RNA–Protein interactions for RNA: ENST00000577664.5

CDK5RAP3-204, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 568 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-204ENST00000577664 EXOC6BQ9Y2D4 811 aa13.74□□□□□ -0.21
CDK5RAP3-204ENST00000577664 COL4A1P02462 1669 aa13.74□□□□□ -0.21
CDK5RAP3-204ENST00000577664 MNX1P50219 401 aaPredicted RBP13.73□□□□□ -0.21
CDK5RAP3-204ENST00000577664 RGMBQ6NW40 437 aa13.73□□□□□ -0.21
CDK5RAP3-204ENST00000577664 OLFM4Q6UX06 510 aa13.73□□□□□ -0.21
CDK5RAP3-204ENST00000577664 LRRCC1Q9C099 1032 aa13.73□□□□□ -0.21
CDK5RAP3-204ENST00000577664 ANKRD2Q9GZV1 360 aa13.73□□□□□ -0.21
CDK5RAP3-204ENST00000577664 CNNM1Q9NRU3 951 aa13.73□□□□□ -0.21
CDK5RAP3-204ENST00000577664 CEP126Q9P2H0 1117 aa13.73□□□□□ -0.21
CDK5RAP3-204ENST00000577664 TAF1P21675 1872 aa13.72□□□□□ -0.21
CDK5RAP3-204ENST00000577664 FGFR2P21802 821 aa13.72□□□□□ -0.21
CDK5RAP3-204ENST00000577664 CHRNDQ07001 517 aa13.72□□□□□ -0.21
CDK5RAP3-204ENST00000577664 FBXO46Q6PJ61 603 aaPredicted RBP13.72□□□□□ -0.21
CDK5RAP3-204ENST00000577664 CDC37L1Q7L3B6 337 aa13.72□□□□□ -0.21
CDK5RAP3-204ENST00000577664 CSRNP1Q96S65 589 aa13.72□□□□□ -0.21
CDK5RAP3-204ENST00000577664 GPRC5DQ9NZD1 345 aa13.72□□□□□ -0.21
CDK5RAP3-204ENST00000577664 UBE4AQ14139 1066 aa13.71□□□□□ -0.21
CDK5RAP3-204ENST00000577664 C15orf52Q6ZUT6 534 aaKnown RBP13.71□□□□□ -0.21
CDK5RAP3-204ENST00000577664 CHD1LQ86WJ1 897 aa13.71□□□□□ -0.21
CDK5RAP3-204ENST00000577664 REM2Q8IYK8 340 aaPredicted RBP13.71□□□□□ -0.21
CDK5RAP3-204ENST00000577664 SIL1Q9H173 461 aa13.71□□□□□ -0.21
CDK5RAP3-204ENST00000577664 AKAP2Q9Y2D5 859 aa13.71□□□□□ -0.21
CDK5RAP3-204ENST00000577664 LEMD3Q9Y2U8 911 aa13.71□□□□□ -0.21
CDK5RAP3-204ENST00000577664 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.71□□□□□ -0.21
CDK5RAP3-204ENST00000577664 RBBP6Q7Z6E9 1792 aaKnown RBP13.71□□□□□ -0.22
CDK5RAP3-204ENST00000577664 LRRC37AA6NMS7 1700 aa13.7□□□□□ -0.22
CDK5RAP3-204ENST00000577664 BRCA2P51587 3418 aa13.7□□□□□ -0.22
CDK5RAP3-204ENST00000577664 PPEF1O14829 653 aaPredicted RBP13.7□□□□□ -0.22
CDK5RAP3-204ENST00000577664 TFCP2Q12800 502 aa13.7□□□□□ -0.22
CDK5RAP3-204ENST00000577664 NOM1Q5C9Z4 860 aaKnown RBP13.7□□□□□ -0.22
CDK5RAP3-204ENST00000577664 ANKRD45Q5TZF3 282 aa13.7□□□□□ -0.22
CDK5RAP3-204ENST00000577664 CLASRPQ8N2M8 674 aaKnown RBP13.7□□□□□ -0.22
CDK5RAP3-204ENST00000577664 RTFDC1Q9BY42 306 aaPredicted RBP13.7□□□□□ -0.22
CDK5RAP3-204ENST00000577664 HTTP42858 3142 aa13.7□□□□□ -0.22
CDK5RAP3-204ENST00000577664 SALL3Q9BXA9 1300 aa13.69□□□□□ -0.22
CDK5RAP3-204ENST00000577664 IRS2Q9Y4H2 1338 aa13.69□□□□□ -0.22
CDK5RAP3-204ENST00000577664 TNNI3KQ59H18 835 aa13.69□□□□□ -0.22
CDK5RAP3-204ENST00000577664 METTL24Q5JXM2 366 aa13.69□□□□□ -0.22
CDK5RAP3-204ENST00000577664 LPIN2Q92539 896 aa13.69□□□□□ -0.22
CDK5RAP3-204ENST00000577664 EAF2Q96CJ1 260 aaPredicted RBP13.69□□□□□ -0.22
CDK5RAP3-204ENST00000577664 VPS33BQ9H267 617 aa13.69□□□□□ -0.22
CDK5RAP3-204ENST00000577664 OSBPL3Q9H4L5 887 aa13.69□□□□□ -0.22
CDK5RAP3-204ENST00000577664 ZNF408Q9H9D4 720 aa13.69□□□□□ -0.22
CDK5RAP3-204ENST00000577664 FPGT-TNNI3KV9GXZ4 949 aa13.69□□□□□ -0.22
CDK5RAP3-204ENST00000577664 XDHP47989 1333 aa13.68□□□□□ -0.22
CDK5RAP3-204ENST00000577664 SLC10A3P09131 477 aa13.68□□□□□ -0.22
CDK5RAP3-204ENST00000577664 ATP2B4P23634 1241 aa13.68□□□□□ -0.22
CDK5RAP3-204ENST00000577664 OS9Q13438 667 aaPredicted RBP13.68□□□□□ -0.22
CDK5RAP3-204ENST00000577664 PUM3Q15397 648 aaKnown RBP13.68□□□□□ -0.22
CDK5RAP3-204ENST00000577664 ZNF296Q8WUU4 475 aaPredicted RBP13.68□□□□□ -0.22
CDK5RAP3-204ENST00000577664 STAP2Q9UGK3 403 aa13.68□□□□□ -0.22
CDK5RAP3-204ENST00000577664 HDAC9Q9UKV0 1011 aa13.68□□□□□ -0.22
CDK5RAP3-204ENST00000577664 RANBP2P49792 3224 aaKnown RBP13.68□□□□□ -0.22
CDK5RAP3-204ENST00000577664 HIRAP54198 1017 aaPredicted RBP13.67□□□□□ -0.22
CDK5RAP3-204ENST00000577664 GPSM2P81274 684 aa13.67□□□□□ -0.22
CDK5RAP3-204ENST00000577664 OTUD5Q96G74 571 aa13.67□□□□□ -0.22
CDK5RAP3-204ENST00000577664 ZNF512BQ96KM6 892 aaPredicted RBP13.67□□□□□ -0.22
CDK5RAP3-204ENST00000577664 TMX4Q9H1E5 349 aaPredicted RBP13.67□□□□□ -0.22
CDK5RAP3-204ENST00000577664 A0A1B0GUL7 405 aa13.66□□□□□ -0.22
CDK5RAP3-204ENST00000577664 POTEFA5A3E0 1075 aa13.66□□□□□ -0.22
CDK5RAP3-204ENST00000577664 TIMM10P62072 90 aa13.66□□□□□ -0.22
CDK5RAP3-204ENST00000577664 MPNDQ8N594 471 aa13.66□□□□□ -0.22
CDK5RAP3-204ENST00000577664 TBC1D16Q8TBP0 767 aa13.66□□□□□ -0.22
CDK5RAP3-204ENST00000577664 GBA2Q9HCG7 927 aaPredicted RBP13.66□□□□□ -0.22
CDK5RAP3-204ENST00000577664 IL1RAPL2Q9NP60 686 aa13.66□□□□□ -0.22
CDK5RAP3-204ENST00000577664 CEP290O15078 2479 aa13.66□□□□□ -0.22
CDK5RAP3-204ENST00000577664 A0A1B0GUL6 1792 aa13.66□□□□□ -0.22
CDK5RAP3-204ENST00000577664 ZNF804BA4D1E1 1349 aa13.65□□□□□ -0.22
CDK5RAP3-204ENST00000577664 SMARCA5O60264 1052 aaPredicted RBP13.65□□□□□ -0.22
CDK5RAP3-204ENST00000577664 TAF5LO75529 589 aa13.65□□□□□ -0.22
CDK5RAP3-204ENST00000577664 IFIT1P09914 478 aaKnown RBP13.65□□□□□ -0.22
CDK5RAP3-204ENST00000577664 ZNF157P51786 506 aaPredicted RBP13.65□□□□□ -0.22
CDK5RAP3-204ENST00000577664 ATP2B3Q16720 1220 aa13.65□□□□□ -0.22
CDK5RAP3-204ENST00000577664 HELBQ8NG08 1087 aaPredicted RBP13.65□□□□□ -0.22
CDK5RAP3-204ENST00000577664 LNPKQ9C0E8 428 aa13.65□□□□□ -0.22
CDK5RAP3-204ENST00000577664 ANKIB1Q9P2G1 1089 aa13.65□□□□□ -0.22
CDK5RAP3-204ENST00000577664 ZBTB47Q9UFB7 747 aaPredicted RBP13.65□□□□□ -0.22
CDK5RAP3-204ENST00000577664 POLLQ9UGP5 575 aa13.65□□□□□ -0.22
CDK5RAP3-204ENST00000577664 GGA1Q9UJY5 639 aa13.65□□□□□ -0.22
CDK5RAP3-204ENST00000577664 NSFL1CQ9UNZ2 370 aaKnown RBP13.65□□□□□ -0.22
CDK5RAP3-204ENST00000577664 KIAA0100Q14667 2235 aaKnown RBP13.65□□□□□ -0.22
CDK5RAP3-204ENST00000577664 CENPFP49454 3210 aa13.65□□□□□ -0.22
CDK5RAP3-204ENST00000577664 TTC41PQ6P2S7 1318 aa13.64□□□□□ -0.23
CDK5RAP3-204ENST00000577664 ZNF609O15014 1411 aa13.64□□□□□ -0.23
CDK5RAP3-204ENST00000577664 SLC5A1P13866 664 aa13.64□□□□□ -0.23
CDK5RAP3-204ENST00000577664 PDE4AP27815 886 aa13.64□□□□□ -0.23
CDK5RAP3-204ENST00000577664 FBXO33Q7Z6M2 555 aa13.64□□□□□ -0.23
CDK5RAP3-204ENST00000577664 PLEKHM2Q8IWE5 1019 aa13.64□□□□□ -0.23
CDK5RAP3-204ENST00000577664 LARGE2Q8N3Y3 721 aa13.64□□□□□ -0.23
CDK5RAP3-204ENST00000577664 SUPT20HQ8NEM7 779 aa13.64□□□□□ -0.23
CDK5RAP3-204ENST00000577664 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.64□□□□□ -0.23
CDK5RAP3-204ENST00000577664 XAGE2Q96GT9 111 aa13.64□□□□□ -0.23
CDK5RAP3-204ENST00000577664 DBNLQ9UJU6 430 aaKnown RBP13.64□□□□□ -0.23
CDK5RAP3-204ENST00000577664 SPEF2Q9C093 1822 aa13.64□□□□□ -0.23
CDK5RAP3-204ENST00000577664 AOX1Q06278 1338 aa13.64□□□□□ -0.23
CDK5RAP3-204ENST00000577664 PAPPA2Q9BXP8 1791 aa13.63□□□□□ -0.23
CDK5RAP3-204ENST00000577664 MED23Q9ULK4 1368 aa13.63□□□□□ -0.23
CDK5RAP3-204ENST00000577664 WTIPA6NIX2 430 aaPredicted RBP13.63□□□□□ -0.23
CDK5RAP3-204ENST00000577664 APBB1O00213 710 aa13.63□□□□□ -0.23
CDK5RAP3-204ENST00000577664 IFIT2P09913 472 aaKnown RBP13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms