RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 F8W031 263 aaPredicted RBP20.64■□□□□ 0.89
SREBF1-221ENST00000583080 LINS1Q8NG48 757 aa20.64■□□□□ 0.89
SREBF1-221ENST00000583080 PCDH10Q9P2E7 1040 aa20.64■□□□□ 0.89
SREBF1-221ENST00000583080 JAG2Q9Y219 1238 aa20.64■□□□□ 0.89
SREBF1-221ENST00000583080 FANCIQ9NVI1 1328 aa20.63■□□□□ 0.89
SREBF1-221ENST00000583080 CLRN2A0PK11 232 aa20.63■□□□□ 0.89
SREBF1-221ENST00000583080 ANKRD18BA2A2Z9 1011 aa20.63■□□□□ 0.89
SREBF1-221ENST00000583080 HTTP42858 3142 aa20.62■□□□□ 0.89
SREBF1-221ENST00000583080 MAP3K11Q16584 847 aa20.62■□□□□ 0.89
SREBF1-221ENST00000583080 IFNL1Q8IU54 200 aa20.62■□□□□ 0.89
SREBF1-221ENST00000583080 MTMR14Q8NCE2 650 aa20.62■□□□□ 0.89
SREBF1-221ENST00000583080 WNK4Q96J92 1243 aa20.62■□□□□ 0.89
SREBF1-221ENST00000583080 SPDYE2BA6NHP3 402 aa20.61■□□□□ 0.89
SREBF1-221ENST00000583080 MANSC4A6NHS7 340 aaPredicted RBP20.61■□□□□ 0.89
SREBF1-221ENST00000583080 IGF2BP3O00425 579 aaKnown RBP eCLIP20.61■□□□□ 0.89
SREBF1-221ENST00000583080 SPDYE6P0CI01 402 aa20.61■□□□□ 0.89
SREBF1-221ENST00000583080 FOXO4P98177 505 aa20.61■□□□□ 0.89
SREBF1-221ENST00000583080 CFAP100Q494V2 611 aa20.61■□□□□ 0.89
SREBF1-221ENST00000583080 C15orf52Q6ZUT6 534 aaKnown RBP20.61■□□□□ 0.89
SREBF1-221ENST00000583080 SLC10A4Q96EP9 437 aa20.61■□□□□ 0.89
SREBF1-221ENST00000583080 CHMP3Q9Y3E7 222 aa20.61■□□□□ 0.89
SREBF1-221ENST00000583080 OTOFQ9HC10 1997 aa20.61■□□□□ 0.89
SREBF1-221ENST00000583080 IL16Q14005 1332 aa20.6■□□□□ 0.89
SREBF1-221ENST00000583080 ALDH1A1P00352 501 aa20.6■□□□□ 0.89
SREBF1-221ENST00000583080 IL1R1P14778 569 aa20.6■□□□□ 0.89
SREBF1-221ENST00000583080 VEZTQ9HBM0 779 aa20.6■□□□□ 0.89
SREBF1-221ENST00000583080 F6X3S4 739 aa20.59■□□□□ 0.89
SREBF1-221ENST00000583080 ZBTB48P10074 688 aaPredicted RBP20.59■□□□□ 0.89
SREBF1-221ENST00000583080 GJA5P36382 358 aa20.59■□□□□ 0.89
SREBF1-221ENST00000583080 IFIT5Q13325 482 aaKnown RBP20.59■□□□□ 0.89
SREBF1-221ENST00000583080 EPHA10Q5JZY3 1008 aa20.59■□□□□ 0.89
SREBF1-221ENST00000583080 NBPF12Q5TAG4 269 aaPredicted RBP20.59■□□□□ 0.89
SREBF1-221ENST00000583080 ZNF804AQ7Z570 1209 aa20.59■□□□□ 0.89
SREBF1-221ENST00000583080 PRMT6Q96LA8 375 aaPredicted RBP20.59■□□□□ 0.89
SREBF1-221ENST00000583080 TRIM17Q9Y577 477 aa20.59■□□□□ 0.89
SREBF1-221ENST00000583080 PPP2R3BQ9Y5P8 575 aa20.59■□□□□ 0.89
SREBF1-221ENST00000583080 CACNA1FO60840 1977 aa20.59■□□□□ 0.89
SREBF1-221ENST00000583080 OTOP1Q7RTM1 612 aa20.58■□□□□ 0.89
SREBF1-221ENST00000583080 ZNF594Q96JF6 807 aaPredicted RBP20.58■□□□□ 0.89
SREBF1-221ENST00000583080 PPP1R12BO60237 982 aaPredicted RBP20.57■□□□□ 0.88
SREBF1-221ENST00000583080 VAMP4O75379 141 aa20.57■□□□□ 0.88
SREBF1-221ENST00000583080 BEND3Q5T5X7 828 aa20.57■□□□□ 0.88
SREBF1-221ENST00000583080 ARAP2Q8WZ64 1704 aa20.56■□□□□ 0.88
SREBF1-221ENST00000583080 MYO1BO43795 1136 aa20.56■□□□□ 0.88
SREBF1-221ENST00000583080 FKBP1AP62942 108 aaKnown RBP20.56■□□□□ 0.88
SREBF1-221ENST00000583080 LMBR1LQ6UX01 489 aa20.56■□□□□ 0.88
SREBF1-221ENST00000583080 POTEFA5A3E0 1075 aa20.55■□□□□ 0.88
SREBF1-221ENST00000583080 PLIN1O60240 522 aa20.55■□□□□ 0.88
SREBF1-221ENST00000583080 USP2O75604 605 aaPredicted RBP20.55■□□□□ 0.88
SREBF1-221ENST00000583080 RBM5P52756 815 aaKnown RBP eCLIP20.55■□□□□ 0.882e-6■□□□□ 9.6
SREBF1-221ENST00000583080 INHBEP58166 350 aa20.55■□□□□ 0.88
SREBF1-221ENST00000583080 EXOSC9Q06265 439 aaKnown RBP20.55■□□□□ 0.88
SREBF1-221ENST00000583080 CRHR2Q13324 411 aa20.55■□□□□ 0.88
SREBF1-221ENST00000583080 RASA3Q14644 834 aa20.55■□□□□ 0.88
SREBF1-221ENST00000583080 SUPT20HL1Q3ZLR7 823 aa20.55■□□□□ 0.88
SREBF1-221ENST00000583080 IREB2P48200 963 aaKnown RBP20.54■□□□□ 0.88
SREBF1-221ENST00000583080 CAP1Q01518 475 aa20.54■□□□□ 0.88
SREBF1-221ENST00000583080 CDAN1Q8IWY9 1227 aa20.54■□□□□ 0.88
SREBF1-221ENST00000583080 CD99L2Q8TCZ2 262 aa20.54■□□□□ 0.88
SREBF1-221ENST00000583080 PTPN18Q99952 460 aa20.53■□□□□ 0.88
SREBF1-221ENST00000583080 SALL2Q9Y467 1007 aaPredicted RBP20.53■□□□□ 0.88
SREBF1-221ENST00000583080 RBBP6Q7Z6E9 1792 aaKnown RBP20.53■□□□□ 0.88
SREBF1-221ENST00000583080 UNCXA6NJT0 531 aa20.52■□□□□ 0.88
SREBF1-221ENST00000583080 SPDYE2Q495Y8 402 aa20.52■□□□□ 0.88
SREBF1-221ENST00000583080 TAF7LQ5H9L4 462 aa20.52■□□□□ 0.88
SREBF1-221ENST00000583080 LDHAL6AQ6ZMR3 332 aa20.52■□□□□ 0.88
SREBF1-221ENST00000583080 ANKRD13AQ8IZ07 590 aa20.52■□□□□ 0.88
SREBF1-221ENST00000583080 ELP3Q9H9T3 547 aa20.52■□□□□ 0.88
SREBF1-221ENST00000583080 CNNM1Q9NRU3 951 aa20.52■□□□□ 0.88
SREBF1-221ENST00000583080 FAM205AQ6ZU69 1335 aa20.52■□□□□ 0.87
SREBF1-221ENST00000583080 GRM8O00222 908 aa20.51■□□□□ 0.87
SREBF1-221ENST00000583080 GYG1P46976 350 aa20.51■□□□□ 0.87
SREBF1-221ENST00000583080 CCDC57Q2TAC2 916 aa20.51■□□□□ 0.87
SREBF1-221ENST00000583080 MFSD14BQ5SR56 506 aa20.51■□□□□ 0.87
SREBF1-221ENST00000583080 ERO1AQ96HE7 468 aa20.51■□□□□ 0.87
SREBF1-221ENST00000583080 SPINK5Q9NQ38 1064 aaPredicted RBP20.51■□□□□ 0.87
SREBF1-221ENST00000583080 ZNF70Q9UC06 446 aaPredicted RBP20.51■□□□□ 0.87
SREBF1-221ENST00000583080 PTPN22Q9Y2R2 807 aa20.51■□□□□ 0.87
SREBF1-221ENST00000583080 MKI67P46013 3256 aaKnown RBP20.51■□□□□ 0.87
SREBF1-221ENST00000583080 NCBP3Q53F19 620 aaKnown RBP20.5■□□□□ 0.87
SREBF1-221ENST00000583080 TDRD7Q8NHU6 1098 aaKnown RBP20.5■□□□□ 0.87
SREBF1-221ENST00000583080 CNKSR2Q8WXI2 1034 aa20.5■□□□□ 0.87
SREBF1-221ENST00000583080 OPTNQ96CV9 577 aa20.5■□□□□ 0.87
SREBF1-221ENST00000583080 TEPSINQ96N21 525 aa20.5■□□□□ 0.87
SREBF1-221ENST00000583080 TDRD3Q9H7E2 651 aaKnown RBP20.5■□□□□ 0.87
SREBF1-221ENST00000583080 TTF2Q9UNY4 1162 aaKnown RBP20.5■□□□□ 0.87
SREBF1-221ENST00000583080 CENPFP49454 3210 aa20.49■□□□□ 0.87
SREBF1-221ENST00000583080 KIAA0100Q14667 2235 aaKnown RBP20.49■□□□□ 0.87
SREBF1-221ENST00000583080 TESPA1A2RU30 521 aaPredicted RBP20.49■□□□□ 0.87
SREBF1-221ENST00000583080 PUS3Q9BZE2 481 aaKnown RBP20.49■□□□□ 0.87
SREBF1-221ENST00000583080 TNFAIP1Q13829 316 aa20.48■□□□□ 0.87
SREBF1-221ENST00000583080 GRIK5Q16478 980 aa20.48■□□□□ 0.87
SREBF1-221ENST00000583080 INTS3Q68E01 1043 aaKnown RBP20.48■□□□□ 0.87
SREBF1-221ENST00000583080 OTUD7BQ6GQQ9 843 aa20.48■□□□□ 0.87
SREBF1-221ENST00000583080 WDR63Q8IWG1 891 aa20.48■□□□□ 0.87
SREBF1-221ENST00000583080 MS4A4AQ96JQ5 239 aa20.48■□□□□ 0.87
SREBF1-221ENST00000583080 EFCC1Q9HA90 598 aa20.48■□□□□ 0.87
SREBF1-221ENST00000583080 SERPINA10Q9UK55 444 aa20.48■□□□□ 0.87
SREBF1-221ENST00000583080 BRCA2P51587 3418 aa20.47■□□□□ 0.87
SREBF1-221ENST00000583080 TCP10L2B9ZVM9 353 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms