RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 ZSCAN25Q6NSZ9 544 aa16.24■□□□□ 0.19
SRSF1-202ENST00000578430 RTFDC1Q9BY42 306 aaPredicted RBP16.24■□□□□ 0.19
SRSF1-202ENST00000578430 POLLQ9UGP5 575 aa16.24■□□□□ 0.19
SRSF1-202ENST00000578430 CACNA1SQ13698 1873 aa16.23■□□□□ 0.19
SRSF1-202ENST00000578430 WTIPA6NIX2 430 aaPredicted RBP16.23■□□□□ 0.19
SRSF1-202ENST00000578430 CCDC93Q567U6 631 aa16.23■□□□□ 0.19
SRSF1-202ENST00000578430 TMED8Q6PL24 325 aaPredicted RBP16.23■□□□□ 0.19
SRSF1-202ENST00000578430 RTKN2Q8IZC4 609 aa16.23■□□□□ 0.19
SRSF1-202ENST00000578430 ESYT1Q9BSJ8 1104 aa16.23■□□□□ 0.19
SRSF1-202ENST00000578430 ZC3H12CQ9C0D7 883 aaKnown RBP16.23■□□□□ 0.19
SRSF1-202ENST00000578430 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.23■□□□□ 0.19
SRSF1-202ENST00000578430 SNRKQ9NRH2 765 aa16.23■□□□□ 0.19
SRSF1-202ENST00000578430 RAD50Q92878 1312 aa16.22■□□□□ 0.19
SRSF1-202ENST00000578430 EPB41L2O43491 1005 aaKnown RBP16.22■□□□□ 0.19
SRSF1-202ENST00000578430 FRAT2O75474 233 aaPredicted RBP16.22■□□□□ 0.19
SRSF1-202ENST00000578430 REC8O95072 547 aa16.22■□□□□ 0.19
SRSF1-202ENST00000578430 KLRK1P26718 216 aa16.22■□□□□ 0.19
SRSF1-202ENST00000578430 DALRD3Q5D0E6 543 aaKnown RBP16.22■□□□□ 0.19
SRSF1-202ENST00000578430 TDRD7Q8NHU6 1098 aaKnown RBP16.22■□□□□ 0.19
SRSF1-202ENST00000578430 EDC3Q96F86 508 aaKnown RBP16.22■□□□□ 0.19
SRSF1-202ENST00000578430 COA1Q9GZY4 146 aa16.22■□□□□ 0.19
SRSF1-202ENST00000578430 DUOX1Q9NRD9 1551 aa16.21■□□□□ 0.19
SRSF1-202ENST00000578430 SNED1Q8TER0 1413 aa16.21■□□□□ 0.19
SRSF1-202ENST00000578430 CYP2E1P05181 493 aaPredicted RBP16.21■□□□□ 0.19
SRSF1-202ENST00000578430 IL1R1P14778 569 aa16.21■□□□□ 0.19
SRSF1-202ENST00000578430 WASHC4Q2M389 1173 aa16.21■□□□□ 0.19
SRSF1-202ENST00000578430 TXNRD3Q86VQ6 643 aa16.21■□□□□ 0.19
SRSF1-202ENST00000578430 VPS33BQ9H267 617 aa16.21■□□□□ 0.19
SRSF1-202ENST00000578430 TSHZ2Q9NRE2 1034 aa16.21■□□□□ 0.19
SRSF1-202ENST00000578430 NDUFB9Q9Y6M9 179 aa16.21■□□□□ 0.19
SRSF1-202ENST00000578430 C21orf2O43822 256 aa16.2■□□□□ 0.18
SRSF1-202ENST00000578430 YBX3P16989 372 aaKnown RBP eCLIP16.2■□□□□ 0.18
SRSF1-202ENST00000578430 MAP3K12Q12852 859 aa16.2■□□□□ 0.18
SRSF1-202ENST00000578430 PI16Q6UXB8 463 aa16.2■□□□□ 0.18
SRSF1-202ENST00000578430 SLC51AQ86UW1 340 aa16.2■□□□□ 0.18
SRSF1-202ENST00000578430 ZGPATQ8N5A5 531 aaKnown RBP16.2■□□□□ 0.18
SRSF1-202ENST00000578430 WDR66Q8TBY9 1149 aa16.2■□□□□ 0.18
SRSF1-202ENST00000578430 PSMD1Q99460 953 aa16.2■□□□□ 0.18
SRSF1-202ENST00000578430 ANTXR1Q9H6X2 564 aa16.2■□□□□ 0.18
SRSF1-202ENST00000578430 CD209Q9NNX6 404 aa16.2■□□□□ 0.18
SRSF1-202ENST00000578430 SALL1Q9NSC2 1324 aa16.19■□□□□ 0.18
SRSF1-202ENST00000578430 BRCA1P38398 1863 aaKnown RBP16.19■□□□□ 0.18
SRSF1-202ENST00000578430 RNF113AO15541 343 aaKnown RBP16.19■□□□□ 0.18
SRSF1-202ENST00000578430 SGSM2O43147 1006 aa16.19■□□□□ 0.18
SRSF1-202ENST00000578430 SEC24BO95487 1268 aa16.19■□□□□ 0.18
SRSF1-202ENST00000578430 OLFM4Q6UX06 510 aa16.19■□□□□ 0.18
SRSF1-202ENST00000578430 HELLSQ9NRZ9 838 aa16.19■□□□□ 0.18
SRSF1-202ENST00000578430 ZNF219Q9P2Y4 722 aaPredicted RBP16.19■□□□□ 0.18
SRSF1-202ENST00000578430 MFAP1P55081 439 aaKnown RBP16.18■□□□□ 0.18
SRSF1-202ENST00000578430 UBE3CQ15386 1083 aa16.18■□□□□ 0.18
SRSF1-202ENST00000578430 ZMYM1Q5SVZ6 1142 aa16.18■□□□□ 0.18
SRSF1-202ENST00000578430 SPTY2D1Q68D10 685 aaPredicted RBP16.18■□□□□ 0.18
SRSF1-202ENST00000578430 CWC27Q6UX04 472 aaKnown RBP16.18■□□□□ 0.18
SRSF1-202ENST00000578430 PIH1D3Q9NQM4 214 aaKnown RBP16.18■□□□□ 0.18
SRSF1-202ENST00000578430 MYH13Q9UKX3 1938 aa16.17■□□□□ 0.18
SRSF1-202ENST00000578430 G3V3G9 751 aa16.17■□□□□ 0.18
SRSF1-202ENST00000578430 NMIQ13287 307 aaPredicted RBP16.17■□□□□ 0.18
SRSF1-202ENST00000578430 MCMDC2Q4G0Z9 681 aa16.17■□□□□ 0.18
SRSF1-202ENST00000578430 DCAF8Q5TAQ9 597 aa16.17■□□□□ 0.18
SRSF1-202ENST00000578430 KIAA1211Q6ZU35 1233 aa16.17■□□□□ 0.18
SRSF1-202ENST00000578430 PODNQ7Z5L7 613 aa16.17■□□□□ 0.18
SRSF1-202ENST00000578430 TBC1D22AQ8WUA7 517 aa16.17■□□□□ 0.18
SRSF1-202ENST00000578430 GPR101Q96P66 508 aaPredicted RBP16.17■□□□□ 0.18
SRSF1-202ENST00000578430 LRP2BPQ9P2M1 347 aa16.17■□□□□ 0.18
SRSF1-202ENST00000578430 IQSEC3Q9UPP2 1182 aaPredicted RBP16.17■□□□□ 0.18
SRSF1-202ENST00000578430 DOCK2Q92608 1830 aa16.17■□□□□ 0.18
SRSF1-202ENST00000578430 FAM205AQ6ZU69 1335 aa16.17■□□□□ 0.18
SRSF1-202ENST00000578430 COL1A1P02452 1464 aaPredicted RBP16.16■□□□□ 0.18
SRSF1-202ENST00000578430 MYH7P12883 1935 aa16.16■□□□□ 0.18
SRSF1-202ENST00000578430 CEP350Q5VT06 3117 aa16.16■□□□□ 0.18
SRSF1-202ENST00000578430 IDH1O75874 414 aaKnown RBP16.16■□□□□ 0.18
SRSF1-202ENST00000578430 ADD2P35612 726 aa16.16■□□□□ 0.18
SRSF1-202ENST00000578430 KIAA2012Q0VF49 1180 aa16.16■□□□□ 0.18
SRSF1-202ENST00000578430 APPBP2Q92624 585 aa16.16■□□□□ 0.18
SRSF1-202ENST00000578430 FAM227BQ96M60 508 aa16.16■□□□□ 0.18
SRSF1-202ENST00000578430 A0A0D9SFI3 127 aa16.15■□□□□ 0.18
SRSF1-202ENST00000578430 RIMBP2O15034 1052 aa16.15■□□□□ 0.18
SRSF1-202ENST00000578430 CHAF1AQ13111 956 aaPredicted RBP16.15■□□□□ 0.18
SRSF1-202ENST00000578430 SLC9C2Q5TAH2 1124 aa16.15■□□□□ 0.18
SRSF1-202ENST00000578430 SAMD1Q6SPF0 538 aaPredicted RBP16.15■□□□□ 0.18
SRSF1-202ENST00000578430 ERICH6Q7L0X2 663 aa16.15■□□□□ 0.18
SRSF1-202ENST00000578430 ABCF2Q9UG63 623 aa16.15■□□□□ 0.18
SRSF1-202ENST00000578430 GRIN3BO60391 1043 aa16.14■□□□□ 0.17
SRSF1-202ENST00000578430 PDE6AP16499 860 aa16.14■□□□□ 0.17
SRSF1-202ENST00000578430 TBC1D32Q96NH3 1257 aa16.14■□□□□ 0.17
SRSF1-202ENST00000578430 USP26Q9BXU7 913 aa16.14■□□□□ 0.17
SRSF1-202ENST00000578430 C22orf23Q9BZE7 217 aa16.14■□□□□ 0.17
SRSF1-202ENST00000578430 ANO2Q9NQ90 1003 aa16.14■□□□□ 0.17
SRSF1-202ENST00000578430 SUGT1Q9Y2Z0 365 aa16.14■□□□□ 0.17
SRSF1-202ENST00000578430 LTBP3Q9NS15 1303 aa16.14■□□□□ 0.17
SRSF1-202ENST00000578430 RBM25P49756 843 aaKnown RBP16.13■□□□□ 0.17
SRSF1-202ENST00000578430 FKBP1AP62942 108 aaKnown RBP16.13■□□□□ 0.17
SRSF1-202ENST00000578430 RAI14Q9P0K7 980 aa16.13■□□□□ 0.17
SRSF1-202ENST00000578430 BCS1LQ9Y276 419 aa16.13■□□□□ 0.17
SRSF1-202ENST00000578430 ARFGEF1Q9Y6D6 1849 aa16.12■□□□□ 0.17
SRSF1-202ENST00000578430 TCRBV5S4A2TA0A5A2 114 aa16.12■□□□□ 0.17
SRSF1-202ENST00000578430 PPIP5K2O43314 1243 aa16.12■□□□□ 0.17
SRSF1-202ENST00000578430 LDHBP07195 334 aaKnown RBP16.12■□□□□ 0.17
SRSF1-202ENST00000578430 MCCP23508 829 aa16.12■□□□□ 0.17
SRSF1-202ENST00000578430 MAGEB6Q8N7X4 407 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms