RNA–Protein interactions for RNA: ENST00000580565.1

CSNK1D-214, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-214ENST00000580565 MTMR14Q8NCE2 650 aa22.08■■□□□ 1.13
CSNK1D-214ENST00000580565 MCOLN1Q9GZU1 580 aa22.08■■□□□ 1.13
CSNK1D-214ENST00000580565 PTPRCP08575 1304 aa22.07■■□□□ 1.12
CSNK1D-214ENST00000580565 SLFN5Q08AF3 891 aa22.07■■□□□ 1.12
CSNK1D-214ENST00000580565 SSH1Q8WYL5 1049 aa22.07■■□□□ 1.12
CSNK1D-214ENST00000580565 PUS3Q9BZE2 481 aaKnown RBP22.07■■□□□ 1.12
CSNK1D-214ENST00000580565 ZNF646O15015 1829 aaPredicted RBP22.07■■□□□ 1.12
CSNK1D-214ENST00000580565 PAPPA2Q9BXP8 1791 aa22.07■■□□□ 1.12
CSNK1D-214ENST00000580565 CCDC85CA6NKD9 419 aa22.06■■□□□ 1.12
CSNK1D-214ENST00000580565 F8W031 263 aaPredicted RBP22.06■■□□□ 1.12
CSNK1D-214ENST00000580565 DGKZQ13574 1117 aa22.06■■□□□ 1.12
CSNK1D-214ENST00000580565 UBE4AQ14139 1066 aa22.06■■□□□ 1.12
CSNK1D-214ENST00000580565 BICC1Q9H694 974 aaKnown RBP22.06■■□□□ 1.12
CSNK1D-214ENST00000580565 JAG2Q9Y219 1238 aa22.06■■□□□ 1.12
CSNK1D-214ENST00000580565 RABL6Q3YEC7 729 aaPredicted RBP22.05■■□□□ 1.12
CSNK1D-214ENST00000580565 DEFB129Q9H1M3 183 aa22.05■■□□□ 1.12
CSNK1D-214ENST00000580565 RIPOR2Q9Y4F9 1068 aa22.05■■□□□ 1.12
CSNK1D-214ENST00000580565 HIBADHP31937 336 aaKnown RBP22.04■■□□□ 1.12
CSNK1D-214ENST00000580565 CFAP100Q494V2 611 aa22.04■■□□□ 1.12
CSNK1D-214ENST00000580565 ARMC9Q7Z3E5 817 aa22.04■■□□□ 1.12
CSNK1D-214ENST00000580565 ANKRD44Q8N8A2 993 aa22.04■■□□□ 1.12
CSNK1D-214ENST00000580565 TDRD7Q8NHU6 1098 aaKnown RBP22.04■■□□□ 1.12
CSNK1D-214ENST00000580565 PCDHAC2Q9Y5I4 1007 aa22.04■■□□□ 1.12
CSNK1D-214ENST00000580565 FAM205AQ6ZU69 1335 aa22.04■■□□□ 1.12
CSNK1D-214ENST00000580565 SPDYE2BA6NHP3 402 aa22.03■■□□□ 1.12
CSNK1D-214ENST00000580565 MYO1BO43795 1136 aa22.03■■□□□ 1.12
CSNK1D-214ENST00000580565 SPDYE6P0CI01 402 aa22.03■■□□□ 1.12
CSNK1D-214ENST00000580565 GYG1P46976 350 aa22.03■■□□□ 1.12
CSNK1D-214ENST00000580565 PTPN12Q05209 780 aaKnown RBP22.03■■□□□ 1.12
CSNK1D-214ENST00000580565 PRKG1Q13976 671 aa22.03■■□□□ 1.12
CSNK1D-214ENST00000580565 FAM84BQ96KN1 310 aaPredicted RBP22.03■■□□□ 1.12
CSNK1D-214ENST00000580565 PRMT6Q96LA8 375 aaPredicted RBP22.03■■□□□ 1.12
CSNK1D-214ENST00000580565 MROH5Q6ZUA9 1318 aa22.03■■□□□ 1.12
CSNK1D-214ENST00000580565 CDCA7LQ96GN5 454 aa22.02■■□□□ 1.12
CSNK1D-214ENST00000580565 LDLRAD1Q5T700 205 aa22.01■■□□□ 1.11
CSNK1D-214ENST00000580565 USP44Q9H0E7 712 aa22.01■■□□□ 1.11
CSNK1D-214ENST00000580565 PPP2R3BQ9Y5P8 575 aa22.01■■□□□ 1.11
CSNK1D-214ENST00000580565 CLRN2A0PK11 232 aa22■■□□□ 1.11
CSNK1D-214ENST00000580565 RBM5P52756 815 aaKnown RBP eCLIP22■■□□□ 1.111e-8■■□□□ 12.4
CSNK1D-214ENST00000580565 ALDH1L2Q3SY69 923 aa22■■□□□ 1.11
CSNK1D-214ENST00000580565 LRRC24Q50LG9 513 aa22■■□□□ 1.11
CSNK1D-214ENST00000580565 MFSD14BQ5SR56 506 aa22■■□□□ 1.11
CSNK1D-214ENST00000580565 ANGEL1Q9UNK9 670 aaKnown RBP22■■□□□ 1.11
CSNK1D-214ENST00000580565 COL1A1P02452 1464 aaPredicted RBP22■■□□□ 1.11
CSNK1D-214ENST00000580565 TM4SF4P48230 202 aa21.99■■□□□ 1.11
CSNK1D-214ENST00000580565 MKRN3Q13064 507 aaKnown RBP21.99■■□□□ 1.11
CSNK1D-214ENST00000580565 METTL24Q5JXM2 366 aa21.99■■□□□ 1.11
CSNK1D-214ENST00000580565 FBXO33Q7Z6M2 555 aa21.99■■□□□ 1.11
CSNK1D-214ENST00000580565 TRMT2AQ8IZ69 625 aaKnown RBP21.98■■□□□ 1.11
CSNK1D-214ENST00000580565 VEZTQ9HBM0 779 aa21.98■■□□□ 1.11
CSNK1D-214ENST00000580565 TTF2Q9UNY4 1162 aaKnown RBP21.98■■□□□ 1.11
CSNK1D-214ENST00000580565 FZD1Q9UP38 647 aa21.98■■□□□ 1.11
CSNK1D-214ENST00000580565 AOX1Q06278 1338 aa21.98■■□□□ 1.11
CSNK1D-214ENST00000580565 PDE8BO95263 885 aa21.97■■□□□ 1.11
CSNK1D-214ENST00000580565 SUPT20HL1Q3ZLR7 823 aa21.97■■□□□ 1.11
CSNK1D-214ENST00000580565 VPS37DQ86XT2 251 aa21.97■■□□□ 1.11
CSNK1D-214ENST00000580565 KLHDC4Q8TBB5 520 aa21.97■■□□□ 1.11
CSNK1D-214ENST00000580565 SMC4Q9NTJ3 1288 aa21.97■■□□□ 1.11
CSNK1D-214ENST00000580565 SERPINA10Q9UK55 444 aa21.97■■□□□ 1.11
CSNK1D-214ENST00000580565 CASP8AP2Q9UKL3 1982 aa21.97■■□□□ 1.11
CSNK1D-214ENST00000580565 A0A1B0GUL6 1792 aa21.97■■□□□ 1.11
CSNK1D-214ENST00000580565 PPP1R12BO60237 982 aaPredicted RBP21.96■■□□□ 1.11
CSNK1D-214ENST00000580565 TBC1D8O95759 1140 aa21.96■■□□□ 1.11
CSNK1D-214ENST00000580565 RGS19P49795 217 aa21.96■■□□□ 1.11
CSNK1D-214ENST00000580565 SREBF2Q12772 1141 aa21.96■■□□□ 1.11
CSNK1D-214ENST00000580565 MAP3K11Q16584 847 aa21.96■■□□□ 1.11
CSNK1D-214ENST00000580565 CAVIN4Q5BKX8 364 aa21.96■■□□□ 1.11
CSNK1D-214ENST00000580565 SPRYD7Q5W111 196 aa21.96■■□□□ 1.11
CSNK1D-214ENST00000580565 VGLL2Q8N8G2 317 aa21.96■■□□□ 1.11
CSNK1D-214ENST00000580565 SLC10A4Q96EP9 437 aa21.96■■□□□ 1.11
CSNK1D-214ENST00000580565 RASA3Q14644 834 aa21.95■■□□□ 1.1
CSNK1D-214ENST00000580565 NBPF12Q5TAG4 269 aaPredicted RBP21.95■■□□□ 1.1
CSNK1D-214ENST00000580565 IQSEC3Q9UPP2 1182 aaPredicted RBP21.95■■□□□ 1.1
CSNK1D-214ENST00000580565 SPDYE2Q495Y8 402 aa21.94■■□□□ 1.1
CSNK1D-214ENST00000580565 CTU1Q7Z7A3 348 aaKnown RBP21.94■■□□□ 1.1
CSNK1D-214ENST00000580565 ZNF70Q9UC06 446 aaPredicted RBP21.94■■□□□ 1.1
CSNK1D-214ENST00000580565 SSC5DA1L4H1 1573 aa21.93■■□□□ 1.1
CSNK1D-214ENST00000580565 UNCXA6NJT0 531 aa21.93■■□□□ 1.1
CSNK1D-214ENST00000580565 FRAT2O75474 233 aaPredicted RBP21.93■■□□□ 1.1
CSNK1D-214ENST00000580565 CT47B1P0C2W7 299 aaPredicted RBP21.93■■□□□ 1.1
CSNK1D-214ENST00000580565 CHAF1AQ13111 956 aaPredicted RBP21.93■■□□□ 1.1
CSNK1D-214ENST00000580565 DZIP1LQ8IYY4 767 aaKnown RBP21.93■■□□□ 1.1
CSNK1D-214ENST00000580565 TDRD3Q9H7E2 651 aaKnown RBP21.93■■□□□ 1.1
CSNK1D-214ENST00000580565 CRKP46108 304 aa21.92■■□□□ 1.1
CSNK1D-214ENST00000580565 RFX5P48382 616 aaPredicted RBP21.92■■□□□ 1.1
CSNK1D-214ENST00000580565 BCAMP50895 628 aa21.92■■□□□ 1.1
CSNK1D-214ENST00000580565 TNFAIP1Q13829 316 aa21.92■■□□□ 1.1
CSNK1D-214ENST00000580565 GRIK5Q16478 980 aa21.92■■□□□ 1.1
CSNK1D-214ENST00000580565 TBC1D22AQ8WUA7 517 aa21.92■■□□□ 1.1
CSNK1D-214ENST00000580565 ZNF296Q8WUU4 475 aaPredicted RBP21.92■■□□□ 1.1
CSNK1D-214ENST00000580565 CLMNQ96JQ2 1002 aa21.92■■□□□ 1.1
CSNK1D-214ENST00000580565 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.92■■□□□ 1.1
CSNK1D-214ENST00000580565 CCER2I3L3R5 266 aa21.91■■□□□ 1.1
CSNK1D-214ENST00000580565 EYA2O00167 538 aa21.91■■□□□ 1.1
CSNK1D-214ENST00000580565 USP2O75604 605 aaPredicted RBP21.91■■□□□ 1.1
CSNK1D-214ENST00000580565 MLLT1Q03111 559 aaPredicted RBP21.91■■□□□ 1.1
CSNK1D-214ENST00000580565 PUM3Q15397 648 aaKnown RBP21.91■■□□□ 1.1
CSNK1D-214ENST00000580565 NOB1Q9ULX3 412 aaKnown RBP21.91■■□□□ 1.1
CSNK1D-214ENST00000580565 MANSC4A6NHS7 340 aaPredicted RBP21.9■■□□□ 1.1
CSNK1D-214ENST00000580565 IFIT1P09914 478 aaKnown RBP21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms