RNA–Protein interactions for RNA: ENST00000583391.1

ERBB2-215, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-215ENST00000583391 KDM2BQ8NHM5 1336 aa15.97■□□□□ 0.15
ERBB2-215ENST00000583391 USP17L3A6NCW0 530 aa15.97■□□□□ 0.15
ERBB2-215ENST00000583391 USP17L4A6NCW7 530 aa15.97■□□□□ 0.15
ERBB2-215ENST00000583391 ARID4AP29374 1257 aaPredicted RBP15.97■□□□□ 0.15
ERBB2-215ENST00000583391 RASGRF1Q13972 1273 aa15.97■□□□□ 0.15
ERBB2-215ENST00000583391 CCDC158Q5M9N0 1113 aa15.97■□□□□ 0.15
ERBB2-215ENST00000583391 USP17L1Q7RTZ2 530 aa15.97■□□□□ 0.15
ERBB2-215ENST00000583391 DDNO94850 711 aaPredicted RBP15.96■□□□□ 0.15
ERBB2-215ENST00000583391 NUCB1Q02818 461 aa15.96■□□□□ 0.15
ERBB2-215ENST00000583391 TNIP1Q15025 636 aa15.96■□□□□ 0.15
ERBB2-215ENST00000583391 TTLL5Q6EMB2 1281 aa15.96■□□□□ 0.15
ERBB2-215ENST00000583391 PI16Q6UXB8 463 aa15.96■□□□□ 0.15
ERBB2-215ENST00000583391 GPC2Q8N158 579 aa15.96■□□□□ 0.15
ERBB2-215ENST00000583391 OTUD7AQ8TE49 926 aaPredicted RBP15.96■□□□□ 0.15
ERBB2-215ENST00000583391 ZNF526Q8TF50 670 aaPredicted RBP15.96■□□□□ 0.15
ERBB2-215ENST00000583391 MXD3Q9BW11 206 aa15.96■□□□□ 0.15
ERBB2-215ENST00000583391 PPP4R2Q9NY27 417 aa15.96■□□□□ 0.15
ERBB2-215ENST00000583391 GLTPD2A6NH11 291 aa15.95■□□□□ 0.14
ERBB2-215ENST00000583391 SEMA3EO15041 775 aa15.95■□□□□ 0.14
ERBB2-215ENST00000583391 UQCRFS1P1P0C7P4 283 aa15.95■□□□□ 0.14
ERBB2-215ENST00000583391 MCAMP43121 646 aa15.95■□□□□ 0.14
ERBB2-215ENST00000583391 SCARF1Q14162 830 aa15.95■□□□□ 0.14
ERBB2-215ENST00000583391 DACT2Q5SW24 774 aa15.95■□□□□ 0.14
ERBB2-215ENST00000583391 STRIP1Q5VSL9 837 aa15.95■□□□□ 0.14
ERBB2-215ENST00000583391 TSHZ3Q63HK5 1081 aa15.95■□□□□ 0.14
ERBB2-215ENST00000583391 DPY19L2Q6NUT2 758 aa15.95■□□□□ 0.14
ERBB2-215ENST00000583391 CENPQQ7L2Z9 268 aaPredicted RBP15.95■□□□□ 0.14
ERBB2-215ENST00000583391 CHD1LQ86WJ1 897 aa15.95■□□□□ 0.14
ERBB2-215ENST00000583391 C16orf71Q8IYS4 520 aaPredicted RBP15.95■□□□□ 0.14
ERBB2-215ENST00000583391 DENND2AQ9ULE3 1009 aa15.95■□□□□ 0.14
ERBB2-215ENST00000583391 ZBTB12Q9Y330 459 aaPredicted RBP15.95■□□□□ 0.14
ERBB2-215ENST00000583391 FAM205AQ6ZU69 1335 aa15.94■□□□□ 0.14
ERBB2-215ENST00000583391 VIL1P09327 827 aaKnown RBP15.94■□□□□ 0.14
ERBB2-215ENST00000583391 YY1P25490 414 aa15.94■□□□□ 0.14
ERBB2-215ENST00000583391 GMPSP49915 693 aaPredicted RBP15.94■□□□□ 0.14
ERBB2-215ENST00000583391 RSBN1LQ6PCB5 846 aaPredicted RBP15.94■□□□□ 0.14
ERBB2-215ENST00000583391 GPATCH3Q96I76 525 aa15.94■□□□□ 0.14
ERBB2-215ENST00000583391 MX1P20591 662 aa15.93■□□□□ 0.14
ERBB2-215ENST00000583391 MFSD14BQ5SR56 506 aa15.93■□□□□ 0.14
ERBB2-215ENST00000583391 CERS5Q8N5B7 392 aa15.93■□□□□ 0.14
ERBB2-215ENST00000583391 SPATA5Q8NB90 893 aa15.93■□□□□ 0.14
ERBB2-215ENST00000583391 SNRKQ9NRH2 765 aa15.93■□□□□ 0.14
ERBB2-215ENST00000583391 HMG20BQ9P0W2 317 aa15.93■□□□□ 0.14
ERBB2-215ENST00000583391 NDUFB9Q9Y6M9 179 aa15.93■□□□□ 0.14
ERBB2-215ENST00000583391 POLR2AP24928 1970 aaKnown RBP15.93■□□□□ 0.14
ERBB2-215ENST00000583391 PDS5AQ29RF7 1337 aaKnown RBP15.93■□□□□ 0.14
ERBB2-215ENST00000583391 MYO3BQ8WXR4 1341 aa15.93■□□□□ 0.14
ERBB2-215ENST00000583391 SCNN1DP51172 638 aa15.92■□□□□ 0.14
ERBB2-215ENST00000583391 ZNF512BQ96KM6 892 aaPredicted RBP15.92■□□□□ 0.14
ERBB2-215ENST00000583391 ECHDC1Q9NTX5 307 aa15.92■□□□□ 0.14
ERBB2-215ENST00000583391 SALL3Q9BXA9 1300 aa15.92■□□□□ 0.14
ERBB2-215ENST00000583391 CDK5RAP2Q96SN8 1893 aa15.91■□□□□ 0.14
ERBB2-215ENST00000583391 SHTN1A0MZ66 631 aa15.91■□□□□ 0.14
ERBB2-215ENST00000583391 F8W031 263 aaPredicted RBP15.91■□□□□ 0.14
ERBB2-215ENST00000583391 RPS12P25398 132 aaKnown RBP15.91■□□□□ 0.14
ERBB2-215ENST00000583391 AGBL3Q8NEM8 1001 aa15.91■□□□□ 0.14
ERBB2-215ENST00000583391 WDR66Q8TBY9 1149 aa15.91■□□□□ 0.14
ERBB2-215ENST00000583391 TBC1D22AQ8WUA7 517 aa15.91■□□□□ 0.14
ERBB2-215ENST00000583391 L3MBTL3Q96JM7 780 aaPredicted RBP15.91■□□□□ 0.14
ERBB2-215ENST00000583391 DNAJC2Q99543 621 aaKnown RBP15.91■□□□□ 0.14
ERBB2-215ENST00000583391 ZBTB22O15209 634 aa15.9■□□□□ 0.14
ERBB2-215ENST00000583391 LMOD1P29536 600 aaPredicted RBP15.9■□□□□ 0.14
ERBB2-215ENST00000583391 ZAP70P43403 619 aa15.9■□□□□ 0.14
ERBB2-215ENST00000583391 FKBP1AP62942 108 aaKnown RBP15.9■□□□□ 0.14
ERBB2-215ENST00000583391 GRIK5Q16478 980 aa15.9■□□□□ 0.14
ERBB2-215ENST00000583391 KIAA0825Q8IV33 1275 aa15.9■□□□□ 0.14
ERBB2-215ENST00000583391 MICALL2Q8IY33 904 aa15.9■□□□□ 0.14
ERBB2-215ENST00000583391 GMLQ99445 158 aa15.9■□□□□ 0.14
ERBB2-215ENST00000583391 BOLA2Q9H3K6 86 aa15.9■□□□□ 0.14
ERBB2-215ENST00000583391 TTC41PQ6P2S7 1318 aa15.9■□□□□ 0.14
ERBB2-215ENST00000583391 SALL1Q9NSC2 1324 aa15.9■□□□□ 0.14
ERBB2-215ENST00000583391 ATP5JP18859 108 aa15.89■□□□□ 0.13
ERBB2-215ENST00000583391 PDE4AP27815 886 aa15.89■□□□□ 0.13
ERBB2-215ENST00000583391 TBC1D9Q6ZT07 1266 aa15.89■□□□□ 0.13
ERBB2-215ENST00000583391 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.89■□□□□ 0.13
ERBB2-215ENST00000583391 NMRK2Q9NPI5 230 aa15.89■□□□□ 0.13
ERBB2-215ENST00000583391 GPRC5DQ9NZD1 345 aa15.89■□□□□ 0.13
ERBB2-215ENST00000583391 ABCF2Q9UG63 623 aa15.89■□□□□ 0.13
ERBB2-215ENST00000583391 CYP2E1P05181 493 aaPredicted RBP15.88■□□□□ 0.13
ERBB2-215ENST00000583391 PRDX5P30044 214 aa15.88■□□□□ 0.13
ERBB2-215ENST00000583391 EPS15P42566 896 aa15.88■□□□□ 0.13
ERBB2-215ENST00000583391 PDE1AP54750 535 aa15.88■□□□□ 0.13
ERBB2-215ENST00000583391 ZGPATQ8N5A5 531 aaKnown RBP15.88■□□□□ 0.13
ERBB2-215ENST00000583391 PI4K2BQ8TCG2 481 aa15.88■□□□□ 0.13
ERBB2-215ENST00000583391 DPF2Q92785 391 aa15.88■□□□□ 0.13
ERBB2-215ENST00000583391 CNOT7Q9UIV1 285 aaKnown RBP15.88■□□□□ 0.13
ERBB2-215ENST00000583391 HACL1Q9UJ83 578 aa15.88■□□□□ 0.13
ERBB2-215ENST00000583391 TTF2Q9UNY4 1162 aaKnown RBP15.88■□□□□ 0.13
ERBB2-215ENST00000583391 FOCADQ5VW36 1801 aa15.88■□□□□ 0.13
ERBB2-215ENST00000583391 IQCA1LA6NCM1 817 aa15.87■□□□□ 0.13
ERBB2-215ENST00000583391 GOLIM4O00461 696 aa15.87■□□□□ 0.13
ERBB2-215ENST00000583391 ERC2O15083 957 aa15.87■□□□□ 0.13
ERBB2-215ENST00000583391 LDHBP07195 334 aaKnown RBP15.87■□□□□ 0.13
ERBB2-215ENST00000583391 USP17L8P0C7I0 530 aa15.87■□□□□ 0.13
ERBB2-215ENST00000583391 SKAP1Q86WV1 359 aa15.87■□□□□ 0.13
ERBB2-215ENST00000583391 PLEKHM2Q8IWE5 1019 aa15.87■□□□□ 0.13
ERBB2-215ENST00000583391 EDC3Q96F86 508 aaKnown RBP15.87■□□□□ 0.13
ERBB2-215ENST00000583391 HAUS7Q99871 368 aa15.87■□□□□ 0.13
ERBB2-215ENST00000583391 ANTXR1Q9H6X2 564 aa15.87■□□□□ 0.13
ERBB2-215ENST00000583391 RRAGCQ9HB90 399 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms