RNA–Protein interactions for RNA: ENST00000582453.5

MSI2-215, Transcript of musashi RNA binding protein 2, humanhuman

TSL 3

Gene MSI2, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-215ENST00000582453 COL19A1Q14993 1142 aa5.53□□□□□ -1.52
MSI2-215ENST00000582453 PRPF40BQ6NWY9 871 aaKnown RBP5.53□□□□□ -1.52
MSI2-215ENST00000582453 TXNDC11Q6PKC3 985 aa5.53□□□□□ -1.52
MSI2-215ENST00000582453 VN1R5Q7Z5H4 357 aa5.53□□□□□ -1.52
MSI2-215ENST00000582453 GALNT11Q8NCW6 608 aa5.53□□□□□ -1.52
MSI2-215ENST00000582453 FBF1Q8TES7 1133 aa5.53□□□□□ -1.52
MSI2-215ENST00000582453 MRPL18Q9H0U6 180 aaKnown RBP5.53□□□□□ -1.52
MSI2-215ENST00000582453 GZF1Q9H116 711 aaPredicted RBP5.53□□□□□ -1.52
MSI2-215ENST00000582453 SEC31BQ9NQW1 1179 aa5.53□□□□□ -1.52
MSI2-215ENST00000582453 NLRP2Q9NX02 1062 aa5.53□□□□□ -1.52
MSI2-215ENST00000582453 METTL12A8MUP2 240 aa5.52□□□□□ -1.53
MSI2-215ENST00000582453 EIF4EBP3O60516 100 aaPredicted RBP5.52□□□□□ -1.53
MSI2-215ENST00000582453 CD68P34810 354 aaPredicted RBP5.52□□□□□ -1.53
MSI2-215ENST00000582453 MAPK8P45983 427 aa5.52□□□□□ -1.53
MSI2-215ENST00000582453 GRIA4P48058 902 aa5.52□□□□□ -1.53
MSI2-215ENST00000582453 ARL4DP49703 201 aa5.52□□□□□ -1.53
MSI2-215ENST00000582453 ATP2B2Q01814 1243 aa5.52□□□□□ -1.53
MSI2-215ENST00000582453 IKBKEQ14164 716 aa5.52□□□□□ -1.53
MSI2-215ENST00000582453 ALG1LQ6GMV1 187 aa5.52□□□□□ -1.53
MSI2-215ENST00000582453 TXNRD3Q86VQ6 643 aa5.52□□□□□ -1.53
MSI2-215ENST00000582453 TMEM130Q8N3G9 435 aa5.52□□□□□ -1.53
MSI2-215ENST00000582453 EPS8L3Q8TE67 593 aaKnown RBP5.52□□□□□ -1.53
MSI2-215ENST00000582453 CARD10Q9BWT7 1032 aa5.52□□□□□ -1.53
MSI2-215ENST00000582453 CLEC4MQ9H2X3 399 aaPredicted RBP5.52□□□□□ -1.53
MSI2-215ENST00000582453 SOX17Q9H6I2 414 aaPredicted RBP5.52□□□□□ -1.53
MSI2-215ENST00000582453 SOX1O00570 391 aaPredicted RBP5.51□□□□□ -1.53
MSI2-215ENST00000582453 P4HBP07237 508 aaKnown RBP5.51□□□□□ -1.53
MSI2-215ENST00000582453 ESRRAP11474 423 aaPredicted RBP5.51□□□□□ -1.53
MSI2-215ENST00000582453 ITPKAP23677 461 aa5.51□□□□□ -1.53
MSI2-215ENST00000582453 PTPN12Q05209 780 aaKnown RBP5.51□□□□□ -1.53
MSI2-215ENST00000582453 C19orf57Q0VDD7 668 aa5.51□□□□□ -1.53
MSI2-215ENST00000582453 GRM2Q14416 872 aa5.51□□□□□ -1.53
MSI2-215ENST00000582453 SUZ12Q15022 739 aaKnown RBP5.51□□□□□ -1.53
MSI2-215ENST00000582453 CCDC27Q2M243 656 aa5.51□□□□□ -1.53
MSI2-215ENST00000582453 SPRED3Q2MJR0 410 aa5.51□□□□□ -1.53
MSI2-215ENST00000582453 FOXD4L6Q3SYB3 417 aaPredicted RBP5.51□□□□□ -1.53
MSI2-215ENST00000582453 FOXD4L3Q6VB84 417 aaPredicted RBP5.51□□□□□ -1.53
MSI2-215ENST00000582453 SLC7A3Q8WY07 619 aa5.51□□□□□ -1.53
MSI2-215ENST00000582453 KLHDC7BQ96G42 594 aa5.51□□□□□ -1.53
MSI2-215ENST00000582453 ABCB6Q9NP58 842 aa5.51□□□□□ -1.53
MSI2-215ENST00000582453 PPP4R2Q9NY27 417 aa5.51□□□□□ -1.53
MSI2-215ENST00000582453 SHROOM4Q9ULL8 1493 aa5.51□□□□□ -1.53
MSI2-215ENST00000582453 ZBTB7CA1YPR0 619 aa5.5□□□□□ -1.53
MSI2-215ENST00000582453 ANKRD33BA6NCL7 494 aa5.5□□□□□ -1.53
MSI2-215ENST00000582453 FGD1P98174 961 aa5.5□□□□□ -1.53
MSI2-215ENST00000582453 PCDH1Q08174 1060 aa5.5□□□□□ -1.53
MSI2-215ENST00000582453 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.5□□□□□ -1.53
MSI2-215ENST00000582453 DNAJC14Q6Y2X3 702 aaPredicted RBP5.5□□□□□ -1.53
MSI2-215ENST00000582453 GLIS3Q8NEA6 775 aa5.5□□□□□ -1.53
MSI2-215ENST00000582453 WFDC12Q8WWY7 111 aa5.5□□□□□ -1.53
MSI2-215ENST00000582453 ZNF576Q9H609 170 aa5.5□□□□□ -1.53
MSI2-215ENST00000582453 AKTIPQ9H8T0 292 aa5.5□□□□□ -1.53
MSI2-215ENST00000582453 KCNK4Q9NYG8 393 aa5.5□□□□□ -1.53
MSI2-215ENST00000582453 TMEM238LA0A1B0GVL6 79 aa5.49□□□□□ -1.53
MSI2-215ENST00000582453 F8W735 103 aaPredicted RBP5.49□□□□□ -1.53
MSI2-215ENST00000582453 GIPC1O14908 333 aa5.49□□□□□ -1.53
MSI2-215ENST00000582453 LDHBP07195 334 aaKnown RBP5.49□□□□□ -1.53
MSI2-215ENST00000582453 XRCC5P13010 732 aaKnown RBP5.49□□□□□ -1.53
MSI2-215ENST00000582453 ERCC3P19447 782 aa5.49□□□□□ -1.53
MSI2-215ENST00000582453 DUOXA2Q1HG44 320 aa5.49□□□□□ -1.53
MSI2-215ENST00000582453 RPS26P11Q5JNZ5 115 aaPredicted RBP5.49□□□□□ -1.53
MSI2-215ENST00000582453 PI16Q6UXB8 463 aa5.49□□□□□ -1.53
MSI2-215ENST00000582453 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.49□□□□□ -1.53
MSI2-215ENST00000582453 BCO2Q9BYV7 579 aa5.49□□□□□ -1.53
MSI2-215ENST00000582453 SRCIN1Q9C0H9 1055 aa5.49□□□□□ -1.53
MSI2-215ENST00000582453 ZFYVE1Q9HBF4 777 aa5.49□□□□□ -1.53
MSI2-215ENST00000582453 ADAM11O75078 769 aa5.48□□□□□ -1.53
MSI2-215ENST00000582453 B3GALT4O96024 378 aa5.48□□□□□ -1.53
MSI2-215ENST00000582453 NOS3P29474 1203 aa5.48□□□□□ -1.53
MSI2-215ENST00000582453 ZNF423Q2M1K9 1284 aa5.48□□□□□ -1.53
MSI2-215ENST00000582453 HGSNATQ68CP4 663 aa5.48□□□□□ -1.53
MSI2-215ENST00000582453 Q6ZS46 218 aa5.48□□□□□ -1.53
MSI2-215ENST00000582453 ACAD11Q709F0 780 aa5.48□□□□□ -1.53
MSI2-215ENST00000582453 NPAS4Q8IUM7 802 aa5.48□□□□□ -1.53
MSI2-215ENST00000582453 FOXD4L4Q8WXT5 416 aaPredicted RBP5.48□□□□□ -1.53
MSI2-215ENST00000582453 WWC3Q9ULE0 1092 aa5.48□□□□□ -1.53
MSI2-215ENST00000582453 DDX3YO15523 660 aaKnown RBP5.47□□□□□ -1.53
MSI2-215ENST00000582453 PRPF40AO75400 957 aaKnown RBP5.47□□□□□ -1.53
MSI2-215ENST00000582453 WISP1O95388 367 aa5.47□□□□□ -1.53
MSI2-215ENST00000582453 IREB2P48200 963 aaKnown RBP5.47□□□□□ -1.53
MSI2-215ENST00000582453 FCGRTP55899 365 aa5.47□□□□□ -1.53
MSI2-215ENST00000582453 NLRP12P59046 1061 aa5.47□□□□□ -1.53
MSI2-215ENST00000582453 EAPPQ56P03 285 aaPredicted RBP5.47□□□□□ -1.53
MSI2-215ENST00000582453 NXPE4Q6UWF7 544 aa5.47□□□□□ -1.53
MSI2-215ENST00000582453 KIAA1211Q6ZU35 1233 aa5.47□□□□□ -1.53
MSI2-215ENST00000582453 DDX54Q8TDD1 881 aaKnown RBP5.47□□□□□ -1.53
MSI2-215ENST00000582453 FRMD6Q96NE9 622 aa5.47□□□□□ -1.53
MSI2-215ENST00000582453 SETDB2Q96T68 719 aa5.47□□□□□ -1.53
MSI2-215ENST00000582453 SSBP4Q9BWG4 385 aaPredicted RBP5.47□□□□□ -1.53
MSI2-215ENST00000582453 TPSG1Q9NRR2 321 aa5.47□□□□□ -1.53
MSI2-215ENST00000582453 SPG7Q9UQ90 795 aa5.47□□□□□ -1.53
MSI2-215ENST00000582453 GSTM4Q03013 218 aa5.46□□□□□ -1.54
MSI2-215ENST00000582453 DOC2BQ14184 412 aa5.46□□□□□ -1.54
MSI2-215ENST00000582453 DTHD1Q6ZMT9 781 aa5.46□□□□□ -1.54
MSI2-215ENST00000582453 DZIP1LQ8IYY4 767 aaKnown RBP5.46□□□□□ -1.54
MSI2-215ENST00000582453 AGGF1Q8N302 714 aaeCLIP5.46□□□□□ -1.542e-14■■□□□ 14.4
MSI2-215ENST00000582453 UBASH3BQ8TF42 649 aa5.46□□□□□ -1.54
MSI2-215ENST00000582453 CEP41Q9BYV8 373 aa5.46□□□□□ -1.54
MSI2-215ENST00000582453 NRSN2Q9GZP1 204 aa5.46□□□□□ -1.54
MSI2-215ENST00000582453 RNF208Q9H0X6 261 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms