RNA–Protein interactions for RNA: ENST00000578199.5

ERBB2-205, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-205ENST00000578199 PRC1O43663 620 aa20.64■□□□□ 0.9
ERBB2-205ENST00000578199 TYRO3Q06418 890 aa20.64■□□□□ 0.9
ERBB2-205ENST00000578199 SALL1Q9NSC2 1324 aa20.64■□□□□ 0.89
ERBB2-205ENST00000578199 AKAP11Q9UKA4 1901 aa20.64■□□□□ 0.89
ERBB2-205ENST00000578199 CCDC102BQ68D86 513 aa20.64■□□□□ 0.89
ERBB2-205ENST00000578199 TTC12Q9H892 705 aaPredicted RBP20.64■□□□□ 0.89
ERBB2-205ENST00000578199 ZNF213O14771 459 aa20.63■□□□□ 0.89
ERBB2-205ENST00000578199 IL6STP40189 918 aaPredicted RBP20.63■□□□□ 0.89
ERBB2-205ENST00000578199 ANTXR2P58335 489 aa20.63■□□□□ 0.89
ERBB2-205ENST00000578199 HMGN5P82970 282 aaKnown RBP20.63■□□□□ 0.89
ERBB2-205ENST00000578199 LUZP1Q86V48 1076 aa20.63■□□□□ 0.89
ERBB2-205ENST00000578199 ADD2P35612 726 aa20.63■□□□□ 0.89
ERBB2-205ENST00000578199 SUSD4Q5VX71 490 aa20.63■□□□□ 0.89
ERBB2-205ENST00000578199 ZNF34Q8IZ26 560 aa20.63■□□□□ 0.89
ERBB2-205ENST00000578199 USP28Q96RU2 1077 aa20.63■□□□□ 0.89
ERBB2-205ENST00000578199 GJB4Q9NTQ9 266 aa20.63■□□□□ 0.89
ERBB2-205ENST00000578199 CFAP45Q9UL16 551 aa20.63■□□□□ 0.89
ERBB2-205ENST00000578199 SLIT2O94813 1529 aa20.62■□□□□ 0.89
ERBB2-205ENST00000578199 KLF18A0A0U1RQI7 1052 aa20.62■□□□□ 0.89
ERBB2-205ENST00000578199 APPP05067 770 aa20.62■□□□□ 0.89
ERBB2-205ENST00000578199 NAA16Q6N069 864 aaPredicted RBP20.62■□□□□ 0.89
ERBB2-205ENST00000578199 MB21D2Q8IYB1 491 aaPredicted RBP20.62■□□□□ 0.89
ERBB2-205ENST00000578199 SEC31BQ9NQW1 1179 aa20.62■□□□□ 0.89
ERBB2-205ENST00000578199 ILDR1Q86SU0 546 aaPredicted RBP20.62■□□□□ 0.89
ERBB2-205ENST00000578199 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.62■□□□□ 0.89
ERBB2-205ENST00000578199 NBPF3Q9H094 633 aa20.62■□□□□ 0.89
ERBB2-205ENST00000578199 TAOK2Q9UL54 1235 aa20.62■□□□□ 0.89
ERBB2-205ENST00000578199 WWC3Q9ULE0 1092 aa20.62■□□□□ 0.89
ERBB2-205ENST00000578199 R3HCC1Q9Y3T6 440 aaKnown RBP20.62■□□□□ 0.89
ERBB2-205ENST00000578199 MYH3P11055 1940 aa20.62■□□□□ 0.89
ERBB2-205ENST00000578199 ANO6Q4KMQ2 910 aa20.61■□□□□ 0.89
ERBB2-205ENST00000578199 CLSTN2Q9H4D0 955 aa20.61■□□□□ 0.89
ERBB2-205ENST00000578199 ZNF532Q9HCE3 1301 aa20.61■□□□□ 0.89
ERBB2-205ENST00000578199 CARMIL3Q8ND23 1372 aa20.61■□□□□ 0.89
ERBB2-205ENST00000578199 COL14A1Q05707 1796 aaKnown RBP20.61■□□□□ 0.89
ERBB2-205ENST00000578199 ERVV-1B6SEH8 477 aa20.61■□□□□ 0.89
ERBB2-205ENST00000578199 MCM5P33992 734 aa20.61■□□□□ 0.89
ERBB2-205ENST00000578199 INTS5Q6P9B9 1019 aaKnown RBP20.61■□□□□ 0.89
ERBB2-205ENST00000578199 NCOA7Q8NI08 942 aa20.61■□□□□ 0.89
ERBB2-205ENST00000578199 ATP6V1AP38606 617 aa20.6■□□□□ 0.89
ERBB2-205ENST00000578199 ANKRD36CQ5JPF3 1778 aa20.6■□□□□ 0.89
ERBB2-205ENST00000578199 INCENPQ9NQS7 918 aa20.6■□□□□ 0.89
ERBB2-205ENST00000578199 DDX19AQ9NUU7 478 aaKnown RBP20.6■□□□□ 0.89
ERBB2-205ENST00000578199 HPS5Q9UPZ3 1129 aa20.6■□□□□ 0.89
ERBB2-205ENST00000578199 MYH7P12883 1935 aa20.6■□□□□ 0.89
ERBB2-205ENST00000578199 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.6■□□□□ 0.89
ERBB2-205ENST00000578199 RALYLQ86SE5 291 aaKnown RBP20.6■□□□□ 0.89
ERBB2-205ENST00000578199 C17orf53Q8N3J3 647 aaPredicted RBP20.6■□□□□ 0.89
ERBB2-205ENST00000578199 SPC24Q8NBT2 197 aa20.6■□□□□ 0.89
ERBB2-205ENST00000578199 GOLGA8BA8MQT2 603 aa20.59■□□□□ 0.89
ERBB2-205ENST00000578199 EIF5P55010 431 aaKnown RBP20.59■□□□□ 0.89
ERBB2-205ENST00000578199 EVCP57679 992 aa20.59■□□□□ 0.89
ERBB2-205ENST00000578199 TBC1D10CQ8IV04 446 aa20.59■□□□□ 0.89
ERBB2-205ENST00000578199 FAM200AQ8TCP9 573 aa20.59■□□□□ 0.89
ERBB2-205ENST00000578199 GOLPH3LQ9H4A5 285 aa20.59■□□□□ 0.89
ERBB2-205ENST00000578199 COL16A1Q07092 1604 aaPredicted RBP20.58■□□□□ 0.89
ERBB2-205ENST00000578199 RXRAP19793 462 aa20.58■□□□□ 0.89
ERBB2-205ENST00000578199 CRKLP46109 303 aaKnown RBP20.58■□□□□ 0.89
ERBB2-205ENST00000578199 DDB1Q16531 1140 aa20.58■□□□□ 0.89
ERBB2-205ENST00000578199 CCAR1Q8IX12 1150 aaKnown RBP20.58■□□□□ 0.89
ERBB2-205ENST00000578199 RCOR1Q9UKL0 485 aa20.58■□□□□ 0.89
ERBB2-205ENST00000578199 POLR3DP05423 398 aaPredicted RBP20.58■□□□□ 0.88
ERBB2-205ENST00000578199 PDE6AP16499 860 aa20.58■□□□□ 0.88
ERBB2-205ENST00000578199 CYB5R4Q7L1T6 521 aa20.58■□□□□ 0.88
ERBB2-205ENST00000578199 CBX8Q9HC52 389 aa20.58■□□□□ 0.88
ERBB2-205ENST00000578199 KIF3AQ9Y496 699 aa20.58■□□□□ 0.88
ERBB2-205ENST00000578199 DOT1LQ8TEK3 1739 aa20.58■□□□□ 0.88
ERBB2-205ENST00000578199 PUM3Q15397 648 aaKnown RBP20.57■□□□□ 0.88
ERBB2-205ENST00000578199 FBXL16Q8N461 479 aa20.57■□□□□ 0.88
ERBB2-205ENST00000578199 ROBO1Q9Y6N7 1651 aa20.57■□□□□ 0.88
ERBB2-205ENST00000578199 ABCC12Q96J65 1359 aa20.57■□□□□ 0.88
ERBB2-205ENST00000578199 A0A087WWV3 80 aa20.57■□□□□ 0.88
ERBB2-205ENST00000578199 ITPK1Q13572 414 aa20.57■□□□□ 0.88
ERBB2-205ENST00000578199 TTF1Q15361 905 aaPredicted RBP20.57■□□□□ 0.88
ERBB2-205ENST00000578199 ZSCAN25Q6NSZ9 544 aa20.57■□□□□ 0.88
ERBB2-205ENST00000578199 LPIN2Q92539 896 aa20.57■□□□□ 0.88
ERBB2-205ENST00000578199 ZNF512BQ96KM6 892 aaPredicted RBP20.57■□□□□ 0.88
ERBB2-205ENST00000578199 DNAJC25Q9H1X3 360 aa20.57■□□□□ 0.88
ERBB2-205ENST00000578199 SENP2Q9HC62 589 aa20.57■□□□□ 0.88
ERBB2-205ENST00000578199 CCDC87Q9NVE4 849 aa20.57■□□□□ 0.88
ERBB2-205ENST00000578199 FGFR2P21802 821 aa20.56■□□□□ 0.88
ERBB2-205ENST00000578199 ARID4AP29374 1257 aaPredicted RBP20.56■□□□□ 0.88
ERBB2-205ENST00000578199 RBM43Q6ZSC3 357 aaKnown RBP20.56■□□□□ 0.88
ERBB2-205ENST00000578199 MARCH10Q8NA82 808 aaPredicted RBP20.56■□□□□ 0.88
ERBB2-205ENST00000578199 KIAA2012Q0VF49 1180 aa20.56■□□□□ 0.88
ERBB2-205ENST00000578199 SASS6Q6UVJ0 657 aa20.56■□□□□ 0.88
ERBB2-205ENST00000578199 MPHOSPH8Q99549 860 aa20.56■□□□□ 0.88
ERBB2-205ENST00000578199 MYH15Q9Y2K3 1946 aa20.56■□□□□ 0.88
ERBB2-205ENST00000578199 TCRBV5S4A2TA0A5A2 114 aa20.55■□□□□ 0.88
ERBB2-205ENST00000578199 NUTM2BA6NNL0 878 aaPredicted RBP20.55■□□□□ 0.88
ERBB2-205ENST00000578199 NUTM2EB1AL46 878 aaPredicted RBP20.55■□□□□ 0.88
ERBB2-205ENST00000578199 ME1P48163 572 aa20.55■□□□□ 0.88
ERBB2-205ENST00000578199 RASGRF1Q13972 1273 aa20.55■□□□□ 0.88
ERBB2-205ENST00000578199 NUTM2AQ8IVF1 878 aaPredicted RBP20.55■□□□□ 0.88
ERBB2-205ENST00000578199 ERCC4Q92889 916 aaPredicted RBP20.55■□□□□ 0.88
ERBB2-205ENST00000578199 ORC3Q9UBD5 711 aaPredicted RBP20.55■□□□□ 0.88
ERBB2-205ENST00000578199 B4E1Z4 1266 aa20.55■□□□□ 0.88
ERBB2-205ENST00000578199 UBE3CQ15386 1083 aa20.55■□□□□ 0.88
ERBB2-205ENST00000578199 SPATA5Q8NB90 893 aa20.55■□□□□ 0.88
ERBB2-205ENST00000578199 C8orf76Q96K31 380 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms