RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 SASH1O94885 1247 aa12.38□□□□□ -0.43
CRLF3-202ENST00000577725 GTF2E1P29083 439 aaPredicted RBP12.38□□□□□ -0.43
CRLF3-202ENST00000577725 GMPSP49915 693 aaPredicted RBP12.38□□□□□ -0.43
CRLF3-202ENST00000577725 GRIPAP1Q4V328 841 aa12.38□□□□□ -0.43
CRLF3-202ENST00000577725 LRRC24Q50LG9 513 aa12.38□□□□□ -0.43
CRLF3-202ENST00000577725 TSHZ3Q63HK5 1081 aa12.38□□□□□ -0.43
CRLF3-202ENST00000577725 CHRDL2Q6WN34 429 aa12.38□□□□□ -0.43
CRLF3-202ENST00000577725 PLEKHM2Q8IWE5 1019 aa12.38□□□□□ -0.43
CRLF3-202ENST00000577725 KIF1BPQ96EK5 621 aa12.38□□□□□ -0.43
CRLF3-202ENST00000577725 PUS3Q9BZE2 481 aaKnown RBP12.38□□□□□ -0.43
CRLF3-202ENST00000577725 COPRSQ9NQ92 184 aa12.38□□□□□ -0.43
CRLF3-202ENST00000577725 COL4A1P02462 1669 aa12.38□□□□□ -0.43
CRLF3-202ENST00000577725 EN2P19622 333 aaPredicted RBP12.37□□□□□ -0.43
CRLF3-202ENST00000577725 ITGA6P23229 1130 aa12.37□□□□□ -0.43
CRLF3-202ENST00000577725 CCDC57Q2TAC2 916 aa12.37□□□□□ -0.43
CRLF3-202ENST00000577725 HSP90AB4PQ58FF6 505 aa12.37□□□□□ -0.43
CRLF3-202ENST00000577725 TAF7LQ5H9L4 462 aa12.37□□□□□ -0.43
CRLF3-202ENST00000577725 SEC31BQ9NQW1 1179 aa12.37□□□□□ -0.43
CRLF3-202ENST00000577725 TAF1P21675 1872 aa12.36□□□□□ -0.43
CRLF3-202ENST00000577725 TFCP2Q12800 502 aa12.36□□□□□ -0.43
CRLF3-202ENST00000577725 IFIT5Q13325 482 aaKnown RBP12.36□□□□□ -0.43
CRLF3-202ENST00000577725 DLK2Q6UY11 383 aa12.36□□□□□ -0.43
CRLF3-202ENST00000577725 ERC1Q8IUD2 1116 aa12.36□□□□□ -0.43
CRLF3-202ENST00000577725 TRPM4Q8TD43 1214 aa12.36□□□□□ -0.43
CRLF3-202ENST00000577725 COL25A1Q9BXS0 654 aaPredicted RBP12.36□□□□□ -0.43
CRLF3-202ENST00000577725 NYXQ9GZU5 481 aa12.36□□□□□ -0.43
CRLF3-202ENST00000577725 RBM27Q9P2N5 1060 aaKnown RBP12.36□□□□□ -0.43
CRLF3-202ENST00000577725 AKAP11Q9UKA4 1901 aa12.36□□□□□ -0.43
CRLF3-202ENST00000577725 BRCA2P51587 3418 aa12.35□□□□□ -0.43
CRLF3-202ENST00000577725 ANKRD18BA2A2Z9 1011 aa12.35□□□□□ -0.43
CRLF3-202ENST00000577725 EYA2O00167 538 aa12.35□□□□□ -0.43
CRLF3-202ENST00000577725 FKTNO75072 461 aa12.35□□□□□ -0.43
CRLF3-202ENST00000577725 CXCL9Q07325 125 aa12.35□□□□□ -0.43
CRLF3-202ENST00000577725 ATG9AQ7Z3C6 839 aa12.35□□□□□ -0.43
CRLF3-202ENST00000577725 KRT26Q7Z3Y9 468 aa12.35□□□□□ -0.43
CRLF3-202ENST00000577725 AACSQ86V21 672 aa12.35□□□□□ -0.43
CRLF3-202ENST00000577725 RASAL3Q86YV0 1011 aa12.35□□□□□ -0.43
CRLF3-202ENST00000577725 TSHZ2Q9NRE2 1034 aa12.35□□□□□ -0.43
CRLF3-202ENST00000577725 SALL3Q9BXA9 1300 aa12.35□□□□□ -0.43
CRLF3-202ENST00000577725 PPIP5K2O43314 1243 aa12.34□□□□□ -0.43
CRLF3-202ENST00000577725 CCDC152Q4G0S7 254 aa12.34□□□□□ -0.43
CRLF3-202ENST00000577725 TPTE2Q6XPS3 522 aa12.34□□□□□ -0.43
CRLF3-202ENST00000577725 CCDC8Q9H0W5 538 aaPredicted RBP12.34□□□□□ -0.43
CRLF3-202ENST00000577725 TLR7Q9NYK1 1049 aaKnown RBP12.34□□□□□ -0.43
CRLF3-202ENST00000577725 FBXO3Q9UK99 471 aa12.34□□□□□ -0.43
CRLF3-202ENST00000577725 ZNRF3Q9ULT6 936 aa12.34□□□□□ -0.43
CRLF3-202ENST00000577725 GSPT1P15170 499 aaKnown RBP12.33□□□□□ -0.44
CRLF3-202ENST00000577725 MX1P20591 662 aa12.33□□□□□ -0.44
CRLF3-202ENST00000577725 PDE1AP54750 535 aa12.33□□□□□ -0.44
CRLF3-202ENST00000577725 SLC10A5Q5PT55 438 aa12.33□□□□□ -0.44
CRLF3-202ENST00000577725 TTC22Q5TAA0 569 aa12.33□□□□□ -0.44
CRLF3-202ENST00000577725 EAF2Q96CJ1 260 aaPredicted RBP12.33□□□□□ -0.44
CRLF3-202ENST00000577725 VPS33BQ9H267 617 aa12.33□□□□□ -0.44
CRLF3-202ENST00000577725 HTTP42858 3142 aa12.33□□□□□ -0.44
CRLF3-202ENST00000577725 RIC1Q4ADV7 1423 aa12.33□□□□□ -0.44
CRLF3-202ENST00000577725 TRIOBPQ9H2D6 2365 aa12.33□□□□□ -0.44
CRLF3-202ENST00000577725 H7C1D1 291 aa12.32□□□□□ -0.44
CRLF3-202ENST00000577725 CIAO1O76071 339 aa12.32□□□□□ -0.44
CRLF3-202ENST00000577725 IFIT2P09913 472 aaKnown RBP12.32□□□□□ -0.44
CRLF3-202ENST00000577725 IL15P40933 162 aaPredicted RBP12.32□□□□□ -0.44
CRLF3-202ENST00000577725 C8orf34Q49A92 452 aa12.32□□□□□ -0.44
CRLF3-202ENST00000577725 TPRNQ4KMQ1 711 aa12.32□□□□□ -0.44
CRLF3-202ENST00000577725 TNNI3KQ59H18 835 aa12.32□□□□□ -0.44
CRLF3-202ENST00000577725 CLASRPQ8N2M8 674 aaKnown RBP12.32□□□□□ -0.44
CRLF3-202ENST00000577725 CNNM1Q9NRU3 951 aa12.32□□□□□ -0.44
CRLF3-202ENST00000577725 CNOT7Q9UIV1 285 aaKnown RBP12.32□□□□□ -0.44
CRLF3-202ENST00000577725 FPGT-TNNI3KV9GXZ4 949 aa12.32□□□□□ -0.44
CRLF3-202ENST00000577725 RANBP2P49792 3224 aaKnown RBP12.32□□□□□ -0.44
CRLF3-202ENST00000577725 ZNF609O15014 1411 aa12.31□□□□□ -0.44
CRLF3-202ENST00000577725 ADM5C9JUS6 153 aa12.31□□□□□ -0.44
CRLF3-202ENST00000577725 MAP4K4O95819 1239 aaPredicted RBP12.31□□□□□ -0.44
CRLF3-202ENST00000577725 HSP90B1P14625 803 aaKnown RBP12.31□□□□□ -0.44
CRLF3-202ENST00000577725 TNIP1Q15025 636 aa12.31□□□□□ -0.44
CRLF3-202ENST00000577725 SF3B3Q15393 1217 aaKnown RBP12.31□□□□□ -0.44
CRLF3-202ENST00000577725 AOC3Q16853 763 aa12.31□□□□□ -0.44
CRLF3-202ENST00000577725 METTL24Q5JXM2 366 aa12.31□□□□□ -0.44
CRLF3-202ENST00000577725 LDHAL6AQ6ZMR3 332 aa12.31□□□□□ -0.44
CRLF3-202ENST00000577725 HELBQ8NG08 1087 aaPredicted RBP12.31□□□□□ -0.44
CRLF3-202ENST00000577725 NLRP3Q96P20 1036 aa12.31□□□□□ -0.44
CRLF3-202ENST00000577725 CFHR5Q9BXR6 569 aa12.31□□□□□ -0.44
CRLF3-202ENST00000577725 TRIM17Q9Y577 477 aa12.31□□□□□ -0.44
CRLF3-202ENST00000577725 RTL9Q8NET4 1388 aa12.3□□□□□ -0.44
CRLF3-202ENST00000577725 RBBP6Q7Z6E9 1792 aaKnown RBP12.3□□□□□ -0.44
CRLF3-202ENST00000577725 PAPPA2Q9BXP8 1791 aa12.3□□□□□ -0.44
CRLF3-202ENST00000577725 CRY2Q49AN0 593 aa12.3□□□□□ -0.44
CRLF3-202ENST00000577725 SLC51AQ86UW1 340 aa12.3□□□□□ -0.44
CRLF3-202ENST00000577725 CELF1Q92879 486 aaKnown RBP12.3□□□□□ -0.44
CRLF3-202ENST00000577725 ARMC5Q96C12 935 aa12.3□□□□□ -0.44
CRLF3-202ENST00000577725 DCPSQ96C86 337 aaKnown RBP12.3□□□□□ -0.44
CRLF3-202ENST00000577725 DBNDD2Q9BQY9 259 aa12.3□□□□□ -0.44
CRLF3-202ENST00000577725 TMEM106CQ9BVX2 250 aa12.3□□□□□ -0.44
CRLF3-202ENST00000577725 BACH2Q9BYV9 841 aa12.3□□□□□ -0.44
CRLF3-202ENST00000577725 CEP126Q9P2H0 1117 aa12.3□□□□□ -0.44
CRLF3-202ENST00000577725 STAP2Q9UGK3 403 aa12.3□□□□□ -0.44
CRLF3-202ENST00000577725 RIPOR2Q9Y4F9 1068 aa12.3□□□□□ -0.44
CRLF3-202ENST00000577725 CENPFP49454 3210 aa12.3□□□□□ -0.44
CRLF3-202ENST00000577725 ADORA1P30542 326 aa12.29□□□□□ -0.44
CRLF3-202ENST00000577725 IGHMBP2P38935 993 aaKnown RBP12.29□□□□□ -0.44
CRLF3-202ENST00000577725 TM4SF4P48230 202 aa12.29□□□□□ -0.44
CRLF3-202ENST00000577725 TIMM10P62072 90 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms