RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 GOLGA8BA8MQT2 603 aa12.3□□□□□ -0.44
TOP3A-209ENST00000580095 GPAA1O43292 621 aa12.3□□□□□ -0.44
TOP3A-209ENST00000580095 CIAO1O76071 339 aa12.3□□□□□ -0.44
TOP3A-209ENST00000580095 AIFM3Q96NN9 605 aa12.3□□□□□ -0.44
TOP3A-209ENST00000580095 CFAP45Q9UL16 551 aa12.3□□□□□ -0.44
TOP3A-209ENST00000580095 ZBTB1Q9Y2K1 713 aa12.3□□□□□ -0.44
TOP3A-209ENST00000580095 SLC9C2Q5TAH2 1124 aa12.29□□□□□ -0.44
TOP3A-209ENST00000580095 SENP2Q9HC62 589 aa12.29□□□□□ -0.44
TOP3A-209ENST00000580095 TRMT112Q9UI30 125 aaKnown RBP12.29□□□□□ -0.44
TOP3A-209ENST00000580095 A0A1B0GVL5 298 aa12.29□□□□□ -0.44
TOP3A-209ENST00000580095 ZBTB38Q8NAP3 1195 aaPredicted RBP12.29□□□□□ -0.44
TOP3A-209ENST00000580095 TTLL11Q8NHH1 800 aa12.29□□□□□ -0.44
TOP3A-209ENST00000580095 ZSCAN16Q9H4T2 348 aaPredicted RBP12.29□□□□□ -0.44
TOP3A-209ENST00000580095 RFX7Q2KHR2 1363 aa12.29□□□□□ -0.44
TOP3A-209ENST00000580095 ANTXR2P58335 489 aa12.28□□□□□ -0.44
TOP3A-209ENST00000580095 ARID5BQ14865 1188 aa12.28□□□□□ -0.44
TOP3A-209ENST00000580095 IMMTQ16891 758 aaKnown RBP12.28□□□□□ -0.44
TOP3A-209ENST00000580095 NLRP10Q86W26 655 aa12.28□□□□□ -0.44
TOP3A-209ENST00000580095 FSIP1Q8NA03 581 aa12.28□□□□□ -0.44
TOP3A-209ENST00000580095 PIH1D3Q9NQM4 214 aaKnown RBP12.28□□□□□ -0.44
TOP3A-209ENST00000580095 CLIC4Q9Y696 253 aa12.28□□□□□ -0.44
TOP3A-209ENST00000580095 CARMIL3Q8ND23 1372 aa12.28□□□□□ -0.44
TOP3A-209ENST00000580095 SOS2Q07890 1332 aaPredicted RBP12.28□□□□□ -0.44
TOP3A-209ENST00000580095 UBE2Q2LH0YL09 131 aa12.28□□□□□ -0.44
TOP3A-209ENST00000580095 IRS4O14654 1257 aaPredicted RBP12.28□□□□□ -0.44
TOP3A-209ENST00000580095 STARD3NLO95772 234 aa12.28□□□□□ -0.44
TOP3A-209ENST00000580095 PCCAP05165 728 aaPredicted RBP12.28□□□□□ -0.44
TOP3A-209ENST00000580095 PHKA1P46020 1223 aa12.28□□□□□ -0.44
TOP3A-209ENST00000580095 MYL10Q9BUA6 226 aa12.28□□□□□ -0.44
TOP3A-209ENST00000580095 ZHX1Q9UKY1 873 aaPredicted RBP12.28□□□□□ -0.44
TOP3A-209ENST00000580095 AKAP2Q9Y2D5 859 aa12.28□□□□□ -0.44
TOP3A-209ENST00000580095 NAA16Q6N069 864 aaPredicted RBP12.27□□□□□ -0.44
TOP3A-209ENST00000580095 LLPHQ9BRT6 129 aaKnown RBP12.27□□□□□ -0.44
TOP3A-209ENST00000580095 AGXT2Q9BYV1 514 aa12.27□□□□□ -0.44
TOP3A-209ENST00000580095 RIPOR2Q9Y4F9 1068 aa12.27□□□□□ -0.44
TOP3A-209ENST00000580095 PKD1L3Q7Z443 1732 aa12.27□□□□□ -0.44
TOP3A-209ENST00000580095 ZNF213O14771 459 aa12.27□□□□□ -0.45
TOP3A-209ENST00000580095 HMGN5P82970 282 aaKnown RBP12.27□□□□□ -0.45
TOP3A-209ENST00000580095 SNW1Q13573 536 aaKnown RBP12.27□□□□□ -0.45
TOP3A-209ENST00000580095 RALYLQ86SE5 291 aaKnown RBP12.27□□□□□ -0.45
TOP3A-209ENST00000580095 KIAA1524Q8TCG1 905 aa12.27□□□□□ -0.45
TOP3A-209ENST00000580095 NBPF3Q9H094 633 aa12.27□□□□□ -0.45
TOP3A-209ENST00000580095 ORC3Q9UBD5 711 aaPredicted RBP12.27□□□□□ -0.45
TOP3A-209ENST00000580095 HPS5Q9UPZ3 1129 aa12.27□□□□□ -0.45
TOP3A-209ENST00000580095 CPLX1O14810 134 aa12.27□□□□□ -0.45
TOP3A-209ENST00000580095 ISM2Q6H9L7 571 aa12.27□□□□□ -0.45
TOP3A-209ENST00000580095 GIGYF2Q6Y7W6 1299 aaKnown RBP12.27□□□□□ -0.45
TOP3A-209ENST00000580095 CCDC73Q6ZRK6 1079 aa12.27□□□□□ -0.45
TOP3A-209ENST00000580095 TBC1D10CQ8IV04 446 aa12.27□□□□□ -0.45
TOP3A-209ENST00000580095 APPBP2Q92624 585 aa12.27□□□□□ -0.45
TOP3A-209ENST00000580095 RCOR1Q9UKL0 485 aa12.27□□□□□ -0.45
TOP3A-209ENST00000580095 WWC3Q9ULE0 1092 aa12.27□□□□□ -0.45
TOP3A-209ENST00000580095 PCDHA7Q9UN72 937 aa12.27□□□□□ -0.45
TOP3A-209ENST00000580095 MAP3K15Q6ZN16 1313 aa12.26□□□□□ -0.45
TOP3A-209ENST00000580095 SALL1Q9NSC2 1324 aa12.26□□□□□ -0.45
TOP3A-209ENST00000580095 BIN1O00499 593 aa12.26□□□□□ -0.45
TOP3A-209ENST00000580095 CSF1RP07333 972 aa12.26□□□□□ -0.45
TOP3A-209ENST00000580095 CCDC144BQ3MJ40 725 aa12.26□□□□□ -0.45
TOP3A-209ENST00000580095 ZNF274Q96GC6 653 aaPredicted RBP12.26□□□□□ -0.45
TOP3A-209ENST00000580095 C8orf76Q96K31 380 aa12.26□□□□□ -0.45
TOP3A-209ENST00000580095 KIF28PB7ZC32 967 aa12.26□□□□□ -0.45
TOP3A-209ENST00000580095 KINO60870 393 aaKnown RBP12.26□□□□□ -0.45
TOP3A-209ENST00000580095 ZNF75DP51815 510 aa12.26□□□□□ -0.45
TOP3A-209ENST00000580095 CTSWP56202 376 aa12.26□□□□□ -0.45
TOP3A-209ENST00000580095 RBM43Q6ZSC3 357 aaKnown RBP12.26□□□□□ -0.45
TOP3A-209ENST00000580095 MB21D2Q8IYB1 491 aaPredicted RBP12.26□□□□□ -0.45
TOP3A-209ENST00000580095 PHKBQ93100 1093 aa12.26□□□□□ -0.45
TOP3A-209ENST00000580095 BRD2P25440 801 aaKnown RBP12.25□□□□□ -0.45
TOP3A-209ENST00000580095 SF3A1Q15459 793 aaKnown RBP12.25□□□□□ -0.45
TOP3A-209ENST00000580095 CYB5R4Q7L1T6 521 aa12.25□□□□□ -0.45
TOP3A-209ENST00000580095 ZFP91Q96JP5 570 aaPredicted RBP12.25□□□□□ -0.45
TOP3A-209ENST00000580095 IQSEC3Q9UPP2 1182 aaPredicted RBP12.25□□□□□ -0.45
TOP3A-209ENST00000580095 TJP1Q07157 1748 aa12.25□□□□□ -0.45
TOP3A-209ENST00000580095 ANKRD18BA2A2Z9 1011 aa12.25□□□□□ -0.45
TOP3A-209ENST00000580095 B4E1Z4 1266 aa12.25□□□□□ -0.45
TOP3A-209ENST00000580095 MARCKSP29966 332 aaPredicted RBP12.25□□□□□ -0.45
TOP3A-209ENST00000580095 NDUFA8P51970 172 aa12.25□□□□□ -0.45
TOP3A-209ENST00000580095 MICU3Q86XE3 530 aa12.25□□□□□ -0.45
TOP3A-209ENST00000580095 SDF4Q9BRK5 362 aa12.25□□□□□ -0.45
TOP3A-209ENST00000580095 CLIP2Q9UDT6 1046 aa12.25□□□□□ -0.45
TOP3A-209ENST00000580095 CTNNA3Q9UI47 895 aa12.25□□□□□ -0.45
TOP3A-209ENST00000580095 ZNF532Q9HCE3 1301 aa12.25□□□□□ -0.45
TOP3A-209ENST00000580095 CYP19A1P11511 503 aaPredicted RBP12.24□□□□□ -0.45
TOP3A-209ENST00000580095 CCDC102BQ68D86 513 aa12.24□□□□□ -0.45
TOP3A-209ENST00000580095 ACSBG1Q96GR2 724 aa12.24□□□□□ -0.45
TOP3A-209ENST00000580095 C16orf45Q96MC5 204 aaPredicted RBP12.24□□□□□ -0.45
TOP3A-209ENST00000580095 SEC31BQ9NQW1 1179 aa12.24□□□□□ -0.45
TOP3A-209ENST00000580095 TMEM51Q9NW97 253 aa12.24□□□□□ -0.45
TOP3A-209ENST00000580095 RIC1Q4ADV7 1423 aa12.24□□□□□ -0.45
TOP3A-209ENST00000580095 TNS2Q63HR2 1409 aa12.24□□□□□ -0.45
TOP3A-209ENST00000580095 STK38Q15208 465 aa12.24□□□□□ -0.45
TOP3A-209ENST00000580095 CCDC82Q8N4S0 544 aa12.24□□□□□ -0.45
TOP3A-209ENST00000580095 NCOA7Q8NI08 942 aa12.24□□□□□ -0.45
TOP3A-209ENST00000580095 ZNF396Q96N95 335 aaPredicted RBP12.24□□□□□ -0.45
TOP3A-209ENST00000580095 KIF3AQ9Y496 699 aa12.24□□□□□ -0.45
TOP3A-209ENST00000580095 UBN2Q6ZU65 1347 aa12.24□□□□□ -0.45
TOP3A-209ENST00000580095 WTIPA6NIX2 430 aaPredicted RBP12.24□□□□□ -0.45
TOP3A-209ENST00000580095 GOLGA6L6A8MZA4 724 aa12.24□□□□□ -0.45
TOP3A-209ENST00000580095 GOLGA6L19H0YKK7 550 aa12.24□□□□□ -0.45
TOP3A-209ENST00000580095 TRIM28Q13263 835 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms