RNA–Protein interactions for RNA: ENST00000583043.5

RTTN-209, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,278 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-209ENST00000583043 PA2G4Q9UQ80 394 aaKnown RBP6.74□□□□□ -1.33
RTTN-209ENST00000583043 A0A1B0GUL7 405 aa6.74□□□□□ -1.33
RTTN-209ENST00000583043 IL6STP40189 918 aaPredicted RBP6.74□□□□□ -1.33
RTTN-209ENST00000583043 RABL6Q3YEC7 729 aaPredicted RBP6.74□□□□□ -1.33
RTTN-209ENST00000583043 DDX46Q7L014 1031 aaKnown RBP6.74□□□□□ -1.33
RTTN-209ENST00000583043 KCNB2Q92953 911 aa6.74□□□□□ -1.33
RTTN-209ENST00000583043 EAF2Q96CJ1 260 aaPredicted RBP6.74□□□□□ -1.33
RTTN-209ENST00000583043 TIGD1Q96MW7 591 aa6.74□□□□□ -1.33
RTTN-209ENST00000583043 ANGEL1Q9UNK9 670 aaKnown RBP6.74□□□□□ -1.33
RTTN-209ENST00000583043 ABCC6O95255 1503 aa6.74□□□□□ -1.33
RTTN-209ENST00000583043 ATP5J2-PTCD1G3V325 749 aa6.74□□□□□ -1.33
RTTN-209ENST00000583043 CUTAO60888 179 aa6.74□□□□□ -1.33
RTTN-209ENST00000583043 EIF3JO75822 258 aaKnown RBP6.74□□□□□ -1.33
RTTN-209ENST00000583043 DDIT3P35638 169 aa6.74□□□□□ -1.33
RTTN-209ENST00000583043 DNM1Q05193 864 aaKnown RBP6.74□□□□□ -1.33
RTTN-209ENST00000583043 NOLC1Q14978 699 aaKnown RBP eCLIP6.74□□□□□ -1.33
RTTN-209ENST00000583043 FERMT3Q86UX7 667 aa6.74□□□□□ -1.33
RTTN-209ENST00000583043 CNNM3Q8NE01 707 aa6.74□□□□□ -1.33
RTTN-209ENST00000583043 PIBF1Q8WXW3 757 aa6.74□□□□□ -1.33
RTTN-209ENST00000583043 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP6.74□□□□□ -1.33
RTTN-209ENST00000583043 DEXIO95424 95 aa6.74□□□□□ -1.33
RTTN-209ENST00000583043 SYKP43405 635 aa6.74□□□□□ -1.33
RTTN-209ENST00000583043 SLC39A6Q13433 755 aa6.74□□□□□ -1.33
RTTN-209ENST00000583043 NECTIN1Q15223 517 aa6.74□□□□□ -1.33
RTTN-209ENST00000583043 RTN1Q16799 776 aa6.74□□□□□ -1.33
RTTN-209ENST00000583043 TRIML1Q8N9V2 468 aa6.74□□□□□ -1.33
RTTN-209ENST00000583043 CDK5RAP3Q96JB5 506 aa6.74□□□□□ -1.33
RTTN-209ENST00000583043 PLA2G12BQ9BX93 195 aa6.74□□□□□ -1.33
RTTN-209ENST00000583043 DACT1Q9NYF0 836 aa6.74□□□□□ -1.33
RTTN-209ENST00000583043 MTMR6Q9Y217 621 aa6.74□□□□□ -1.33
RTTN-209ENST00000583043 TAF5LO75529 589 aa6.73□□□□□ -1.33
RTTN-209ENST00000583043 HSP90B2PQ58FF3 399 aa6.73□□□□□ -1.33
RTTN-209ENST00000583043 DZIP3Q86Y13 1208 aaKnown RBP6.73□□□□□ -1.33
RTTN-209ENST00000583043 ALG1Q9BT22 464 aa6.73□□□□□ -1.33
RTTN-209ENST00000583043 TOP1P11387 765 aaKnown RBP6.73□□□□□ -1.33
RTTN-209ENST00000583043 MCTP2Q6DN12 878 aa6.73□□□□□ -1.33
RTTN-209ENST00000583043 SLAIN2Q9P270 581 aa6.73□□□□□ -1.33
RTTN-209ENST00000583043 TRIM14Q14142 442 aa6.73□□□□□ -1.33
RTTN-209ENST00000583043 DDB1Q16531 1140 aa6.73□□□□□ -1.33
RTTN-209ENST00000583043 SLC9C2Q5TAH2 1124 aa6.73□□□□□ -1.33
RTTN-209ENST00000583043 FMNL3Q8IVF7 1028 aa6.73□□□□□ -1.33
RTTN-209ENST00000583043 LEO1Q8WVC0 666 aaPredicted RBP6.73□□□□□ -1.33
RTTN-209ENST00000583043 MRFAP1L1Q96HT8 127 aa6.73□□□□□ -1.33
RTTN-209ENST00000583043 PKNOX2Q96KN3 472 aa6.73□□□□□ -1.33
RTTN-209ENST00000583043 CWC15Q9P013 229 aaKnown RBP6.73□□□□□ -1.33
RTTN-209ENST00000583043 LMTK3Q96Q04 1460 aa6.73□□□□□ -1.33
RTTN-209ENST00000583043 MAP3K15Q6ZN16 1313 aa6.73□□□□□ -1.33
RTTN-209ENST00000583043 ANXA1P04083 346 aa6.73□□□□□ -1.33
RTTN-209ENST00000583043 ADALQ6DHV7 355 aa6.73□□□□□ -1.33
RTTN-209ENST00000583043 GIGYF2Q6Y7W6 1299 aaKnown RBP6.73□□□□□ -1.33
RTTN-209ENST00000583043 ZNF512BQ96KM6 892 aaPredicted RBP6.73□□□□□ -1.33
RTTN-209ENST00000583043 DBNDD2Q9BQY9 259 aa6.73□□□□□ -1.33
RTTN-209ENST00000583043 TOM1O60784 492 aa6.73□□□□□ -1.33
RTTN-209ENST00000583043 HCLS1P14317 486 aaPredicted RBP6.73□□□□□ -1.33
RTTN-209ENST00000583043 TMEM266Q2M3C6 531 aa6.73□□□□□ -1.33
RTTN-209ENST00000583043 TSHZ3Q63HK5 1081 aa6.73□□□□□ -1.33
RTTN-209ENST00000583043 GALNT17Q6IS24 598 aa6.73□□□□□ -1.33
RTTN-209ENST00000583043 ZNF397Q8NF99 534 aaPredicted RBP6.73□□□□□ -1.33
RTTN-209ENST00000583043 ADCY9O60503 1353 aa6.72□□□□□ -1.33
RTTN-209ENST00000583043 MON2Q7Z3U7 1717 aa6.72□□□□□ -1.33
RTTN-209ENST00000583043 NOC3LQ8WTT2 800 aaKnown RBP6.72□□□□□ -1.33
RTTN-209ENST00000583043 XAGE2Q96GT9 111 aa6.72□□□□□ -1.33
RTTN-209ENST00000583043 PALLDQ8WX93 1383 aa6.72□□□□□ -1.33
RTTN-209ENST00000583043 SYCP1Q15431 976 aa6.72□□□□□ -1.33
RTTN-209ENST00000583043 MLKLQ8NB16 471 aa6.72□□□□□ -1.33
RTTN-209ENST00000583043 FERMT2Q96AC1 680 aa6.72□□□□□ -1.33
RTTN-209ENST00000583043 NLRP3Q96P20 1036 aa6.72□□□□□ -1.33
RTTN-209ENST00000583043 SNRKQ9NRH2 765 aa6.72□□□□□ -1.33
RTTN-209ENST00000583043 SEC63Q9UGP8 760 aaKnown RBP6.72□□□□□ -1.33
RTTN-209ENST00000583043 KIF1AQ12756 1690 aa6.72□□□□□ -1.33
RTTN-209ENST00000583043 RRP12Q5JTH9 1297 aaKnown RBP6.72□□□□□ -1.33
RTTN-209ENST00000583043 CCDC87Q9NVE4 849 aa6.72□□□□□ -1.33
RTTN-209ENST00000583043 C3P01024 1663 aa6.72□□□□□ -1.33
RTTN-209ENST00000583043 TRIM75PA6NK02 468 aa6.72□□□□□ -1.33
RTTN-209ENST00000583043 RBM6P78332 1123 aaKnown RBP6.72□□□□□ -1.33
RTTN-209ENST00000583043 CHRNA2Q15822 529 aa6.72□□□□□ -1.33
RTTN-209ENST00000583043 CFAP100Q494V2 611 aa6.72□□□□□ -1.33
RTTN-209ENST00000583043 ZNF592Q92610 1267 aa6.72□□□□□ -1.33
RTTN-209ENST00000583043 FEZ1Q99689 392 aa6.72□□□□□ -1.33
RTTN-209ENST00000583043 CCDC194A0A1B0GVG4 234 aa6.72□□□□□ -1.33
RTTN-209ENST00000583043 TPTE2Q6XPS3 522 aa6.72□□□□□ -1.33
RTTN-209ENST00000583043 TMC4Q7Z404 712 aa6.72□□□□□ -1.33
RTTN-209ENST00000583043 FCHSD1Q86WN1 690 aa6.72□□□□□ -1.33
RTTN-209ENST00000583043 RBSNQ9H1K0 784 aa6.72□□□□□ -1.33
RTTN-209ENST00000583043 ANO6Q4KMQ2 910 aa6.71□□□□□ -1.33
RTTN-209ENST00000583043 DZIP1Q86YF9 867 aaKnown RBP6.71□□□□□ -1.33
RTTN-209ENST00000583043 NUP133Q8WUM0 1156 aa6.71□□□□□ -1.33
RTTN-209ENST00000583043 TTC14Q96N46 770 aa6.71□□□□□ -1.33
RTTN-209ENST00000583043 EHMT1Q9H9B1 1298 aa6.71□□□□□ -1.33
RTTN-209ENST00000583043 TCEAL9Q9UHQ7 104 aa6.71□□□□□ -1.33
RTTN-209ENST00000583043 USPL1Q5W0Q7 1092 aa6.71□□□□□ -1.34
RTTN-209ENST00000583043 ZNF444Q8N0Y2 327 aaPredicted RBP6.71□□□□□ -1.34
RTTN-209ENST00000583043 RTEL1Q9NZ71 1219 aa6.71□□□□□ -1.34
RTTN-209ENST00000583043 NKX1-1Q15270 411 aaPredicted RBP6.71□□□□□ -1.34
RTTN-209ENST00000583043 ALX1Q15699 326 aa6.71□□□□□ -1.34
RTTN-209ENST00000583043 ANO1Q5XXA6 986 aa6.71□□□□□ -1.34
RTTN-209ENST00000583043 TDRD7Q8NHU6 1098 aaKnown RBP6.71□□□□□ -1.34
RTTN-209ENST00000583043 UBXN4Q92575 508 aa6.71□□□□□ -1.34
RTTN-209ENST00000583043 KIF2CQ99661 725 aa6.71□□□□□ -1.34
RTTN-209ENST00000583043 TCP11L1Q9NUJ3 509 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms