1	A2RU30	521 aa	Predicted RBP	11.15	□□□□□ -0.62
NUP85-223	ENST00000583877	USP2	O75604	605 aa	Predicted RBP	11.15	□□□□□ -0.62
NUP85-223	ENST00000583877	GJA5	P36382	358 aa		11.15	□□□□□ -0.62
NUP85-223	ENST00000583877	SP3	Q02447	781 aa		11.15	□□□□□ -0.62
NUP85-223	ENST00000583877	NBPF12	Q5TAG4	269 aa	Predicted RBP	11.15	□□□□□ -0.62
NUP85-223	ENST00000583877	ZNF804A	Q7Z570	1209 aa		11.15	□□□□□ -0.62
NUP85-223	ENST00000583877	ANKRD13A	Q8IZ07	590 aa		11.15	□□□□□ -0.62
NUP85-223	ENST00000583877	RASEF	Q8IZ41	740 aa		11.15	□□□□□ -0.62

Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms