RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 IRX2Q9BZI1 471 aaPredicted RBP10.13□□□□□ -0.79
SMCHD1-210ENST00000583800 KCNQ5Q9NR82 932 aa10.13□□□□□ -0.79
SMCHD1-210ENST00000583800 DBF4Q9UBU7 674 aaPredicted RBP10.13□□□□□ -0.79
SMCHD1-210ENST00000583800 ADM5C9JUS6 153 aa10.12□□□□□ -0.79
SMCHD1-210ENST00000583800 IRS4O14654 1257 aaPredicted RBP10.12□□□□□ -0.79
SMCHD1-210ENST00000583800 CA12O43570 354 aa10.12□□□□□ -0.79
SMCHD1-210ENST00000583800 HUNKP57058 714 aa10.12□□□□□ -0.79
SMCHD1-210ENST00000583800 WDR43Q15061 677 aaKnown RBP eCLIP10.12□□□□□ -0.79
SMCHD1-210ENST00000583800 RBM26Q5T8P6 1007 aaKnown RBP10.12□□□□□ -0.79
SMCHD1-210ENST00000583800 DUSP27Q5VZP5 1158 aa10.12□□□□□ -0.79
SMCHD1-210ENST00000583800 DPF2Q92785 391 aa10.12□□□□□ -0.79
SMCHD1-210ENST00000583800 MCOLN1Q9GZU1 580 aa10.12□□□□□ -0.79
SMCHD1-210ENST00000583800 ARIH1Q9Y4X5 557 aaPredicted RBP10.12□□□□□ -0.79
SMCHD1-210ENST00000583800 ZNF646O15015 1829 aaPredicted RBP10.12□□□□□ -0.79
SMCHD1-210ENST00000583800 NOGQ13253 232 aa10.11□□□□□ -0.79
SMCHD1-210ENST00000583800 KRT26Q7Z3Y9 468 aa10.11□□□□□ -0.79
SMCHD1-210ENST00000583800 TBC1D16Q8TBP0 767 aa10.11□□□□□ -0.79
SMCHD1-210ENST00000583800 EYA3Q99504 573 aa10.11□□□□□ -0.79
SMCHD1-210ENST00000583800 SLC4A5Q9BY07 1137 aa10.11□□□□□ -0.79
SMCHD1-210ENST00000583800 KDM4CQ9H3R0 1056 aa10.11□□□□□ -0.79
SMCHD1-210ENST00000583800 C1orf115Q9H7X2 142 aa10.11□□□□□ -0.79
SMCHD1-210ENST00000583800 MBIPQ9NS73 344 aa10.11□□□□□ -0.79
SMCHD1-210ENST00000583800 HYPKQ9NX55 129 aa10.11□□□□□ -0.79
SMCHD1-210ENST00000583800 RPS12P25398 132 aaKnown RBP10.1□□□□□ -0.79
SMCHD1-210ENST00000583800 RPS8P62241 208 aaKnown RBP10.1□□□□□ -0.79
SMCHD1-210ENST00000583800 MLLT1Q03111 559 aaPredicted RBP10.1□□□□□ -0.79
SMCHD1-210ENST00000583800 DDX10Q13206 875 aaKnown RBP10.1□□□□□ -0.79
SMCHD1-210ENST00000583800 KIF4BQ2VIQ3 1234 aa10.1□□□□□ -0.79
SMCHD1-210ENST00000583800 RGMBQ6NW40 437 aa10.1□□□□□ -0.79
SMCHD1-210ENST00000583800 THSD4Q6ZMP0 1018 aa10.1□□□□□ -0.79
SMCHD1-210ENST00000583800 RIC3Q7Z5B4 369 aa10.1□□□□□ -0.79
SMCHD1-210ENST00000583800 PHAXQ9H814 394 aaKnown RBP10.1□□□□□ -0.79
SMCHD1-210ENST00000583800 GBA2Q9HCG7 927 aaPredicted RBP10.1□□□□□ -0.79
SMCHD1-210ENST00000583800 SEC31BQ9NQW1 1179 aa10.1□□□□□ -0.79
SMCHD1-210ENST00000583800 ADAMTS8Q9UP79 889 aa10.1□□□□□ -0.79
SMCHD1-210ENST00000583800 ASTN2O75129 1339 aaPredicted RBP10.09□□□□□ -0.79
SMCHD1-210ENST00000583800 FAM155AB1AL88 458 aaPredicted RBP10.09□□□□□ -0.79
SMCHD1-210ENST00000583800 BHMG1C9JSJ3 638 aaPredicted RBP10.09□□□□□ -0.79
SMCHD1-210ENST00000583800 UFL1O94874 794 aa10.09□□□□□ -0.79
SMCHD1-210ENST00000583800 TRIM28Q13263 835 aaKnown RBP10.09□□□□□ -0.79
SMCHD1-210ENST00000583800 DGKZQ13574 1117 aa10.09□□□□□ -0.79
SMCHD1-210ENST00000583800 ZBTB38Q8NAP3 1195 aaPredicted RBP10.09□□□□□ -0.79
SMCHD1-210ENST00000583800 DCPSQ96C86 337 aaKnown RBP10.09□□□□□ -0.79
SMCHD1-210ENST00000583800 CCDC85AQ96PX6 553 aaPredicted RBP10.09□□□□□ -0.79
SMCHD1-210ENST00000583800 MYD88Q99836 296 aa10.09□□□□□ -0.79
SMCHD1-210ENST00000583800 GGA3Q9NZ52 723 aa10.09□□□□□ -0.79
SMCHD1-210ENST00000583800 ELL2O00472 640 aaPredicted RBP10.08□□□□□ -0.8
SMCHD1-210ENST00000583800 VIL1P09327 827 aaKnown RBP10.08□□□□□ -0.8
SMCHD1-210ENST00000583800 RGS19P49795 217 aa10.08□□□□□ -0.8
SMCHD1-210ENST00000583800 C2orf69Q8N8R5 385 aa10.08□□□□□ -0.8
SMCHD1-210ENST00000583800 JARID2Q92833 1246 aaPredicted RBP10.08□□□□□ -0.8
SMCHD1-210ENST00000583800 LARP6Q9BRS8 491 aaKnown RBP10.08□□□□□ -0.8
SMCHD1-210ENST00000583800 ZC3H12CQ9C0D7 883 aaKnown RBP10.08□□□□□ -0.8
SMCHD1-210ENST00000583800 ANKIB1Q9P2G1 1089 aa10.08□□□□□ -0.8
SMCHD1-210ENST00000583800 PAPPA2Q9BXP8 1791 aa10.08□□□□□ -0.8
SMCHD1-210ENST00000583800 ZNF853P0CG23 659 aa10.07□□□□□ -0.8
SMCHD1-210ENST00000583800 ZNF157P51786 506 aaPredicted RBP10.07□□□□□ -0.8
SMCHD1-210ENST00000583800 KIF23Q02241 960 aaPredicted RBP10.07□□□□□ -0.8
SMCHD1-210ENST00000583800 SULF1Q8IWU6 871 aa10.07□□□□□ -0.8
SMCHD1-210ENST00000583800 ZNF454Q8N9F8 522 aa10.07□□□□□ -0.8
SMCHD1-210ENST00000583800 OXER1Q8TDS5 423 aa10.07□□□□□ -0.8
SMCHD1-210ENST00000583800 CDCA5Q96FF9 252 aa10.07□□□□□ -0.8
SMCHD1-210ENST00000583800 ARID3AQ99856 593 aa10.07□□□□□ -0.8
SMCHD1-210ENST00000583800 CRISPLD2Q9H0B8 497 aa10.07□□□□□ -0.8
SMCHD1-210ENST00000583800 GGA1Q9UJY5 639 aa10.07□□□□□ -0.8
SMCHD1-210ENST00000583800 ZNF609O15014 1411 aa10.07□□□□□ -0.8
SMCHD1-210ENST00000583800 PDE8AO60658 829 aa10.06□□□□□ -0.8
SMCHD1-210ENST00000583800 PCCAP05165 728 aaPredicted RBP10.06□□□□□ -0.8
SMCHD1-210ENST00000583800 SLC10A3P09131 477 aa10.06□□□□□ -0.8
SMCHD1-210ENST00000583800 PDE4AP27815 886 aa10.06□□□□□ -0.8
SMCHD1-210ENST00000583800 CCDC152Q4G0S7 254 aa10.06□□□□□ -0.8
SMCHD1-210ENST00000583800 ANGEL2Q5VTE6 544 aaKnown RBP10.06□□□□□ -0.8
SMCHD1-210ENST00000583800 RSBN1LQ6PCB5 846 aaPredicted RBP10.06□□□□□ -0.8
SMCHD1-210ENST00000583800 CCDC102AQ96A19 550 aa10.06□□□□□ -0.8
SMCHD1-210ENST00000583800 IFT57Q9NWB7 429 aa10.06□□□□□ -0.8
SMCHD1-210ENST00000583800 SAGE1Q9NXZ1 904 aa10.06□□□□□ -0.8
SMCHD1-210ENST00000583800 SCAF8Q9UPN6 1271 aaKnown RBP10.06□□□□□ -0.8
SMCHD1-210ENST00000583800 PDE4DIPQ5VU43 2346 aa10.05□□□□□ -0.8
SMCHD1-210ENST00000583800 APAF1O14727 1248 aa10.05□□□□□ -0.8
SMCHD1-210ENST00000583800 TRPA1O75762 1119 aa10.05□□□□□ -0.8
SMCHD1-210ENST00000583800 ZNF280AP59817 542 aaPredicted RBP10.05□□□□□ -0.8
SMCHD1-210ENST00000583800 GNAI1P63096 354 aa10.05□□□□□ -0.8
SMCHD1-210ENST00000583800 SCARF1Q14162 830 aa10.05□□□□□ -0.8
SMCHD1-210ENST00000583800 ANKRD18AQ8IVF6 992 aa10.05□□□□□ -0.8
SMCHD1-210ENST00000583800 C8orf58Q8NAV2 365 aa10.05□□□□□ -0.8
SMCHD1-210ENST00000583800 CCDC191Q8NCU4 936 aa10.05□□□□□ -0.8
SMCHD1-210ENST00000583800 AGBL3Q8NEM8 1001 aa10.05□□□□□ -0.8
SMCHD1-210ENST00000583800 METTL22Q9BUU2 404 aaPredicted RBP10.05□□□□□ -0.8
SMCHD1-210ENST00000583800 CWC25Q9NXE8 425 aaPredicted RBP10.05□□□□□ -0.8
SMCHD1-210ENST00000583800 RNF186Q9NXI6 227 aa10.05□□□□□ -0.8
SMCHD1-210ENST00000583800 A0A1B0GUL6 1792 aa10.05□□□□□ -0.8
SMCHD1-210ENST00000583800 XDHP47989 1333 aa10.05□□□□□ -0.8
SMCHD1-210ENST00000583800 WTIPA6NIX2 430 aaPredicted RBP10.04□□□□□ -0.8
SMCHD1-210ENST00000583800 GOLGA8CPA6NN73 597 aa10.04□□□□□ -0.8
SMCHD1-210ENST00000583800 TRIM66O15016 1216 aa10.04□□□□□ -0.8
SMCHD1-210ENST00000583800 HSP90B1P14625 803 aaKnown RBP10.04□□□□□ -0.8
SMCHD1-210ENST00000583800 RASAL3Q86YV0 1011 aa10.04□□□□□ -0.8
SMCHD1-210ENST00000583800 KRI1Q8N9T8 703 aaKnown RBP10.04□□□□□ -0.8
SMCHD1-210ENST00000583800 WNT2BQ93097 391 aa10.04□□□□□ -0.8
SMCHD1-210ENST00000583800 CSRNP1Q96S65 589 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms