RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 C14orf93Q9H972 538 aaKnown RBP16.42■□□□□ 0.22
CSNK1D-217ENST00000581241 KCNK9Q9NPC2 374 aa16.42■□□□□ 0.22
CSNK1D-217ENST00000581241 MAPKBP1O60336 1514 aa16.42■□□□□ 0.22
CSNK1D-217ENST00000581241 NAPAP54920 295 aa16.42■□□□□ 0.22
CSNK1D-217ENST00000581241 ANKRD13DQ6ZTN6 518 aa16.42■□□□□ 0.22
CSNK1D-217ENST00000581241 ATP5DP30049 168 aa16.42■□□□□ 0.22
CSNK1D-217ENST00000581241 STX17P56962 302 aa16.42■□□□□ 0.22
CSNK1D-217ENST00000581241 MYL5Q02045 173 aa16.42■□□□□ 0.22
CSNK1D-217ENST00000581241 NAPGQ99747 312 aaPredicted RBP16.42■□□□□ 0.22
CSNK1D-217ENST00000581241 DCTPP1Q9H773 170 aa16.42■□□□□ 0.22
CSNK1D-217ENST00000581241 RNF113AO15541 343 aaKnown RBP16.41■□□□□ 0.22
CSNK1D-217ENST00000581241 CCDC152Q4G0S7 254 aa16.41■□□□□ 0.22
CSNK1D-217ENST00000581241 ADGRL1O94910 1474 aa16.41■□□□□ 0.22
CSNK1D-217ENST00000581241 JARID2Q92833 1246 aaPredicted RBP16.41■□□□□ 0.22
CSNK1D-217ENST00000581241 TRIM7Q9C029 511 aa16.41■□□□□ 0.22
CSNK1D-217ENST00000581241 RRAGDQ9NQL2 400 aaPredicted RBP16.41■□□□□ 0.22
CSNK1D-217ENST00000581241 LUC7L2Q9Y383 392 aaKnown RBP16.41■□□□□ 0.22
CSNK1D-217ENST00000581241 RIOK3O14730 519 aaKnown RBP16.41■□□□□ 0.22
CSNK1D-217ENST00000581241 ATP11AP98196 1134 aa16.41■□□□□ 0.22
CSNK1D-217ENST00000581241 APBB1IPQ7Z5R6 666 aaPredicted RBP16.41■□□□□ 0.22
CSNK1D-217ENST00000581241 MYRIPQ8NFW9 859 aa16.41■□□□□ 0.22
CSNK1D-217ENST00000581241 C6orf50Q9HD87 102 aa16.41■□□□□ 0.22
CSNK1D-217ENST00000581241 SWAP70Q9UH65 585 aa16.41■□□□□ 0.22
CSNK1D-217ENST00000581241 POTEDQ86YR6 584 aa16.41■□□□□ 0.22
CSNK1D-217ENST00000581241 PLEKHM2Q8IWE5 1019 aa16.41■□□□□ 0.22
CSNK1D-217ENST00000581241 CTNND2Q9UQB3 1225 aa16.41■□□□□ 0.22
CSNK1D-217ENST00000581241 IGSF3O75054 1194 aa16.41■□□□□ 0.22
CSNK1D-217ENST00000581241 CALML3P27482 149 aa16.41■□□□□ 0.22
CSNK1D-217ENST00000581241 GABPB1Q06547 395 aaPredicted RBP16.41■□□□□ 0.22
CSNK1D-217ENST00000581241 PPP1R7Q15435 360 aa16.41■□□□□ 0.22
CSNK1D-217ENST00000581241 U2AF2P26368 475 aaKnown RBP eCLIP16.4■□□□□ 0.229e-9■■■□□ 19.2
CSNK1D-217ENST00000581241 GRM8O00222 908 aa16.4■□□□□ 0.22
CSNK1D-217ENST00000581241 EEF2P13639 858 aaKnown RBP16.4■□□□□ 0.22
CSNK1D-217ENST00000581241 ATP2A2P16615 1042 aaKnown RBP16.4■□□□□ 0.22
CSNK1D-217ENST00000581241 GNAT2P19087 354 aa16.4■□□□□ 0.22
CSNK1D-217ENST00000581241 CCDC122Q5T0U0 273 aa16.4■□□□□ 0.22
CSNK1D-217ENST00000581241 GJC1P36383 396 aa16.4■□□□□ 0.22
CSNK1D-217ENST00000581241 CCDC26Q8TAB7 109 aa16.4■□□□□ 0.22
CSNK1D-217ENST00000581241 WDR66Q8TBY9 1149 aa16.4■□□□□ 0.22
CSNK1D-217ENST00000581241 SSX2IPQ9Y2D8 614 aa16.4■□□□□ 0.22
CSNK1D-217ENST00000581241 NUP160Q12769 1436 aa16.4■□□□□ 0.22
CSNK1D-217ENST00000581241 ABCA10Q8WWZ4 1543 aa16.4■□□□□ 0.22
CSNK1D-217ENST00000581241 IL15P40933 162 aaPredicted RBP16.4■□□□□ 0.22
CSNK1D-217ENST00000581241 JAKMIP2Q96AA8 810 aa16.4■□□□□ 0.22
CSNK1D-217ENST00000581241 POLR3AO14802 1390 aaPredicted RBP16.4■□□□□ 0.22
CSNK1D-217ENST00000581241 CIB2O75838 187 aa16.4■□□□□ 0.22
CSNK1D-217ENST00000581241 CHMLP26374 656 aa16.4■□□□□ 0.22
CSNK1D-217ENST00000581241 TERF1P54274 439 aa16.4■□□□□ 0.22
CSNK1D-217ENST00000581241 FAM160A1Q05DH4 1040 aa16.4■□□□□ 0.22
CSNK1D-217ENST00000581241 C8orf58Q8NAV2 365 aa16.4■□□□□ 0.22
CSNK1D-217ENST00000581241 STIM2Q9P246 746 aa16.4■□□□□ 0.22
CSNK1D-217ENST00000581241 SEL1L2Q5TEA6 688 aa16.39■□□□□ 0.21
CSNK1D-217ENST00000581241 INTS8Q75QN2 995 aaKnown RBP16.39■□□□□ 0.21
CSNK1D-217ENST00000581241 CYP26C1Q6V0L0 522 aa16.39■□□□□ 0.21
CSNK1D-217ENST00000581241 IFT74Q96LB3 600 aa16.39■□□□□ 0.21
CSNK1D-217ENST00000581241 TTF2Q9UNY4 1162 aaKnown RBP16.39■□□□□ 0.21
CSNK1D-217ENST00000581241 ALDH3A1P30838 453 aa16.39■□□□□ 0.21
CSNK1D-217ENST00000581241 NAA25Q14CX7 972 aa16.39■□□□□ 0.21
CSNK1D-217ENST00000581241 ATP2B3Q16720 1220 aa16.39■□□□□ 0.21
CSNK1D-217ENST00000581241 TRAF1Q13077 416 aa16.39■□□□□ 0.21
CSNK1D-217ENST00000581241 PPFIBP2Q8ND30 876 aa16.39■□□□□ 0.21
CSNK1D-217ENST00000581241 MAGEB6P1A0A0J9YX57 407 aa16.38■□□□□ 0.21
CSNK1D-217ENST00000581241 FAM13AO94988 1023 aa16.38■□□□□ 0.21
CSNK1D-217ENST00000581241 MAP7D1Q3KQU3 841 aa16.38■□□□□ 0.21
CSNK1D-217ENST00000581241 DHX32Q7L7V1 743 aaKnown RBP16.38■□□□□ 0.21
CSNK1D-217ENST00000581241 TRMT1LQ7Z2T5 733 aaKnown RBP16.38■□□□□ 0.21
CSNK1D-217ENST00000581241 RAB3IL1Q8TBN0 382 aa16.38■□□□□ 0.21
CSNK1D-217ENST00000581241 CLSTN2Q9H4D0 955 aa16.38■□□□□ 0.21
CSNK1D-217ENST00000581241 MTUS1Q9ULD2 1270 aa16.38■□□□□ 0.21
CSNK1D-217ENST00000581241 MCM7P33993 719 aa16.38■□□□□ 0.21
CSNK1D-217ENST00000581241 RRP36Q96EU6 259 aaKnown RBP16.38■□□□□ 0.21
CSNK1D-217ENST00000581241 PPP1R9BQ96SB3 815 aa16.38■□□□□ 0.21
CSNK1D-217ENST00000581241 RBM28Q9NW13 759 aaKnown RBP16.38■□□□□ 0.21
CSNK1D-217ENST00000581241 IMPACTQ9P2X3 320 aa16.38■□□□□ 0.21
CSNK1D-217ENST00000581241 GBP1P32455 592 aa16.38■□□□□ 0.21
CSNK1D-217ENST00000581241 KRT79Q5XKE5 535 aa16.38■□□□□ 0.21
CSNK1D-217ENST00000581241 KSR2Q6VAB6 950 aa16.38■□□□□ 0.21
CSNK1D-217ENST00000581241 STX8Q9UNK0 236 aa16.38■□□□□ 0.21
CSNK1D-217ENST00000581241 A6NNZ2 444 aa16.38■□□□□ 0.21
CSNK1D-217ENST00000581241 SEC24BO95487 1268 aa16.38■□□□□ 0.21
CSNK1D-217ENST00000581241 ZNF75DP51815 510 aa16.38■□□□□ 0.21
CSNK1D-217ENST00000581241 TUBB8Q3ZCM7 444 aa16.38■□□□□ 0.21
CSNK1D-217ENST00000581241 FMNL3Q8IVF7 1028 aa16.38■□□□□ 0.21
CSNK1D-217ENST00000581241 MPHOSPH6Q99547 160 aaKnown RBP16.37■□□□□ 0.21
CSNK1D-217ENST00000581241 DCAF8L1A6NGE4 600 aa16.37■□□□□ 0.21
CSNK1D-217ENST00000581241 PSMD1Q99460 953 aa16.37■□□□□ 0.21
CSNK1D-217ENST00000581241 STMN2Q93045 179 aa16.37■□□□□ 0.21
CSNK1D-217ENST00000581241 ITSN2Q9NZM3 1697 aa16.37■□□□□ 0.21
CSNK1D-217ENST00000581241 TLDC2A0PJX2 215 aa16.37■□□□□ 0.21
CSNK1D-217ENST00000581241 PPP1R2P41236 205 aa16.37■□□□□ 0.21
CSNK1D-217ENST00000581241 CEP128Q6ZU80 1094 aa16.37■□□□□ 0.21
CSNK1D-217ENST00000581241 CCDC25Q86WR0 208 aa16.37■□□□□ 0.21
CSNK1D-217ENST00000581241 SEPT6Q14141 434 aa16.37■□□□□ 0.21
CSNK1D-217ENST00000581241 SLC9C2Q5TAH2 1124 aa16.37■□□□□ 0.21
CSNK1D-217ENST00000581241 ZBTB9Q96C00 473 aa16.37■□□□□ 0.21
CSNK1D-217ENST00000581241 ZBTB40Q9NUA8 1239 aa16.37■□□□□ 0.21
CSNK1D-217ENST00000581241 C6orf229H3BNL8 230 aa16.36■□□□□ 0.21
CSNK1D-217ENST00000581241 ZNF445P59923 1031 aa16.36■□□□□ 0.21
CSNK1D-217ENST00000581241 CALCOCO2Q13137 446 aa16.36■□□□□ 0.21
CSNK1D-217ENST00000581241 XAGE3Q8WTP9 111 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 126.8 ms