RNA–Protein interactions for RNA: ENST00000578706.5

UBB-208, Transcript of ubiquitin B, humanhuman

TSL 3

Gene UBB, Length 500 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBB-208ENST00000578706 U2AF1Q01081 240 aaKnown RBP eCLIP8.18□□□□□ -1.1
UBB-208ENST00000578706 ARHGEF6Q15052 776 aa8.18□□□□□ -1.1
UBB-208ENST00000578706 TDHQ8IZJ6 230 aa8.18□□□□□ -1.1
UBB-208ENST00000578706 OPTNQ96CV9 577 aa8.18□□□□□ -1.1
UBB-208ENST00000578706 TRIM47Q96LD4 638 aa8.18□□□□□ -1.1
UBB-208ENST00000578706 RNF208Q9H0X6 261 aa8.18□□□□□ -1.1
UBB-208ENST00000578706 UNC93B1Q9H1C4 597 aa8.18□□□□□ -1.1
UBB-208ENST00000578706 ZFYVE28Q9HCC9 887 aa8.18□□□□□ -1.1
UBB-208ENST00000578706 ZMYND8Q9ULU4 1186 aaPredicted RBP8.18□□□□□ -1.1
UBB-208ENST00000578706 PCDHAC2Q9Y5I4 1007 aa8.18□□□□□ -1.1
UBB-208ENST00000578706 IRS2Q9Y4H2 1338 aa8.18□□□□□ -1.1
UBB-208ENST00000578706 TLR2O60603 784 aa8.17□□□□□ -1.1
UBB-208ENST00000578706 OSBPP22059 807 aa8.17□□□□□ -1.1
UBB-208ENST00000578706 GRK4P32298 578 aa8.17□□□□□ -1.1
UBB-208ENST00000578706 MAGEA10P43363 369 aaPredicted RBP8.17□□□□□ -1.1
UBB-208ENST00000578706 RPS8P62241 208 aaKnown RBP8.17□□□□□ -1.1
UBB-208ENST00000578706 NBPF12Q5TAG4 269 aaPredicted RBP8.17□□□□□ -1.1
UBB-208ENST00000578706 PODNQ7Z5L7 613 aa8.17□□□□□ -1.1
UBB-208ENST00000578706 DIS3LQ8TF46 1054 aaKnown RBP8.17□□□□□ -1.1
UBB-208ENST00000578706 FAM122AQ96E09 287 aa8.17□□□□□ -1.1
UBB-208ENST00000578706 FAM161BQ96MY7 647 aa8.17□□□□□ -1.1
UBB-208ENST00000578706 ELP3Q9H9T3 547 aa8.17□□□□□ -1.1
UBB-208ENST00000578706 SEC31BQ9NQW1 1179 aa8.17□□□□□ -1.1
UBB-208ENST00000578706 SRRDQ9UH36 339 aa8.17□□□□□ -1.1
UBB-208ENST00000578706 GGA1Q9UJY5 639 aa8.17□□□□□ -1.1
UBB-208ENST00000578706 RIPOR2Q9Y4F9 1068 aa8.17□□□□□ -1.1
UBB-208ENST00000578706 SPEF2Q9C093 1822 aa8.17□□□□□ -1.1
UBB-208ENST00000578706 CCL15-CCL14A0A0B4J2E2 113 aa8.16□□□□□ -1.1
UBB-208ENST00000578706 G3V3G9 751 aa8.16□□□□□ -1.1
UBB-208ENST00000578706 PPP1R12BO60237 982 aaPredicted RBP8.16□□□□□ -1.1
UBB-208ENST00000578706 SGPL1O95470 568 aa8.16□□□□□ -1.1
UBB-208ENST00000578706 GNRH1P01148 92 aa8.16□□□□□ -1.1
UBB-208ENST00000578706 PRMT2P55345 433 aa8.16□□□□□ -1.1
UBB-208ENST00000578706 CCL15Q16663 113 aa8.16□□□□□ -1.1
UBB-208ENST00000578706 DCAF8Q5TAQ9 597 aa8.16□□□□□ -1.1
UBB-208ENST00000578706 CDAN1Q8IWY9 1227 aa8.16□□□□□ -1.1
UBB-208ENST00000578706 C7orf61Q8IZ16 206 aa8.16□□□□□ -1.1
UBB-208ENST00000578706 OGFOD1Q8N543 542 aa8.16□□□□□ -1.1
UBB-208ENST00000578706 FAM89AQ96GI7 184 aa8.16□□□□□ -1.1
UBB-208ENST00000578706 ANKIB1Q9P2G1 1089 aa8.16□□□□□ -1.1
UBB-208ENST00000578706 DDX60LQ5H9U9 1706 aaKnown RBP8.15□□□□□ -1.1
UBB-208ENST00000578706 ZNF804BA4D1E1 1349 aa8.15□□□□□ -1.1
UBB-208ENST00000578706 ADGRA2Q96PE1 1338 aa8.15□□□□□ -1.1
UBB-208ENST00000578706 NEFMP07197 916 aa8.15□□□□□ -1.1
UBB-208ENST00000578706 SYN1P17600 705 aa8.15□□□□□ -1.1
UBB-208ENST00000578706 HSP90AB3PQ58FF7 597 aa8.15□□□□□ -1.1
UBB-208ENST00000578706 FAM109BQ6ICB4 259 aaPredicted RBP8.15□□□□□ -1.1
UBB-208ENST00000578706 C17orf99Q6UX52 265 aa8.15□□□□□ -1.1
UBB-208ENST00000578706 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.15□□□□□ -1.1
UBB-208ENST00000578706 KIAA0825Q8IV33 1275 aa8.15□□□□□ -1.1
UBB-208ENST00000578706 ANKRD13AQ8IZ07 590 aa8.15□□□□□ -1.1
UBB-208ENST00000578706 PAWRQ96IZ0 340 aaKnown RBP8.15□□□□□ -1.1
UBB-208ENST00000578706 ARAP2Q8WZ64 1704 aa8.15□□□□□ -1.11
UBB-208ENST00000578706 MED23Q9ULK4 1368 aa8.14□□□□□ -1.11
UBB-208ENST00000578706 MYPNQ86TC9 1320 aa8.14□□□□□ -1.11
UBB-208ENST00000578706 MYO3BQ8WXR4 1341 aa8.14□□□□□ -1.11
UBB-208ENST00000578706 TNFRSF10AO00220 468 aa8.14□□□□□ -1.11
UBB-208ENST00000578706 PSMC4P43686 418 aa8.14□□□□□ -1.11
UBB-208ENST00000578706 IREB2P48200 963 aaKnown RBP8.14□□□□□ -1.11
UBB-208ENST00000578706 KIF22Q14807 665 aa8.14□□□□□ -1.11
UBB-208ENST00000578706 RTL5Q5HYW3 569 aaPredicted RBP8.14□□□□□ -1.11
UBB-208ENST00000578706 STRIP1Q5VSL9 837 aa8.14□□□□□ -1.11
UBB-208ENST00000578706 COPS6Q7L5N1 327 aa8.14□□□□□ -1.11
UBB-208ENST00000578706 TXNRD3Q86VQ6 643 aa8.14□□□□□ -1.11
UBB-208ENST00000578706 MAFAQ8NHW3 353 aaPredicted RBP8.14□□□□□ -1.11
UBB-208ENST00000578706 XAGE3Q8WTP9 111 aa8.14□□□□□ -1.11
UBB-208ENST00000578706 CDX2Q99626 313 aaPredicted RBP8.14□□□□□ -1.11
UBB-208ENST00000578706 ISCA1Q9BUE6 129 aa8.14□□□□□ -1.11
UBB-208ENST00000578706 CRISPLD2Q9H0B8 497 aa8.14□□□□□ -1.11
UBB-208ENST00000578706 CACNA1AO00555 2505 aa8.14□□□□□ -1.11
UBB-208ENST00000578706 XDHP47989 1333 aa8.13□□□□□ -1.11
UBB-208ENST00000578706 CLRN2A0PK11 232 aa8.13□□□□□ -1.11
UBB-208ENST00000578706 BTBD19C9JJ37 291 aa8.13□□□□□ -1.11
UBB-208ENST00000578706 EIF2S2P20042 333 aaKnown RBP8.13□□□□□ -1.11
UBB-208ENST00000578706 GTF2A2P52657 109 aa8.13□□□□□ -1.11
UBB-208ENST00000578706 PRKCZQ05513 592 aa8.13□□□□□ -1.11
UBB-208ENST00000578706 VGLL4Q14135 290 aa8.13□□□□□ -1.11
UBB-208ENST00000578706 RAET1EQ8TD07 263 aa8.13□□□□□ -1.11
UBB-208ENST00000578706 DEFB118Q96PH6 123 aa8.13□□□□□ -1.11
UBB-208ENST00000578706 UBE2OQ9C0C9 1292 aaKnown RBP8.13□□□□□ -1.11
UBB-208ENST00000578706 MRS2Q9HD23 443 aa8.13□□□□□ -1.11
UBB-208ENST00000578706 PAK6Q9NQU5 681 aaPredicted RBP8.13□□□□□ -1.11
UBB-208ENST00000578706 PPP2R3BQ9Y5P8 575 aa8.13□□□□□ -1.11
UBB-208ENST00000578706 DNAH12Q6ZR08 3092 aa8.13□□□□□ -1.11
UBB-208ENST00000578706 DOCK3Q8IZD9 2030 aa8.12□□□□□ -1.11
UBB-208ENST00000578706 SYNGAP1Q96PV0 1343 aa8.12□□□□□ -1.11
UBB-208ENST00000578706 TMEM265A0A087WTH1 108 aa8.12□□□□□ -1.11
UBB-208ENST00000578706 IRS4O14654 1257 aaPredicted RBP8.12□□□□□ -1.11
UBB-208ENST00000578706 KLRK1P26718 216 aa8.12□□□□□ -1.11
UBB-208ENST00000578706 MAP3K12Q12852 859 aa8.12□□□□□ -1.11
UBB-208ENST00000578706 AIMP1Q12904 312 aaKnown RBP8.12□□□□□ -1.11
UBB-208ENST00000578706 RALBP1Q15311 655 aa8.12□□□□□ -1.11
UBB-208ENST00000578706 SUPT20HL1Q3ZLR7 823 aa8.12□□□□□ -1.11
UBB-208ENST00000578706 CERS5Q8N5B7 392 aa8.12□□□□□ -1.11
UBB-208ENST00000578706 SYMPKQ92797 1274 aaKnown RBP8.12□□□□□ -1.11
UBB-208ENST00000578706 FBXW7Q969H0 707 aa8.12□□□□□ -1.11
UBB-208ENST00000578706 TEPSINQ96N21 525 aa8.12□□□□□ -1.11
UBB-208ENST00000578706 CPA4Q9UI42 421 aa8.12□□□□□ -1.11
UBB-208ENST00000578706 GABRQQ9UN88 632 aa8.12□□□□□ -1.11
UBB-208ENST00000578706 SPDYE2BA6NHP3 402 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 134.5 ms