RNA–Protein interactions for RNA: ENST00000579230.1

KCTD2-204, Transcript of potassium channel tetramerization domain containing 2, humanhuman

TSL 1 (best)

Gene KCTD2, Length 950 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD2-204ENST00000579230 ATP2B4P23634 1241 aa12.21□□□□□ -0.45
KCTD2-204ENST00000579230 PTPN12Q05209 780 aaKnown RBP12.21□□□□□ -0.45
KCTD2-204ENST00000579230 ZBED3Q96IU2 234 aaPredicted RBP12.21□□□□□ -0.45
KCTD2-204ENST00000579230 SSC5DA1L4H1 1573 aa12.21□□□□□ -0.46
KCTD2-204ENST00000579230 MKRN3Q13064 507 aaKnown RBP12.2□□□□□ -0.46
KCTD2-204ENST00000579230 CCDC27Q2M243 656 aa12.2□□□□□ -0.46
KCTD2-204ENST00000579230 LDLRAD1Q5T700 205 aa12.2□□□□□ -0.46
KCTD2-204ENST00000579230 TXNRD3Q86VQ6 643 aa12.2□□□□□ -0.46
KCTD2-204ENST00000579230 ANKRD18AQ8IVF6 992 aa12.2□□□□□ -0.46
KCTD2-204ENST00000579230 FKTNO75072 461 aa12.19□□□□□ -0.46
KCTD2-204ENST00000579230 SASH1O94885 1247 aa12.19□□□□□ -0.46
KCTD2-204ENST00000579230 HSP90B1P14625 803 aaKnown RBP12.19□□□□□ -0.46
KCTD2-204ENST00000579230 GOLGA2Q08379 1002 aa12.19□□□□□ -0.46
KCTD2-204ENST00000579230 SPRYD7Q5W111 196 aa12.19□□□□□ -0.46
KCTD2-204ENST00000579230 METTL22Q9BUU2 404 aaPredicted RBP12.19□□□□□ -0.46
KCTD2-204ENST00000579230 CWC25Q9NXE8 425 aaPredicted RBP12.19□□□□□ -0.46
KCTD2-204ENST00000579230 MINPP1Q9UNW1 487 aa12.19□□□□□ -0.46
KCTD2-204ENST00000579230 CTSWP56202 376 aa12.18□□□□□ -0.46
KCTD2-204ENST00000579230 SREBF2Q12772 1141 aa12.18□□□□□ -0.46
KCTD2-204ENST00000579230 STRIP1Q5VSL9 837 aa12.18□□□□□ -0.46
KCTD2-204ENST00000579230 TTLL11Q8NHH1 800 aa12.18□□□□□ -0.46
KCTD2-204ENST00000579230 BSDC1Q9NW68 430 aaPredicted RBP12.18□□□□□ -0.46
KCTD2-204ENST00000579230 FZD1Q9UP38 647 aa12.18□□□□□ -0.46
KCTD2-204ENST00000579230 COL1A1P02452 1464 aaPredicted RBP12.18□□□□□ -0.46
KCTD2-204ENST00000579230 CEP290O15078 2479 aa12.18□□□□□ -0.46
KCTD2-204ENST00000579230 MYO3BQ8WXR4 1341 aa12.17□□□□□ -0.46
KCTD2-204ENST00000579230 POTEFA5A3E0 1075 aa12.17□□□□□ -0.46
KCTD2-204ENST00000579230 IGKV5-2P06315 115 aa12.17□□□□□ -0.46
KCTD2-204ENST00000579230 CHRM1P11229 460 aaPredicted RBP12.17□□□□□ -0.46
KCTD2-204ENST00000579230 KLRK1P26718 216 aa12.17□□□□□ -0.46
KCTD2-204ENST00000579230 CCT4P50991 539 aaKnown RBP12.17□□□□□ -0.46
KCTD2-204ENST00000579230 TTLL12Q14166 644 aaPredicted RBP12.17□□□□□ -0.46
KCTD2-204ENST00000579230 GREM2Q9H772 168 aa12.17□□□□□ -0.46
KCTD2-204ENST00000579230 CACNA1FO60840 1977 aa12.17□□□□□ -0.46
KCTD2-204ENST00000579230 IRS2Q9Y4H2 1338 aa12.16□□□□□ -0.46
KCTD2-204ENST00000579230 NF2P35240 595 aa12.16□□□□□ -0.46
KCTD2-204ENST00000579230 MAP3K11Q16584 847 aa12.16□□□□□ -0.46
KCTD2-204ENST00000579230 OTOP1Q7RTM1 612 aa12.16□□□□□ -0.46
KCTD2-204ENST00000579230 C8orf58Q8NAV2 365 aa12.16□□□□□ -0.46
KCTD2-204ENST00000579230 CDC5LQ99459 802 aaKnown RBP12.16□□□□□ -0.46
KCTD2-204ENST00000579230 TMEM106CQ9BVX2 250 aa12.16□□□□□ -0.46
KCTD2-204ENST00000579230 COA1Q9GZY4 146 aa12.16□□□□□ -0.46
KCTD2-204ENST00000579230 IFT57Q9NWB7 429 aa12.16□□□□□ -0.46
KCTD2-204ENST00000579230 CIZ1Q9ULV3 898 aaPredicted RBP12.16□□□□□ -0.46
KCTD2-204ENST00000579230 SZT2Q5T011 3432 aa12.15□□□□□ -0.46
KCTD2-204ENST00000579230 IGF2BP3O00425 579 aaKnown RBP eCLIP12.15□□□□□ -0.46
KCTD2-204ENST00000579230 ELL2O00472 640 aaPredicted RBP12.15□□□□□ -0.46
KCTD2-204ENST00000579230 MMP14P50281 582 aa12.15□□□□□ -0.46
KCTD2-204ENST00000579230 CAP1Q01518 475 aa12.15□□□□□ -0.46
KCTD2-204ENST00000579230 CALD1Q05682 793 aaKnown RBP12.15□□□□□ -0.46
KCTD2-204ENST00000579230 PRKG1Q13976 671 aa12.15□□□□□ -0.46
KCTD2-204ENST00000579230 HABP4Q5JVS0 413 aaKnown RBP12.15□□□□□ -0.46
KCTD2-204ENST00000579230 ARMC9Q7Z3E5 817 aa12.15□□□□□ -0.46
KCTD2-204ENST00000579230 ZNF467Q7Z7K2 595 aaPredicted RBP12.15□□□□□ -0.46
KCTD2-204ENST00000579230 APOBEC3FQ8IUX4 373 aaKnown RBP12.15□□□□□ -0.46
KCTD2-204ENST00000579230 WWC1Q8IX03 1113 aa12.15□□□□□ -0.46
KCTD2-204ENST00000579230 OGFOD1Q8N543 542 aa12.15□□□□□ -0.46
KCTD2-204ENST00000579230 ANGEL1Q9UNK9 670 aaKnown RBP12.15□□□□□ -0.46
KCTD2-204ENST00000579230 MAP3K2Q9Y2U5 619 aa12.15□□□□□ -0.46
KCTD2-204ENST00000579230 ARAP2Q8WZ64 1704 aa12.14□□□□□ -0.47
KCTD2-204ENST00000579230 ALDH1A1P00352 501 aa12.14□□□□□ -0.47
KCTD2-204ENST00000579230 IER5LQ5T953 404 aa12.14□□□□□ -0.47
KCTD2-204ENST00000579230 TTLL5Q6EMB2 1281 aa12.14□□□□□ -0.47
KCTD2-204ENST00000579230 KIAA0825Q8IV33 1275 aa12.14□□□□□ -0.47
KCTD2-204ENST00000579230 WDR63Q8IWG1 891 aa12.14□□□□□ -0.47
KCTD2-204ENST00000579230 GCC1Q96CN9 775 aa12.14□□□□□ -0.47
KCTD2-204ENST00000579230 CLMNQ96JQ2 1002 aa12.14□□□□□ -0.47
KCTD2-204ENST00000579230 LEMD3Q9Y2U8 911 aa12.14□□□□□ -0.47
KCTD2-204ENST00000579230 TRIM17Q9Y577 477 aa12.14□□□□□ -0.47
KCTD2-204ENST00000579230 PCDHAC2Q9Y5I4 1007 aa12.14□□□□□ -0.47
KCTD2-204ENST00000579230 ZSWIM8A7E2V4 1837 aa12.14□□□□□ -0.47
KCTD2-204ENST00000579230 ZNF804BA4D1E1 1349 aa12.13□□□□□ -0.47
KCTD2-204ENST00000579230 AOX1Q06278 1338 aa12.13□□□□□ -0.47
KCTD2-204ENST00000579230 IL16Q14005 1332 aa12.13□□□□□ -0.47
KCTD2-204ENST00000579230 PI4KAP2A4QPH2 592 aa12.13□□□□□ -0.47
KCTD2-204ENST00000579230 MANSC4A6NHS7 340 aaPredicted RBP12.13□□□□□ -0.47
KCTD2-204ENST00000579230 H7C1W4 665 aa12.13□□□□□ -0.47
KCTD2-204ENST00000579230 ZBTB48P10074 688 aaPredicted RBP12.13□□□□□ -0.47
KCTD2-204ENST00000579230 GJA5P36382 358 aa12.13□□□□□ -0.47
KCTD2-204ENST00000579230 CWF19L2Q2TBE0 894 aaKnown RBP12.13□□□□□ -0.47
KCTD2-204ENST00000579230 KSR2Q6VAB6 950 aa12.13□□□□□ -0.47
KCTD2-204ENST00000579230 CERS5Q8N5B7 392 aa12.13□□□□□ -0.47
KCTD2-204ENST00000579230 TSPYL6Q8N831 410 aa12.13□□□□□ -0.47
KCTD2-204ENST00000579230 PI4KAP1Q8N8J0 262 aa12.13□□□□□ -0.47
KCTD2-204ENST00000579230 MTMR14Q8NCE2 650 aa12.13□□□□□ -0.47
KCTD2-204ENST00000579230 FBXW7Q969H0 707 aa12.13□□□□□ -0.47
KCTD2-204ENST00000579230 WNK4Q96J92 1243 aa12.13□□□□□ -0.47
KCTD2-204ENST00000579230 DEFB129Q9H1M3 183 aa12.13□□□□□ -0.47
KCTD2-204ENST00000579230 TRIOBPQ9H2D6 2365 aa12.12□□□□□ -0.47
KCTD2-204ENST00000579230 NEURL1BA8MQ27 555 aa12.12□□□□□ -0.47
KCTD2-204ENST00000579230 POTEB2H3BUK9 544 aa12.12□□□□□ -0.47
KCTD2-204ENST00000579230 SEC24BO95487 1268 aa12.12□□□□□ -0.47
KCTD2-204ENST00000579230 CASP7P55210 303 aa12.12□□□□□ -0.47
KCTD2-204ENST00000579230 INHBEP58166 350 aa12.12□□□□□ -0.47
KCTD2-204ENST00000579230 GNAI1P63096 354 aa12.12□□□□□ -0.47
KCTD2-204ENST00000579230 GTF2IP78347 998 aa12.12□□□□□ -0.47
KCTD2-204ENST00000579230 INTS3Q68E01 1043 aaKnown RBP12.12□□□□□ -0.47
KCTD2-204ENST00000579230 ARMC5Q96C12 935 aa12.12□□□□□ -0.47
KCTD2-204ENST00000579230 PLA2G12BQ9BX93 195 aa12.12□□□□□ -0.47
KCTD2-204ENST00000579230 PCDHB8Q9UN66 801 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms