RNA–Protein interactions for RNA: ENST00000579007.5

GAPLINC-202, gastric adenocarcinoma associated, positive CD44 regulator, long intergenic non-coding RNA, humanhuman

TSL 3 BASIC

Gene GAPLINC, Length 643 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPLINC-202ENST00000579007 PRDM16Q9HAZ2 1276 aa6.3□□□□□ -1.4
GAPLINC-202ENST00000579007 IBTKQ9P2D0 1353 aaPredicted RBP6.3□□□□□ -1.4
GAPLINC-202ENST00000579007 UBN2Q6ZU65 1347 aa6.29□□□□□ -1.4
GAPLINC-202ENST00000579007 hCG_2014768A0A024R1R8 64 aa6.29□□□□□ -1.4
GAPLINC-202ENST00000579007 RCCD1A6NED2 376 aa6.29□□□□□ -1.4
GAPLINC-202ENST00000579007 ATP5J2-PTCD1G3V325 749 aa6.29□□□□□ -1.4
GAPLINC-202ENST00000579007 G3V3G9 751 aa6.29□□□□□ -1.4
GAPLINC-202ENST00000579007 FDX1P10109 184 aa6.29□□□□□ -1.4
GAPLINC-202ENST00000579007 PDE6BP35913 854 aa6.29□□□□□ -1.4
GAPLINC-202ENST00000579007 ST5P78524 1137 aa6.29□□□□□ -1.4
GAPLINC-202ENST00000579007 NR1H3Q13133 447 aa6.29□□□□□ -1.4
GAPLINC-202ENST00000579007 HLFQ16534 295 aa6.29□□□□□ -1.4
GAPLINC-202ENST00000579007 SOGA3Q5TF21 947 aa6.29□□□□□ -1.4
GAPLINC-202ENST00000579007 STYK1Q6J9G0 422 aa6.29□□□□□ -1.4
GAPLINC-202ENST00000579007 TMED8Q6PL24 325 aaPredicted RBP6.29□□□□□ -1.4
GAPLINC-202ENST00000579007 ANKMY2Q8IV38 441 aa6.29□□□□□ -1.4
GAPLINC-202ENST00000579007 C16orf71Q8IYS4 520 aaPredicted RBP6.29□□□□□ -1.4
GAPLINC-202ENST00000579007 SMC1BQ8NDV3 1235 aa6.29□□□□□ -1.4
GAPLINC-202ENST00000579007 C7orf43Q8WVR3 580 aa6.29□□□□□ -1.4
GAPLINC-202ENST00000579007 ZNF622Q969S3 477 aaKnown RBP eCLIP6.29□□□□□ -1.4
GAPLINC-202ENST00000579007 GPATCH3Q96I76 525 aa6.29□□□□□ -1.4
GAPLINC-202ENST00000579007 CFAP53Q96M91 514 aa6.29□□□□□ -1.4
GAPLINC-202ENST00000579007 PLEKHF1Q96S99 279 aa6.29□□□□□ -1.4
GAPLINC-202ENST00000579007 THUMPD2Q9BTF0 503 aaKnown RBP6.29□□□□□ -1.4
GAPLINC-202ENST00000579007 TEX13AQ9BXU3 409 aaPredicted RBP6.29□□□□□ -1.4
GAPLINC-202ENST00000579007 TGIF2Q9GZN2 237 aa6.29□□□□□ -1.4
GAPLINC-202ENST00000579007 TAOK3Q9H2K8 898 aa6.29□□□□□ -1.4
GAPLINC-202ENST00000579007 MKRN1Q9UHC7 482 aaKnown RBP6.29□□□□□ -1.4
GAPLINC-202ENST00000579007 TRPC6Q9Y210 931 aa6.29□□□□□ -1.4
GAPLINC-202ENST00000579007 KLRG2A4D1S0 409 aaPredicted RBP6.28□□□□□ -1.4
GAPLINC-202ENST00000579007 TTLL13PA6NNM8 815 aa6.28□□□□□ -1.4
GAPLINC-202ENST00000579007 DDX11L8A8MPP1 907 aa6.28□□□□□ -1.4
GAPLINC-202ENST00000579007 H3BRB1 525 aa6.28□□□□□ -1.4
GAPLINC-202ENST00000579007 PIK3CDO00329 1044 aa6.28□□□□□ -1.4
GAPLINC-202ENST00000579007 SNRPA1P09661 255 aaKnown RBP6.28□□□□□ -1.4
GAPLINC-202ENST00000579007 SKIP12755 728 aa6.28□□□□□ -1.4
GAPLINC-202ENST00000579007 IBSPP21815 317 aaPredicted RBP6.28□□□□□ -1.4
GAPLINC-202ENST00000579007 TAS1R3Q7RTX0 852 aa6.28□□□□□ -1.4
GAPLINC-202ENST00000579007 LRP10Q7Z4F1 713 aa6.28□□□□□ -1.4
GAPLINC-202ENST00000579007 METTL16Q86W50 562 aaKnown RBP6.28□□□□□ -1.4
GAPLINC-202ENST00000579007 GLYCTKQ8IVS8 523 aa6.28□□□□□ -1.4
GAPLINC-202ENST00000579007 EXOC8Q8IYI6 725 aa6.28□□□□□ -1.4
GAPLINC-202ENST00000579007 RGL4Q8IZJ4 473 aa6.28□□□□□ -1.4
GAPLINC-202ENST00000579007 PDCD7Q8N8D1 485 aaKnown RBP6.28□□□□□ -1.4
GAPLINC-202ENST00000579007 EPS8L1Q8TE68 723 aa6.28□□□□□ -1.4
GAPLINC-202ENST00000579007 MASTLQ96GX5 879 aa6.28□□□□□ -1.4
GAPLINC-202ENST00000579007 SPACA7Q96KW9 195 aa6.28□□□□□ -1.4
GAPLINC-202ENST00000579007 SETDB2Q96T68 719 aa6.28□□□□□ -1.4
GAPLINC-202ENST00000579007 GMLQ99445 158 aa6.28□□□□□ -1.4
GAPLINC-202ENST00000579007 TUT1Q9H6E5 874 aaKnown RBP6.28□□□□□ -1.4
GAPLINC-202ENST00000579007 METTL5Q9NRN9 209 aaKnown RBP6.28□□□□□ -1.4
GAPLINC-202ENST00000579007 MIS18AQ9NYP9 233 aa6.28□□□□□ -1.4
GAPLINC-202ENST00000579007 MAGEC2Q9UBF1 373 aaPredicted RBP6.28□□□□□ -1.4
GAPLINC-202ENST00000579007 TNRC18O15417 2968 aaPredicted RBP6.28□□□□□ -1.4
GAPLINC-202ENST00000579007 PPP1R3GB7ZBB8 358 aa6.27□□□□□ -1.41
GAPLINC-202ENST00000579007 DDNO94850 711 aaPredicted RBP6.27□□□□□ -1.41
GAPLINC-202ENST00000579007 VEGFAP15692 232 aaPredicted RBP6.27□□□□□ -1.41
GAPLINC-202ENST00000579007 RASA1P20936 1047 aa6.27□□□□□ -1.41
GAPLINC-202ENST00000579007 FGD1P98174 961 aa6.27□□□□□ -1.41
GAPLINC-202ENST00000579007 RBL2Q08999 1139 aa6.27□□□□□ -1.41
GAPLINC-202ENST00000579007 MTMR2Q13614 643 aa6.27□□□□□ -1.41
GAPLINC-202ENST00000579007 ERFEQ4G0M1 354 aa6.27□□□□□ -1.41
GAPLINC-202ENST00000579007 LDLRAD1Q5T700 205 aa6.27□□□□□ -1.41
GAPLINC-202ENST00000579007 COL13A1Q5TAT6 717 aaPredicted RBP6.27□□□□□ -1.41
GAPLINC-202ENST00000579007 TTLL7Q6ZT98 887 aa6.27□□□□□ -1.41
GAPLINC-202ENST00000579007 C3orf67Q6ZVT6 689 aa6.27□□□□□ -1.41
GAPLINC-202ENST00000579007 NBPF5PQ86XG9 351 aaPredicted RBP6.27□□□□□ -1.41
GAPLINC-202ENST00000579007 NT5DC4Q86YG4 428 aa6.27□□□□□ -1.41
GAPLINC-202ENST00000579007 DHX38Q92620 1227 aaKnown RBP6.27□□□□□ -1.41
GAPLINC-202ENST00000579007 PDZRN3Q9UPQ7 1066 aa6.27□□□□□ -1.41
GAPLINC-202ENST00000579007 NIP7Q9Y221 180 aaKnown RBP eCLIP6.27□□□□□ -1.41
GAPLINC-202ENST00000579007 NUDCQ9Y266 331 aa6.27□□□□□ -1.41
GAPLINC-202ENST00000579007 POLR2AP24928 1970 aaKnown RBP6.27□□□□□ -1.41
GAPLINC-202ENST00000579007 MAP3K15Q6ZN16 1313 aa6.26□□□□□ -1.41
GAPLINC-202ENST00000579007 PASKQ96RG2 1323 aa6.26□□□□□ -1.41
GAPLINC-202ENST00000579007 FAM177BA6PVY3 158 aa6.26□□□□□ -1.41
GAPLINC-202ENST00000579007 HOXA2O43364 376 aa6.26□□□□□ -1.41
GAPLINC-202ENST00000579007 HTATSF1O43719 755 aaKnown RBP6.26□□□□□ -1.41
GAPLINC-202ENST00000579007 SLC34A2O95436 690 aa6.26□□□□□ -1.41
GAPLINC-202ENST00000579007 NTSR2O95665 410 aa6.26□□□□□ -1.41
GAPLINC-202ENST00000579007 ABL1P00519 1130 aa6.26□□□□□ -1.41
GAPLINC-202ENST00000579007 HSPA1AP0DMV8 641 aaKnown RBP6.26□□□□□ -1.41
GAPLINC-202ENST00000579007 HSPA1BP0DMV9 641 aaKnown RBP6.26□□□□□ -1.41
GAPLINC-202ENST00000579007 GTF2F1P35269 517 aaKnown RBP eCLIP6.26□□□□□ -1.41
GAPLINC-202ENST00000579007 FOSBP53539 338 aa6.26□□□□□ -1.41
GAPLINC-202ENST00000579007 PRSS12P56730 875 aa6.26□□□□□ -1.41
GAPLINC-202ENST00000579007 EIF4A1P60842 406 aaKnown RBP6.26□□□□□ -1.41
GAPLINC-202ENST00000579007 FKBP4Q02790 459 aaKnown RBP eCLIP6.26□□□□□ -1.41
GAPLINC-202ENST00000579007 GNL2Q13823 731 aaKnown RBP6.26□□□□□ -1.41
GAPLINC-202ENST00000579007 NFE2L2Q16236 605 aa6.26□□□□□ -1.41
GAPLINC-202ENST00000579007 PROSER3Q2NL68 480 aa6.26□□□□□ -1.41
GAPLINC-202ENST00000579007 CRY2Q49AN0 593 aa6.26□□□□□ -1.41
GAPLINC-202ENST00000579007 CCDC93Q567U6 631 aa6.26□□□□□ -1.41
GAPLINC-202ENST00000579007 C6orf132Q5T0Z8 1188 aa6.26□□□□□ -1.41
GAPLINC-202ENST00000579007 CLEC4GQ6UXB4 293 aa6.26□□□□□ -1.41
GAPLINC-202ENST00000579007 RTF1Q92541 710 aaKnown RBP6.26□□□□□ -1.41
GAPLINC-202ENST00000579007 CNKSR1Q969H4 720 aa6.26□□□□□ -1.41
GAPLINC-202ENST00000579007 PHF12Q96QT6 1004 aa6.26□□□□□ -1.41
GAPLINC-202ENST00000579007 ZNF277Q9NRM2 450 aaPredicted RBP6.26□□□□□ -1.41
GAPLINC-202ENST00000579007 ZNF652Q9Y2D9 606 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms