RNA–Protein interactions for RNA: ENST00000577246.5

COPS3-214, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 639 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-214ENST00000577246 EFCC1Q9HA90 598 aa17.06■□□□□ 0.32
COPS3-214ENST00000577246 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.06■□□□□ 0.32
COPS3-214ENST00000577246 PTPN22Q9Y2R2 807 aa17.06■□□□□ 0.32
COPS3-214ENST00000577246 ZNF646O15015 1829 aaPredicted RBP17.05■□□□□ 0.32
COPS3-214ENST00000577246 SPDYE2BA6NHP3 402 aa17.05■□□□□ 0.32
COPS3-214ENST00000577246 CSF1RP07333 972 aa17.05■□□□□ 0.32
COPS3-214ENST00000577246 SPDYE6P0CI01 402 aa17.05■□□□□ 0.32
COPS3-214ENST00000577246 TNFAIP1Q13829 316 aa17.05■□□□□ 0.32
COPS3-214ENST00000577246 CFAP100Q494V2 611 aa17.05■□□□□ 0.32
COPS3-214ENST00000577246 ARMC5Q96C12 935 aa17.05■□□□□ 0.32
COPS3-214ENST00000577246 CLMNQ96JQ2 1002 aa17.05■□□□□ 0.32
COPS3-214ENST00000577246 VEZTQ9HBM0 779 aa17.05■□□□□ 0.32
COPS3-214ENST00000577246 FZD1Q9UP38 647 aa17.05■□□□□ 0.32
COPS3-214ENST00000577246 MYH3P11055 1940 aa17.05■□□□□ 0.32
COPS3-214ENST00000577246 POTEFA5A3E0 1075 aa17.04■□□□□ 0.32
COPS3-214ENST00000577246 SLC4A2P04920 1241 aa17.04■□□□□ 0.32
COPS3-214ENST00000577246 SP3Q02447 781 aa17.04■□□□□ 0.32
COPS3-214ENST00000577246 CRHR2Q13324 411 aa17.04■□□□□ 0.32
COPS3-214ENST00000577246 CD99L2Q8TCZ2 262 aa17.04■□□□□ 0.32
COPS3-214ENST00000577246 SPEF2Q9C093 1822 aa17.03■□□□□ 0.32
COPS3-214ENST00000577246 SSC5DA1L4H1 1573 aa17.03■□□□□ 0.32
COPS3-214ENST00000577246 CLRN2A0PK11 232 aa17.03■□□□□ 0.32
COPS3-214ENST00000577246 F8W031 263 aaPredicted RBP17.03■□□□□ 0.32
COPS3-214ENST00000577246 IL1R1P14778 569 aa17.03■□□□□ 0.32
COPS3-214ENST00000577246 RBM5P52756 815 aaKnown RBP eCLIP17.03■□□□□ 0.32
COPS3-214ENST00000577246 IFIT5Q13325 482 aaKnown RBP17.03■□□□□ 0.32
COPS3-214ENST00000577246 TWISTNBQ3B726 338 aaPredicted RBP17.03■□□□□ 0.32
COPS3-214ENST00000577246 CERS5Q8N5B7 392 aa17.03■□□□□ 0.32
COPS3-214ENST00000577246 LINS1Q8NG48 757 aa17.03■□□□□ 0.32
COPS3-214ENST00000577246 TMEM106CQ9BVX2 250 aa17.03■□□□□ 0.32
COPS3-214ENST00000577246 PRKRIP1Q9H875 184 aaPredicted RBP17.03■□□□□ 0.32
COPS3-214ENST00000577246 TESPA1A2RU30 521 aaPredicted RBP17.02■□□□□ 0.32
COPS3-214ENST00000577246 WDHD1O75717 1129 aaPredicted RBP17.02■□□□□ 0.32
COPS3-214ENST00000577246 FLIIQ13045 1269 aa17.02■□□□□ 0.32
COPS3-214ENST00000577246 FKBP5Q13451 457 aaPredicted RBP17.02■□□□□ 0.32
COPS3-214ENST00000577246 NBPF11Q86T75 865 aa17.02■□□□□ 0.32
COPS3-214ENST00000577246 DNAAF4Q8WXU2 420 aa17.02■□□□□ 0.32
COPS3-214ENST00000577246 CASP7P55210 303 aa17.01■□□□□ 0.31
COPS3-214ENST00000577246 RASA3Q14644 834 aa17.01■□□□□ 0.31
COPS3-214ENST00000577246 NBPF12Q5TAG4 269 aaPredicted RBP17.01■□□□□ 0.31
COPS3-214ENST00000577246 TSR2Q969E8 191 aaKnown RBP17.01■□□□□ 0.31
COPS3-214ENST00000577246 PRMT6Q96LA8 375 aaPredicted RBP17.01■□□□□ 0.31
COPS3-214ENST00000577246 IRS2Q9Y4H2 1338 aa17■□□□□ 0.31
COPS3-214ENST00000577246 TAF5LO75529 589 aa17■□□□□ 0.31
COPS3-214ENST00000577246 USP2O75604 605 aaPredicted RBP17■□□□□ 0.31
COPS3-214ENST00000577246 G2E3Q7L622 706 aa17■□□□□ 0.31
COPS3-214ENST00000577246 OPTNQ96CV9 577 aa17■□□□□ 0.31
COPS3-214ENST00000577246 CHMP3Q9Y3E7 222 aa17■□□□□ 0.31
COPS3-214ENST00000577246 CCDC27Q2M243 656 aa16.99■□□□□ 0.31
COPS3-214ENST00000577246 SLC9C1Q4G0N8 1177 aa16.99■□□□□ 0.31
COPS3-214ENST00000577246 TAF7LQ5H9L4 462 aa16.99■□□□□ 0.31
COPS3-214ENST00000577246 ZFYVE28Q9HCC9 887 aa16.99■□□□□ 0.31
COPS3-214ENST00000577246 SERPINA10Q9UK55 444 aa16.99■□□□□ 0.31
COPS3-214ENST00000577246 LAMB1P07942 1786 aa16.98■□□□□ 0.31
COPS3-214ENST00000577246 EN2P19622 333 aaPredicted RBP16.98■□□□□ 0.31
COPS3-214ENST00000577246 GJA5P36382 358 aa16.98■□□□□ 0.31
COPS3-214ENST00000577246 TNNI2P48788 182 aa16.98■□□□□ 0.31
COPS3-214ENST00000577246 GTF2A2P52657 109 aa16.98■□□□□ 0.31
COPS3-214ENST00000577246 CCDC57Q2TAC2 916 aa16.98■□□□□ 0.31
COPS3-214ENST00000577246 HELBQ8NG08 1087 aaPredicted RBP16.98■□□□□ 0.31
COPS3-214ENST00000577246 ZNF333Q96JL9 665 aa16.98■□□□□ 0.31
COPS3-214ENST00000577246 PTPN18Q99952 460 aa16.98■□□□□ 0.31
COPS3-214ENST00000577246 ELP3Q9H9T3 547 aa16.98■□□□□ 0.31
COPS3-214ENST00000577246 PCDHAC2Q9Y5I4 1007 aa16.98■□□□□ 0.31
COPS3-214ENST00000577246 IL16Q14005 1332 aa16.97■□□□□ 0.31
COPS3-214ENST00000577246 SNAP23O00161 211 aa16.97■□□□□ 0.31
COPS3-214ENST00000577246 TAF1CQ15572 869 aaPredicted RBP16.97■□□□□ 0.31
COPS3-214ENST00000577246 SPDYE2Q495Y8 402 aa16.97■□□□□ 0.31
COPS3-214ENST00000577246 CSADQ9Y600 493 aa16.97■□□□□ 0.31
COPS3-214ENST00000577246 HTTP42858 3142 aa16.97■□□□□ 0.31
COPS3-214ENST00000577246 RBBP6Q7Z6E9 1792 aaKnown RBP16.97■□□□□ 0.31
COPS3-214ENST00000577246 FAM205AQ6ZU69 1335 aa16.96■□□□□ 0.31
COPS3-214ENST00000577246 SLC4A8Q2Y0W8 1093 aa16.96■□□□□ 0.31
COPS3-214ENST00000577246 MFSD14BQ5SR56 506 aa16.96■□□□□ 0.31
COPS3-214ENST00000577246 LDHAL6AQ6ZMR3 332 aa16.96■□□□□ 0.31
COPS3-214ENST00000577246 MS4A4AQ96JQ5 239 aa16.96■□□□□ 0.31
COPS3-214ENST00000577246 CNNM1Q9NRU3 951 aa16.96■□□□□ 0.31
COPS3-214ENST00000577246 ZNF70Q9UC06 446 aaPredicted RBP16.96■□□□□ 0.31
COPS3-214ENST00000577246 TTF2Q9UNY4 1162 aaKnown RBP16.96■□□□□ 0.31
COPS3-214ENST00000577246 ECM29Q5VYK3 1845 aa16.96■□□□□ 0.3
COPS3-214ENST00000577246 CCL15-CCL14A0A0B4J2E2 113 aa16.95■□□□□ 0.3
COPS3-214ENST00000577246 FOXO4P98177 505 aa16.95■□□□□ 0.3
COPS3-214ENST00000577246 KIF22Q14807 665 aa16.95■□□□□ 0.3
COPS3-214ENST00000577246 CCL15Q16663 113 aa16.95■□□□□ 0.3
COPS3-214ENST00000577246 WWC1Q8IX03 1113 aa16.95■□□□□ 0.3
COPS3-214ENST00000577246 JAG2Q9Y219 1238 aa16.95■□□□□ 0.3
COPS3-214ENST00000577246 PLIN1O60240 522 aa16.94■□□□□ 0.3
COPS3-214ENST00000577246 MAP3K9P80192 1104 aa16.94■□□□□ 0.3
COPS3-214ENST00000577246 LMBR1LQ6UX01 489 aa16.94■□□□□ 0.3
COPS3-214ENST00000577246 BRI3BPQ8WY22 251 aa16.94■□□□□ 0.3
COPS3-214ENST00000577246 HOOK2Q96ED9 719 aa16.94■□□□□ 0.3
COPS3-214ENST00000577246 ZCCHC17Q9NP64 241 aaKnown RBP16.94■□□□□ 0.3
COPS3-214ENST00000577246 MKI67P46013 3256 aaKnown RBP16.93■□□□□ 0.3
COPS3-214ENST00000577246 GNRH1P01148 92 aa16.93■□□□□ 0.3
COPS3-214ENST00000577246 HIBADHP31937 336 aaKnown RBP16.93■□□□□ 0.3
COPS3-214ENST00000577246 FXR1P51114 621 aaKnown RBP eCLIP16.93■□□□□ 0.3
COPS3-214ENST00000577246 VGLL4Q14135 290 aa16.93■□□□□ 0.3
COPS3-214ENST00000577246 UBE4AQ14139 1066 aa16.93■□□□□ 0.3
COPS3-214ENST00000577246 NCBP3Q53F19 620 aaKnown RBP16.93■□□□□ 0.3
COPS3-214ENST00000577246 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms