RNA–Protein interactions for RNA: ENST00000579727.5

RARA-209, Transcript of retinoic acid receptor alpha, humanhuman

TSL 4

Gene RARA, Length 564 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-209ENST00000579727 SSH3Q8TE77 659 aa20.27■□□□□ 0.84
RARA-209ENST00000579727 DPF2Q92785 391 aa20.27■□□□□ 0.84
RARA-209ENST00000579727 HIRAP54198 1017 aaPredicted RBP20.26■□□□□ 0.83
RARA-209ENST00000579727 VPS37DQ86XT2 251 aa20.26■□□□□ 0.83
RARA-209ENST00000579727 AGBL3Q8NEM8 1001 aa20.26■□□□□ 0.83
RARA-209ENST00000579727 LPIN2Q92539 896 aa20.26■□□□□ 0.83
RARA-209ENST00000579727 GMLQ99445 158 aa20.26■□□□□ 0.83
RARA-209ENST00000579727 ZNF609O15014 1411 aa20.26■□□□□ 0.83
RARA-209ENST00000579727 G3BP1Q13283 466 aaKnown RBP eCLIP20.25■□□□□ 0.83
RARA-209ENST00000579727 CAVIN4Q5BKX8 364 aa20.25■□□□□ 0.83
RARA-209ENST00000579727 ZBTB40Q9NUA8 1239 aa20.25■□□□□ 0.83
RARA-209ENST00000579727 SURF6O75683 361 aaKnown RBP20.24■□□□□ 0.83
RARA-209ENST00000579727 ADORA1P30542 326 aa20.24■□□□□ 0.83
RARA-209ENST00000579727 CHAF1AQ13111 956 aaPredicted RBP20.24■□□□□ 0.83
RARA-209ENST00000579727 OS9Q13438 667 aaPredicted RBP20.24■□□□□ 0.83
RARA-209ENST00000579727 FBXO33Q7Z6M2 555 aa20.24■□□□□ 0.83
RARA-209ENST00000579727 KIAA0825Q8IV33 1275 aa20.24■□□□□ 0.83
RARA-209ENST00000579727 CERS5Q8N5B7 392 aa20.24■□□□□ 0.83
RARA-209ENST00000579727 TDRD7Q8NHU6 1098 aaKnown RBP20.24■□□□□ 0.83
RARA-209ENST00000579727 F8W031 263 aaPredicted RBP20.23■□□□□ 0.83
RARA-209ENST00000579727 FRAT2O75474 233 aaPredicted RBP20.23■□□□□ 0.83
RARA-209ENST00000579727 SASH1O94885 1247 aa20.23■□□□□ 0.83
RARA-209ENST00000579727 USP17L8P0C7I0 530 aa20.23■□□□□ 0.83
RARA-209ENST00000579727 TIMM10P62072 90 aa20.23■□□□□ 0.83
RARA-209ENST00000579727 KIF4BQ2VIQ3 1234 aa20.23■□□□□ 0.83
RARA-209ENST00000579727 MYO3BQ8WXR4 1341 aa20.23■□□□□ 0.83
RARA-209ENST00000579727 CTCFP49711 727 aaPredicted RBP20.22■□□□□ 0.83
RARA-209ENST00000579727 COL1A1P02452 1464 aaPredicted RBP20.22■□□□□ 0.83
RARA-209ENST00000579727 ASTN2O75129 1339 aaPredicted RBP20.22■□□□□ 0.83
RARA-209ENST00000579727 A0A1B0GUL7 405 aa20.21■□□□□ 0.83
RARA-209ENST00000579727 ZNF280AP59817 542 aaPredicted RBP20.21■□□□□ 0.83
RARA-209ENST00000579727 FMR1Q06787 632 aaKnown RBP eCLIP20.21■□□□□ 0.83
RARA-209ENST00000579727 CNTROBQ8N137 903 aa20.21■□□□□ 0.83
RARA-209ENST00000579727 MYOZ2Q9NPC6 264 aa20.21■□□□□ 0.83
RARA-209ENST00000579727 EXOC6BQ9Y2D4 811 aa20.21■□□□□ 0.83
RARA-209ENST00000579727 FAM205AQ6ZU69 1335 aa20.21■□□□□ 0.83
RARA-209ENST00000579727 PASKQ96RG2 1323 aa20.21■□□□□ 0.83
RARA-209ENST00000579727 PHKA1P46020 1223 aa20.2■□□□□ 0.82
RARA-209ENST00000579727 VEGFBP49765 207 aa20.2■□□□□ 0.82
RARA-209ENST00000579727 LBX1P52954 281 aa20.2■□□□□ 0.82
RARA-209ENST00000579727 SIRT2Q8IXJ6 389 aa20.2■□□□□ 0.82
RARA-209ENST00000579727 NEUROD6Q96NK8 337 aa20.2■□□□□ 0.82
RARA-209ENST00000579727 TRAF5O00463 557 aa20.19■□□□□ 0.82
RARA-209ENST00000579727 ITGBL1O95965 494 aaPredicted RBP20.19■□□□□ 0.82
RARA-209ENST00000579727 MFSD14BQ5SR56 506 aa20.19■□□□□ 0.82
RARA-209ENST00000579727 ABHD8Q96I13 439 aa20.19■□□□□ 0.82
RARA-209ENST00000579727 CRBNQ96SW2 442 aa20.19■□□□□ 0.82
RARA-209ENST00000579727 GLIS2Q9BZE0 524 aaPredicted RBP20.19■□□□□ 0.82
RARA-209ENST00000579727 CHMP4BQ9H444 224 aaKnown RBP20.19■□□□□ 0.82
RARA-209ENST00000579727 AKAP2Q9Y2D5 859 aa20.19■□□□□ 0.82
RARA-209ENST00000579727 POLR2AP24928 1970 aaKnown RBP20.19■□□□□ 0.82
RARA-209ENST00000579727 APBB1O00213 710 aa20.18■□□□□ 0.82
RARA-209ENST00000579727 GRIK5Q16478 980 aa20.18■□□□□ 0.82
RARA-209ENST00000579727 DLK2Q6UY11 383 aa20.18■□□□□ 0.82
RARA-209ENST00000579727 OGFOD1Q8N543 542 aa20.18■□□□□ 0.82
RARA-209ENST00000579727 AIDAQ96BJ3 306 aa20.18■□□□□ 0.82
RARA-209ENST00000579727 XAGE2Q96GT9 111 aa20.18■□□□□ 0.82
RARA-209ENST00000579727 WBP1LQ9NX94 342 aa20.18■□□□□ 0.82
RARA-209ENST00000579727 GGA3Q9NZ52 723 aa20.18■□□□□ 0.82
RARA-209ENST00000579727 NOP58Q9Y2X3 529 aaKnown RBP20.18■□□□□ 0.82
RARA-209ENST00000579727 SCARF1Q14162 830 aa20.17■□□□□ 0.82
RARA-209ENST00000579727 CCDC102BQ68D86 513 aa20.17■□□□□ 0.82
RARA-209ENST00000579727 RPAP2Q8IXW5 612 aaPredicted RBP20.17■□□□□ 0.82
RARA-209ENST00000579727 SCAF8Q9UPN6 1271 aaKnown RBP20.17■□□□□ 0.82
RARA-209ENST00000579727 PCDHAC2Q9Y5I4 1007 aa20.17■□□□□ 0.82
RARA-209ENST00000579727 NBPF9Q3BBW0 867 aa20.16■□□□□ 0.82
RARA-209ENST00000579727 BCL11AQ9H165 835 aa20.16■□□□□ 0.82
RARA-209ENST00000579727 HDAC9Q9UKV0 1011 aa20.16■□□□□ 0.82
RARA-209ENST00000579727 ECM29Q5VYK3 1845 aa20.16■□□□□ 0.82
RARA-209ENST00000579727 TRPM7Q96QT4 1865 aa20.16■□□□□ 0.82
RARA-209ENST00000579727 ADM5C9JUS6 153 aa20.15■□□□□ 0.82
RARA-209ENST00000579727 FKBP1AP62942 108 aaKnown RBP20.15■□□□□ 0.82
RARA-209ENST00000579727 TNNI3KQ59H18 835 aa20.15■□□□□ 0.82
RARA-209ENST00000579727 ANGEL2Q5VTE6 544 aaKnown RBP20.15■□□□□ 0.82
RARA-209ENST00000579727 ZC3H15Q8WU90 426 aaKnown RBP20.15■□□□□ 0.82
RARA-209ENST00000579727 PGAP2Q9UHJ9 254 aa20.15■□□□□ 0.82
RARA-209ENST00000579727 TTF2Q9UNY4 1162 aaKnown RBP20.15■□□□□ 0.82
RARA-209ENST00000579727 FPGT-TNNI3KV9GXZ4 949 aa20.15■□□□□ 0.82
RARA-209ENST00000579727 HMMRO75330 724 aa20.14■□□□□ 0.81
RARA-209ENST00000579727 HSPA8P11142 646 aaKnown RBP20.14■□□□□ 0.81
RARA-209ENST00000579727 GORABQ5T7V8 394 aa20.14■□□□□ 0.81
RARA-209ENST00000579727 USP48Q86UV5 1035 aa20.14■□□□□ 0.81
RARA-209ENST00000579727 GNL3LQ9NVN8 582 aaKnown RBP20.14■□□□□ 0.81
RARA-209ENST00000579727 SUPT16HQ9Y5B9 1047 aaKnown RBP20.14■□□□□ 0.81
RARA-209ENST00000579727 WNT10BO00744 389 aa20.13■□□□□ 0.81
RARA-209ENST00000579727 RASGRF1Q13972 1273 aa20.13■□□□□ 0.81
RARA-209ENST00000579727 CFAP100Q494V2 611 aa20.13■□□□□ 0.81
RARA-209ENST00000579727 DCPSQ96C86 337 aaKnown RBP20.13■□□□□ 0.81
RARA-209ENST00000579727 DBNDD2Q9BQY9 259 aa20.13■□□□□ 0.81
RARA-209ENST00000579727 ZNF408Q9H9D4 720 aa20.13■□□□□ 0.81
RARA-209ENST00000579727 IL1RAPL2Q9NP60 686 aa20.13■□□□□ 0.81
RARA-209ENST00000579727 TLR7Q9NYK1 1049 aaKnown RBP20.13■□□□□ 0.81
RARA-209ENST00000579727 AOX1Q06278 1338 aa20.12■□□□□ 0.81
RARA-209ENST00000579727 TMEM88BA6NKF7 163 aa20.12■□□□□ 0.81
RARA-209ENST00000579727 RBM5P52756 815 aaKnown RBP eCLIP20.12■□□□□ 0.81
RARA-209ENST00000579727 DLGAP5Q15398 846 aa20.12■□□□□ 0.81
RARA-209ENST00000579727 CDC37L1Q7L3B6 337 aa20.12■□□□□ 0.81
RARA-209ENST00000579727 KRT26Q7Z3Y9 468 aa20.12■□□□□ 0.81
RARA-209ENST00000579727 TBC1D22AQ8WUA7 517 aa20.12■□□□□ 0.81
RARA-209ENST00000579727 CCDC8Q9H0W5 538 aaPredicted RBP20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 135.9 ms