RNA–Protein interactions for RNA: ENST00000578501.5

CSNK1D-208, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 1,124 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-208ENST00000578501 TMEM57Q8N5G2 664 aa17.03■□□□□ 0.32
CSNK1D-208ENST00000578501 CIAO1O76071 339 aa17.02■□□□□ 0.32
CSNK1D-208ENST00000578501 CDC37L1Q7L3B6 337 aa17.02■□□□□ 0.32
CSNK1D-208ENST00000578501 FTSJ3Q8IY81 847 aaKnown RBP17.02■□□□□ 0.32
CSNK1D-208ENST00000578501 DZIP1LQ8IYY4 767 aaKnown RBP17.02■□□□□ 0.32
CSNK1D-208ENST00000578501 GLIS2Q9BZE0 524 aaPredicted RBP17.02■□□□□ 0.32
CSNK1D-208ENST00000578501 EGFRP00533 1210 aa17.01■□□□□ 0.31
CSNK1D-208ENST00000578501 GNAI2P04899 355 aa17.01■□□□□ 0.31
CSNK1D-208ENST00000578501 FKBP1AP62942 108 aaKnown RBP17.01■□□□□ 0.31
CSNK1D-208ENST00000578501 GTF2IP78347 998 aa17.01■□□□□ 0.31
CSNK1D-208ENST00000578501 KIF4BQ2VIQ3 1234 aa17.01■□□□□ 0.31
CSNK1D-208ENST00000578501 TBC1D10BQ4KMP7 808 aaPredicted RBP17.01■□□□□ 0.31
CSNK1D-208ENST00000578501 COPRSQ9NQ92 184 aa17.01■□□□□ 0.31
CSNK1D-208ENST00000578501 CASP8AP2Q9UKL3 1982 aa17■□□□□ 0.31
CSNK1D-208ENST00000578501 SASH1O94885 1247 aa17■□□□□ 0.31
CSNK1D-208ENST00000578501 HIBADHP31937 336 aaKnown RBP17■□□□□ 0.31
CSNK1D-208ENST00000578501 ATG9AQ7Z3C6 839 aa17■□□□□ 0.31
CSNK1D-208ENST00000578501 OGFOD1Q8N543 542 aa17■□□□□ 0.31
CSNK1D-208ENST00000578501 FAM84BQ96KN1 310 aaPredicted RBP17■□□□□ 0.31
CSNK1D-208ENST00000578501 ZNF408Q9H9D4 720 aa17■□□□□ 0.31
CSNK1D-208ENST00000578501 SAGE1Q9NXZ1 904 aa17■□□□□ 0.31
CSNK1D-208ENST00000578501 ZNF646O15015 1829 aaPredicted RBP16.99■□□□□ 0.31
CSNK1D-208ENST00000578501 FGFR2P21802 821 aa16.99■□□□□ 0.31
CSNK1D-208ENST00000578501 PUM3Q15397 648 aaKnown RBP16.99■□□□□ 0.31
CSNK1D-208ENST00000578501 FBXO33Q7Z6M2 555 aa16.99■□□□□ 0.31
CSNK1D-208ENST00000578501 TDRD7Q8NHU6 1098 aaKnown RBP16.99■□□□□ 0.31
CSNK1D-208ENST00000578501 FBXW7Q969H0 707 aa16.99■□□□□ 0.31
CSNK1D-208ENST00000578501 MXD3Q9BW11 206 aa16.99■□□□□ 0.31
CSNK1D-208ENST00000578501 MYOZ2Q9NPC6 264 aa16.99■□□□□ 0.31
CSNK1D-208ENST00000578501 SRGAP3O43295 1099 aa16.98■□□□□ 0.31
CSNK1D-208ENST00000578501 MS4A1P11836 297 aa16.98■□□□□ 0.31
CSNK1D-208ENST00000578501 RLBP1P12271 317 aa16.98■□□□□ 0.31
CSNK1D-208ENST00000578501 IL15P40933 162 aaPredicted RBP16.98■□□□□ 0.31
CSNK1D-208ENST00000578501 GYG1P46976 350 aa16.98■□□□□ 0.31
CSNK1D-208ENST00000578501 CAVIN4Q5BKX8 364 aa16.98■□□□□ 0.31
CSNK1D-208ENST00000578501 RBM26Q5T8P6 1007 aaKnown RBP16.98■□□□□ 0.31
CSNK1D-208ENST00000578501 RCAN3Q9UKA8 241 aa16.98■□□□□ 0.31
CSNK1D-208ENST00000578501 FAM205AQ6ZU69 1335 aa16.97■□□□□ 0.31
CSNK1D-208ENST00000578501 PDE4DIPQ5VU43 2346 aa16.97■□□□□ 0.31
CSNK1D-208ENST00000578501 ZBTB7BO15156 539 aaPredicted RBP16.97■□□□□ 0.31
CSNK1D-208ENST00000578501 IFIT1P09914 478 aaKnown RBP16.97■□□□□ 0.31
CSNK1D-208ENST00000578501 HUNKP57058 714 aa16.97■□□□□ 0.31
CSNK1D-208ENST00000578501 PRPF38BQ5VTL8 546 aaKnown RBP16.97■□□□□ 0.31
CSNK1D-208ENST00000578501 LPIN2Q92539 896 aa16.97■□□□□ 0.31
CSNK1D-208ENST00000578501 DCPSQ96C86 337 aaKnown RBP16.97■□□□□ 0.31
CSNK1D-208ENST00000578501 CEP126Q9P2H0 1117 aa16.97■□□□□ 0.31
CSNK1D-208ENST00000578501 HDAC9Q9UKV0 1011 aa16.97■□□□□ 0.31
CSNK1D-208ENST00000578501 SCARF1Q14162 830 aa16.96■□□□□ 0.31
CSNK1D-208ENST00000578501 VPS37DQ86XT2 251 aa16.96■□□□□ 0.31
CSNK1D-208ENST00000578501 ITPRIPQ8IWB1 547 aa16.96■□□□□ 0.31
CSNK1D-208ENST00000578501 CCDC102AQ96A19 550 aa16.96■□□□□ 0.31
CSNK1D-208ENST00000578501 SIL1Q9H173 461 aa16.96■□□□□ 0.31
CSNK1D-208ENST00000578501 PA2G4Q9UQ80 394 aaKnown RBP16.96■□□□□ 0.31
CSNK1D-208ENST00000578501 PITPNM2Q9BZ72 1349 aa16.96■□□□□ 0.3
CSNK1D-208ENST00000578501 SLC5A1P13866 664 aa16.95■□□□□ 0.3
CSNK1D-208ENST00000578501 RGMBQ6NW40 437 aa16.95■□□□□ 0.3
CSNK1D-208ENST00000578501 KRT26Q7Z3Y9 468 aa16.95■□□□□ 0.3
CSNK1D-208ENST00000578501 KIAA0825Q8IV33 1275 aa16.95■□□□□ 0.3
CSNK1D-208ENST00000578501 CERS5Q8N5B7 392 aa16.95■□□□□ 0.3
CSNK1D-208ENST00000578501 SOX10P56693 466 aa16.94■□□□□ 0.3
CSNK1D-208ENST00000578501 USP48Q86UV5 1035 aa16.94■□□□□ 0.3
CSNK1D-208ENST00000578501 C2orf69Q8N8R5 385 aa16.94■□□□□ 0.3
CSNK1D-208ENST00000578501 MTMR14Q8NCE2 650 aa16.94■□□□□ 0.3
CSNK1D-208ENST00000578501 GGA3Q9NZ52 723 aa16.94■□□□□ 0.3
CSNK1D-208ENST00000578501 PNMA6EA0A0J9YXQ4 647 aa16.93■□□□□ 0.3
CSNK1D-208ENST00000578501 WNT10BO00744 389 aa16.93■□□□□ 0.3
CSNK1D-208ENST00000578501 ZBTB22O15209 634 aa16.93■□□□□ 0.3
CSNK1D-208ENST00000578501 BCAMP50895 628 aa16.93■□□□□ 0.3
CSNK1D-208ENST00000578501 SULF1Q8IWU6 871 aa16.93■□□□□ 0.3
CSNK1D-208ENST00000578501 PANK1Q8TE04 598 aa16.93■□□□□ 0.3
CSNK1D-208ENST00000578501 ZBED3Q96IU2 234 aaPredicted RBP16.93■□□□□ 0.3
CSNK1D-208ENST00000578501 ZIC5Q96T25 663 aa16.93■□□□□ 0.3
CSNK1D-208ENST00000578501 ATP8B2P98198 1209 aa16.92■□□□□ 0.3
CSNK1D-208ENST00000578501 POLA2Q14181 598 aa16.92■□□□□ 0.3
CSNK1D-208ENST00000578501 ATP2B3Q16720 1220 aa16.92■□□□□ 0.3
CSNK1D-208ENST00000578501 NBPF9Q3BBW0 867 aa16.92■□□□□ 0.3
CSNK1D-208ENST00000578501 MFSD14BQ5SR56 506 aa16.92■□□□□ 0.3
CSNK1D-208ENST00000578501 ANGEL2Q5VTE6 544 aaKnown RBP16.92■□□□□ 0.3
CSNK1D-208ENST00000578501 SSH3Q8TE77 659 aa16.92■□□□□ 0.3
CSNK1D-208ENST00000578501 TBC1D22AQ8WUA7 517 aa16.92■□□□□ 0.3
CSNK1D-208ENST00000578501 GBA2Q9HCG7 927 aaPredicted RBP16.92■□□□□ 0.3
CSNK1D-208ENST00000578501 ASTN2O75129 1339 aaPredicted RBP16.92■□□□□ 0.3
CSNK1D-208ENST00000578501 FRAT2O75474 233 aaPredicted RBP16.91■□□□□ 0.3
CSNK1D-208ENST00000578501 TRPA1O75762 1119 aa16.91■□□□□ 0.3
CSNK1D-208ENST00000578501 KIF23Q02241 960 aaPredicted RBP16.91■□□□□ 0.3
CSNK1D-208ENST00000578501 REM2Q8IYK8 340 aaPredicted RBP16.91■□□□□ 0.3
CSNK1D-208ENST00000578501 RNF186Q9NXI6 227 aa16.91■□□□□ 0.3
CSNK1D-208ENST00000578501 JAG2Q9Y219 1238 aa16.91■□□□□ 0.3
CSNK1D-208ENST00000578501 AKAP2Q9Y2D5 859 aa16.91■□□□□ 0.3
CSNK1D-208ENST00000578501 FAM155AB1AL88 458 aaPredicted RBP16.9■□□□□ 0.3
CSNK1D-208ENST00000578501 ADM5C9JUS6 153 aa16.9■□□□□ 0.3
CSNK1D-208ENST00000578501 ZNF157P51786 506 aaPredicted RBP16.9■□□□□ 0.3
CSNK1D-208ENST00000578501 MVPQ14764 893 aaKnown RBP16.9■□□□□ 0.3
CSNK1D-208ENST00000578501 DLGAP5Q15398 846 aa16.9■□□□□ 0.3
CSNK1D-208ENST00000578501 CTU1Q7Z7A3 348 aaKnown RBP16.9■□□□□ 0.3
CSNK1D-208ENST00000578501 SUGT1Q9Y2Z0 365 aa16.9■□□□□ 0.3
CSNK1D-208ENST00000578501 G3BP1Q13283 466 aaKnown RBP eCLIP16.89■□□□□ 0.29
CSNK1D-208ENST00000578501 PDE3AQ14432 1141 aa16.89■□□□□ 0.29
CSNK1D-208ENST00000578501 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.89■□□□□ 0.29
CSNK1D-208ENST00000578501 CHMP4BQ9H444 224 aaKnown RBP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms