RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 FKBP1BP68106 108 aa16■□□□□ 0.15
CCDC57-211ENST00000578187 DACT2Q5SW24 774 aa16■□□□□ 0.15
CCDC57-211ENST00000578187 TTLL5Q6EMB2 1281 aa16■□□□□ 0.15
CCDC57-211ENST00000578187 CLUAP1Q96AJ1 413 aa16■□□□□ 0.15
CCDC57-211ENST00000578187 MEIS3Q99687 375 aa16■□□□□ 0.15
CCDC57-211ENST00000578187 POLR2AP24928 1970 aaKnown RBP15.99■□□□□ 0.15
CCDC57-211ENST00000578187 NF2P35240 595 aa15.99■□□□□ 0.15
CCDC57-211ENST00000578187 DLK2Q6UY11 383 aa15.99■□□□□ 0.15
CCDC57-211ENST00000578187 ZNF804AQ7Z570 1209 aa15.99■□□□□ 0.15
CCDC57-211ENST00000578187 TMEM57Q8N5G2 664 aa15.99■□□□□ 0.15
CCDC57-211ENST00000578187 RCAN3Q9UKA8 241 aa15.99■□□□□ 0.15
CCDC57-211ENST00000578187 ASTN2O75129 1339 aaPredicted RBP15.98■□□□□ 0.15
CCDC57-211ENST00000578187 WTIPA6NIX2 430 aaPredicted RBP15.98■□□□□ 0.15
CCDC57-211ENST00000578187 REM2Q8IYK8 340 aaPredicted RBP15.98■□□□□ 0.15
CCDC57-211ENST00000578187 ZNF594Q96JF6 807 aaPredicted RBP15.98■□□□□ 0.15
CCDC57-211ENST00000578187 CNNM1Q9NRU3 951 aa15.98■□□□□ 0.15
CCDC57-211ENST00000578187 TSKSQ9UJT2 592 aa15.98■□□□□ 0.15
CCDC57-211ENST00000578187 HDAC5Q9UQL6 1122 aa15.98■□□□□ 0.15
CCDC57-211ENST00000578187 PAPPA2Q9BXP8 1791 aa15.98■□□□□ 0.15
CCDC57-211ENST00000578187 GNAI3P08754 354 aa15.97■□□□□ 0.15
CCDC57-211ENST00000578187 RLBP1P12271 317 aa15.97■□□□□ 0.15
CCDC57-211ENST00000578187 GTF2IP78347 998 aa15.97■□□□□ 0.15
CCDC57-211ENST00000578187 LDHAL6AQ6ZMR3 332 aa15.97■□□□□ 0.15
CCDC57-211ENST00000578187 TXNRD3Q86VQ6 643 aa15.97■□□□□ 0.15
CCDC57-211ENST00000578187 FTSJ3Q8IY81 847 aaKnown RBP15.97■□□□□ 0.15
CCDC57-211ENST00000578187 DZIP1LQ8IYY4 767 aaKnown RBP15.97■□□□□ 0.15
CCDC57-211ENST00000578187 TTLL12Q14166 644 aaPredicted RBP15.96■□□□□ 0.15
CCDC57-211ENST00000578187 NBPF9Q3BBW0 867 aa15.96■□□□□ 0.15
CCDC57-211ENST00000578187 APOBEC3FQ8IUX4 373 aaKnown RBP15.96■□□□□ 0.15
CCDC57-211ENST00000578187 KIAA0825Q8IV33 1275 aa15.96■□□□□ 0.15
CCDC57-211ENST00000578187 ABHD8Q96I13 439 aa15.96■□□□□ 0.15
CCDC57-211ENST00000578187 YTHDC1Q96MU7 727 aaKnown RBP15.96■□□□□ 0.15
CCDC57-211ENST00000578187 MXD3Q9BW11 206 aa15.96■□□□□ 0.15
CCDC57-211ENST00000578187 CD209Q9NNX6 404 aa15.96■□□□□ 0.15
CCDC57-211ENST00000578187 SAGE1Q9NXZ1 904 aa15.96■□□□□ 0.15
CCDC57-211ENST00000578187 LRRFIP2Q9Y608 721 aaKnown RBP15.96■□□□□ 0.15
CCDC57-211ENST00000578187 FAM155AB1AL88 458 aaPredicted RBP15.95■□□□□ 0.14
CCDC57-211ENST00000578187 WNT10BO00744 389 aa15.95■□□□□ 0.14
CCDC57-211ENST00000578187 TAF5LO75529 589 aa15.95■□□□□ 0.14
CCDC57-211ENST00000578187 SLC10A3P09131 477 aa15.95■□□□□ 0.14
CCDC57-211ENST00000578187 KLRK1P26718 216 aa15.95■□□□□ 0.14
CCDC57-211ENST00000578187 RFX5P48382 616 aaPredicted RBP15.95■□□□□ 0.14
CCDC57-211ENST00000578187 C15orf52Q6ZUT6 534 aaKnown RBP15.95■□□□□ 0.14
CCDC57-211ENST00000578187 MYO1BO43795 1136 aa15.94■□□□□ 0.14
CCDC57-211ENST00000578187 PLIN1O60240 522 aa15.94■□□□□ 0.14
CCDC57-211ENST00000578187 KIF23Q02241 960 aaPredicted RBP15.94■□□□□ 0.14
CCDC57-211ENST00000578187 HELBQ8NG08 1087 aaPredicted RBP15.94■□□□□ 0.14
CCDC57-211ENST00000578187 IRS2Q9Y4H2 1338 aa15.94■□□□□ 0.14
CCDC57-211ENST00000578187 SASH1O94885 1247 aa15.93■□□□□ 0.14
CCDC57-211ENST00000578187 MTX1Q13505 466 aa15.93■□□□□ 0.14
CCDC57-211ENST00000578187 DLGAP5Q15398 846 aa15.93■□□□□ 0.14
CCDC57-211ENST00000578187 PUS3Q9BZE2 481 aaKnown RBP15.93■□□□□ 0.14
CCDC57-211ENST00000578187 RIPOR2Q9Y4F9 1068 aa15.93■□□□□ 0.14
CCDC57-211ENST00000578187 ARAP2Q8WZ64 1704 aa15.93■□□□□ 0.14
CCDC57-211ENST00000578187 COL1A1P02452 1464 aaPredicted RBP15.92■□□□□ 0.14
CCDC57-211ENST00000578187 GNAI2P04899 355 aa15.92■□□□□ 0.14
CCDC57-211ENST00000578187 MS4A1P11836 297 aa15.92■□□□□ 0.14
CCDC57-211ENST00000578187 PTPN12Q05209 780 aaKnown RBP15.92■□□□□ 0.14
CCDC57-211ENST00000578187 ARMC9Q7Z3E5 817 aa15.92■□□□□ 0.14
CCDC57-211ENST00000578187 RASAL3Q86YV0 1011 aa15.92■□□□□ 0.14
CCDC57-211ENST00000578187 ITPRIPQ8IWB1 547 aa15.92■□□□□ 0.14
CCDC57-211ENST00000578187 KLHDC4Q8TBB5 520 aa15.92■□□□□ 0.14
CCDC57-211ENST00000578187 PANK1Q8TE04 598 aa15.92■□□□□ 0.14
CCDC57-211ENST00000578187 MROH5Q6ZUA9 1318 aa15.92■□□□□ 0.14
CCDC57-211ENST00000578187 IL1R1P14778 569 aa15.91■□□□□ 0.14
CCDC57-211ENST00000578187 FKBP1AP62942 108 aaKnown RBP15.91■□□□□ 0.14
CCDC57-211ENST00000578187 LRRC24Q50LG9 513 aa15.91■□□□□ 0.14
CCDC57-211ENST00000578187 ZIC5Q96T25 663 aa15.91■□□□□ 0.14
CCDC57-211ENST00000578187 SCAF8Q9UPN6 1271 aaKnown RBP15.91■□□□□ 0.14
CCDC57-211ENST00000578187 AKAP11Q9UKA4 1901 aa15.91■□□□□ 0.14
CCDC57-211ENST00000578187 MYH13Q9UKX3 1938 aa15.9■□□□□ 0.14
CCDC57-211ENST00000578187 CCDC85CA6NKD9 419 aa15.9■□□□□ 0.14
CCDC57-211ENST00000578187 EYA2O00167 538 aa15.9■□□□□ 0.14
CCDC57-211ENST00000578187 ZBTB7BO15156 539 aaPredicted RBP15.9■□□□□ 0.14
CCDC57-211ENST00000578187 TRPA1O75762 1119 aa15.9■□□□□ 0.14
CCDC57-211ENST00000578187 CACNB1Q02641 598 aaPredicted RBP15.9■□□□□ 0.14
CCDC57-211ENST00000578187 UBE4AQ14139 1066 aa15.9■□□□□ 0.14
CCDC57-211ENST00000578187 VPS37DQ86XT2 251 aa15.9■□□□□ 0.14
CCDC57-211ENST00000578187 VGLL2Q8N8G2 317 aa15.9■□□□□ 0.14
CCDC57-211ENST00000578187 RNF186Q9NXI6 227 aa15.9■□□□□ 0.14
CCDC57-211ENST00000578187 FBXO3Q9UK99 471 aa15.9■□□□□ 0.14
CCDC57-211ENST00000578187 PPP2R3BQ9Y5P8 575 aa15.9■□□□□ 0.14
CCDC57-211ENST00000578187 F8W031 263 aaPredicted RBP15.89■□□□□ 0.13
CCDC57-211ENST00000578187 UBE2Q2LH0YL09 131 aa15.89■□□□□ 0.13
CCDC57-211ENST00000578187 SNAP23O00161 211 aa15.89■□□□□ 0.13
CCDC57-211ENST00000578187 RBM5P52756 815 aaKnown RBP eCLIP15.89■□□□□ 0.13
CCDC57-211ENST00000578187 DGKZQ13574 1117 aa15.89■□□□□ 0.13
CCDC57-211ENST00000578187 PRAMEF18Q5VWM3 479 aa15.89■□□□□ 0.13
CCDC57-211ENST00000578187 MTMR14Q8NCE2 650 aa15.89■□□□□ 0.13
CCDC57-211ENST00000578187 CSRNP1Q96S65 589 aa15.89■□□□□ 0.13
CCDC57-211ENST00000578187 COPRSQ9NQ92 184 aa15.89■□□□□ 0.13
CCDC57-211ENST00000578187 SRGAP3O43295 1099 aa15.88■□□□□ 0.13
CCDC57-211ENST00000578187 CIAO1O76071 339 aa15.88■□□□□ 0.13
CCDC57-211ENST00000578187 HIBADHP31937 336 aaKnown RBP15.88■□□□□ 0.13
CCDC57-211ENST00000578187 MVPQ14764 893 aaKnown RBP15.88■□□□□ 0.13
CCDC57-211ENST00000578187 METTL24Q5JXM2 366 aa15.88■□□□□ 0.13
CCDC57-211ENST00000578187 ATG9AQ7Z3C6 839 aa15.88■□□□□ 0.13
CCDC57-211ENST00000578187 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.88■□□□□ 0.13
CCDC57-211ENST00000578187 MCOLN1Q9GZU1 580 aa15.88■□□□□ 0.13
CCDC57-211ENST00000578187 ECM29Q5VYK3 1845 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms