RNA–Protein interactions for RNA: ENST00000582104.5

SNX11-210, Transcript of sorting nexin 11, humanhuman

TSL 2 BASIC

Gene SNX11, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-210ENST00000582104 SCN9AQ15858 1988 aa16.56■□□□□ 0.24
SNX11-210ENST00000582104 IRS4O14654 1257 aaPredicted RBP16.55■□□□□ 0.24
SNX11-210ENST00000582104 GRAPQ13588 217 aa16.55■□□□□ 0.24
SNX11-210ENST00000582104 WASHC4Q2M389 1173 aa16.55■□□□□ 0.24
SNX11-210ENST00000582104 ERICH6BQ5W0A0 696 aa16.55■□□□□ 0.24
SNX11-210ENST00000582104 CEP85Q6P2H3 762 aa16.55■□□□□ 0.24
SNX11-210ENST00000582104 GRAPLQ8TC17 118 aaPredicted RBP16.55■□□□□ 0.24
SNX11-210ENST00000582104 CHMP4BQ9H444 224 aaKnown RBP16.55■□□□□ 0.24
SNX11-210ENST00000582104 ANGEL2Q5VTE6 544 aaKnown RBP16.54■□□□□ 0.24
SNX11-210ENST00000582104 PLA2G12BQ9BX93 195 aa16.54■□□□□ 0.24
SNX11-210ENST00000582104 TRIM17Q9Y577 477 aa16.54■□□□□ 0.24
SNX11-210ENST00000582104 MYH3P11055 1940 aa16.54■□□□□ 0.24
SNX11-210ENST00000582104 PNMA6EA0A0J9YXQ4 647 aa16.53■□□□□ 0.24
SNX11-210ENST00000582104 UBE2Q2LH0YL09 131 aa16.53■□□□□ 0.24
SNX11-210ENST00000582104 RIMBP2O15034 1052 aa16.53■□□□□ 0.24
SNX11-210ENST00000582104 ECE2O60344 883 aa16.53■□□□□ 0.24
SNX11-210ENST00000582104 EN2P19622 333 aaPredicted RBP16.53■□□□□ 0.24
SNX11-210ENST00000582104 AAMPQ13685 434 aa16.53■□□□□ 0.24
SNX11-210ENST00000582104 DDX46Q7L014 1031 aaKnown RBP16.53■□□□□ 0.24
SNX11-210ENST00000582104 A0A0C4DFX4 3053 aa16.53■□□□□ 0.24
SNX11-210ENST00000582104 RANBP2P49792 3224 aaKnown RBP16.53■□□□□ 0.24
SNX11-210ENST00000582104 ATP8B2P98198 1209 aa16.52■□□□□ 0.24
SNX11-210ENST00000582104 MKRN3Q13064 507 aaKnown RBP16.52■□□□□ 0.24
SNX11-210ENST00000582104 SCARF1Q14162 830 aa16.52■□□□□ 0.24
SNX11-210ENST00000582104 RABL6Q3YEC7 729 aaPredicted RBP16.52■□□□□ 0.24
SNX11-210ENST00000582104 OTOP1Q7RTM1 612 aa16.52■□□□□ 0.24
SNX11-210ENST00000582104 SLC17A8Q8NDX2 589 aa16.52■□□□□ 0.24
SNX11-210ENST00000582104 IGHDP01880 384 aa16.51■□□□□ 0.23
SNX11-210ENST00000582104 SREBF2Q12772 1141 aa16.51■□□□□ 0.23
SNX11-210ENST00000582104 DOK7Q18PE1 504 aa16.51■□□□□ 0.23
SNX11-210ENST00000582104 B4GALNT3Q6L9W6 998 aa16.51■□□□□ 0.23
SNX11-210ENST00000582104 LMBR1LQ6UX01 489 aa16.51■□□□□ 0.23
SNX11-210ENST00000582104 TMC4Q7Z404 712 aa16.51■□□□□ 0.23
SNX11-210ENST00000582104 CCDC85AQ96PX6 553 aaPredicted RBP16.51■□□□□ 0.23
SNX11-210ENST00000582104 PPP4R2Q9NY27 417 aa16.51■□□□□ 0.23
SNX11-210ENST00000582104 COL4A1P02462 1669 aa16.5■□□□□ 0.23
SNX11-210ENST00000582104 PDE8AO60658 829 aa16.5■□□□□ 0.23
SNX11-210ENST00000582104 CSF1RP07333 972 aa16.5■□□□□ 0.23
SNX11-210ENST00000582104 VIL1P09327 827 aaKnown RBP16.5■□□□□ 0.23
SNX11-210ENST00000582104 CTSWP56202 376 aa16.5■□□□□ 0.23
SNX11-210ENST00000582104 MTX1Q13505 466 aa16.5■□□□□ 0.23
SNX11-210ENST00000582104 RPAP2Q8IXW5 612 aaPredicted RBP16.5■□□□□ 0.23
SNX11-210ENST00000582104 TTLL11Q8NHH1 800 aa16.5■□□□□ 0.23
SNX11-210ENST00000582104 OTUD5Q96G74 571 aa16.5■□□□□ 0.23
SNX11-210ENST00000582104 POLLQ9UGP5 575 aa16.5■□□□□ 0.23
SNX11-210ENST00000582104 NSFL1CQ9UNZ2 370 aaKnown RBP16.5■□□□□ 0.23
SNX11-210ENST00000582104 COL6A3P12111 3177 aa16.5■□□□□ 0.23
SNX11-210ENST00000582104 PITPNM2Q9BZ72 1349 aa16.49■□□□□ 0.23
SNX11-210ENST00000582104 ZNF280AP59817 542 aaPredicted RBP16.49■□□□□ 0.23
SNX11-210ENST00000582104 POLA2Q14181 598 aa16.49■□□□□ 0.23
SNX11-210ENST00000582104 SCAF8Q9UPN6 1271 aaKnown RBP16.49■□□□□ 0.23
SNX11-210ENST00000582104 ZNF609O15014 1411 aa16.48■□□□□ 0.23
SNX11-210ENST00000582104 PSME4Q14997 1843 aa16.48■□□□□ 0.23
SNX11-210ENST00000582104 C6orf229H3BNL8 230 aa16.48■□□□□ 0.23
SNX11-210ENST00000582104 RFX5P48382 616 aaPredicted RBP16.48■□□□□ 0.23
SNX11-210ENST00000582104 SSH3Q8TE77 659 aa16.48■□□□□ 0.23
SNX11-210ENST00000582104 ARMC5Q96C12 935 aa16.48■□□□□ 0.23
SNX11-210ENST00000582104 GREM2Q9H772 168 aa16.48■□□□□ 0.23
SNX11-210ENST00000582104 HDAC5Q9UQL6 1122 aa16.48■□□□□ 0.23
SNX11-210ENST00000582104 H0YGN5 161 aa16.47■□□□□ 0.23
SNX11-210ENST00000582104 SRGAP3O43295 1099 aa16.47■□□□□ 0.23
SNX11-210ENST00000582104 GPSM2P81274 684 aa16.47■□□□□ 0.23
SNX11-210ENST00000582104 HDAC1Q13547 482 aaPredicted RBP16.47■□□□□ 0.23
SNX11-210ENST00000582104 TTLL12Q14166 644 aaPredicted RBP16.47■□□□□ 0.23
SNX11-210ENST00000582104 PRAMEF18Q5VWM3 479 aa16.47■□□□□ 0.23
SNX11-210ENST00000582104 KLHDC4Q8TBB5 520 aa16.47■□□□□ 0.23
SNX11-210ENST00000582104 PA2G4Q9UQ80 394 aaKnown RBP16.47■□□□□ 0.23
SNX11-210ENST00000582104 PTPN22Q9Y2R2 807 aa16.47■□□□□ 0.23
SNX11-210ENST00000582104 SF3B3Q15393 1217 aaKnown RBP16.46■□□□□ 0.23
SNX11-210ENST00000582104 CCDC136Q96JN2 1154 aa16.46■□□□□ 0.23
SNX11-210ENST00000582104 EYA3Q99504 573 aa16.46■□□□□ 0.23
SNX11-210ENST00000582104 SEC31BQ9NQW1 1179 aa16.46■□□□□ 0.23
SNX11-210ENST00000582104 CHMP3Q9Y3E7 222 aa16.46■□□□□ 0.23
SNX11-210ENST00000582104 ALDH1A1P00352 501 aa16.45■□□□□ 0.22
SNX11-210ENST00000582104 AGBL3Q8NEM8 1001 aa16.45■□□□□ 0.22
SNX11-210ENST00000582104 CELF1Q92879 486 aaKnown RBP16.45■□□□□ 0.22
SNX11-210ENST00000582104 ZNF594Q96JF6 807 aaPredicted RBP16.45■□□□□ 0.22
SNX11-210ENST00000582104 MYOZ2Q9NPC6 264 aa16.45■□□□□ 0.22
SNX11-210ENST00000582104 PTPN12Q05209 780 aaKnown RBP16.44■□□□□ 0.22
SNX11-210ENST00000582104 RSBN1LQ6PCB5 846 aaPredicted RBP16.44■□□□□ 0.22
SNX11-210ENST00000582104 CHRDL2Q6WN34 429 aa16.44■□□□□ 0.22
SNX11-210ENST00000582104 TBC1D16Q8TBP0 767 aa16.44■□□□□ 0.22
SNX11-210ENST00000582104 LAMB1P07942 1786 aa16.43■□□□□ 0.22
SNX11-210ENST00000582104 SPEF2Q9C093 1822 aa16.43■□□□□ 0.22
SNX11-210ENST00000582104 HSP90B1P14625 803 aaKnown RBP16.43■□□□□ 0.22
SNX11-210ENST00000582104 ITGA6P23229 1130 aa16.43■□□□□ 0.22
SNX11-210ENST00000582104 CCDC152Q4G0S7 254 aa16.43■□□□□ 0.22
SNX11-210ENST00000582104 TMEM106CQ9BVX2 250 aa16.43■□□□□ 0.22
SNX11-210ENST00000582104 RWDD1Q9H446 243 aaPredicted RBP16.43■□□□□ 0.22
SNX11-210ENST00000582104 HMMRO75330 724 aa16.42■□□□□ 0.22
SNX11-210ENST00000582104 SPRYD7Q5W111 196 aa16.42■□□□□ 0.22
SNX11-210ENST00000582104 CD99L2Q8TCZ2 262 aa16.42■□□□□ 0.22
SNX11-210ENST00000582104 ERO1AQ96HE7 468 aa16.42■□□□□ 0.22
SNX11-210ENST00000582104 ZNF333Q96JL9 665 aa16.42■□□□□ 0.22
SNX11-210ENST00000582104 GMLQ99445 158 aa16.42■□□□□ 0.22
SNX11-210ENST00000582104 PUS3Q9BZE2 481 aaKnown RBP16.42■□□□□ 0.22
SNX11-210ENST00000582104 DCTPP1Q9H773 170 aa16.42■□□□□ 0.22
SNX11-210ENST00000582104 FOXD4L1Q9NU39 408 aa16.42■□□□□ 0.22
SNX11-210ENST00000582104 RBM27Q9P2N5 1060 aaKnown RBP16.42■□□□□ 0.22
SNX11-210ENST00000582104 EXOC6BQ9Y2D4 811 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms