RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 KIAA0100Q14667 2235 aaKnown RBP13□□□□□ -0.33
NPLOC4-220ENST00000576940 AOX1Q06278 1338 aa13□□□□□ -0.33
NPLOC4-220ENST00000576940 TAF5LO75529 589 aa13□□□□□ -0.33
NPLOC4-220ENST00000576940 CHRNDQ07001 517 aa13□□□□□ -0.33
NPLOC4-220ENST00000576940 NEXNQ0ZGT2 675 aa13□□□□□ -0.33
NPLOC4-220ENST00000576940 G2E3Q7L622 706 aa13□□□□□ -0.33
NPLOC4-220ENST00000576940 HELBQ8NG08 1087 aaPredicted RBP13□□□□□ -0.33
NPLOC4-220ENST00000576940 ERO1AQ96HE7 468 aa13□□□□□ -0.33
NPLOC4-220ENST00000576940 MPHOSPH8Q99549 860 aa13□□□□□ -0.33
NPLOC4-220ENST00000576940 EFCC1Q9HA90 598 aa13□□□□□ -0.33
NPLOC4-220ENST00000576940 KCNJ4P48050 445 aa12.99□□□□□ -0.33
NPLOC4-220ENST00000576940 SP3Q02447 781 aa12.99□□□□□ -0.33
NPLOC4-220ENST00000576940 SUPT20HL1Q3ZLR7 823 aa12.99□□□□□ -0.33
NPLOC4-220ENST00000576940 CFAP100Q494V2 611 aa12.99□□□□□ -0.33
NPLOC4-220ENST00000576940 VEZTQ9HBM0 779 aa12.99□□□□□ -0.33
NPLOC4-220ENST00000576940 JAG2Q9Y219 1238 aa12.99□□□□□ -0.33
NPLOC4-220ENST00000576940 SSC5DA1L4H1 1573 aa12.98□□□□□ -0.33
NPLOC4-220ENST00000576940 CSF1RP07333 972 aa12.98□□□□□ -0.33
NPLOC4-220ENST00000576940 FXR1P51114 621 aaKnown RBP eCLIP12.98□□□□□ -0.33
NPLOC4-220ENST00000576940 OTUD7BQ6GQQ9 843 aa12.98□□□□□ -0.33
NPLOC4-220ENST00000576940 MTMR14Q8NCE2 650 aa12.98□□□□□ -0.33
NPLOC4-220ENST00000576940 ARMC5Q96C12 935 aa12.98□□□□□ -0.33
NPLOC4-220ENST00000576940 IRS2Q9Y4H2 1338 aa12.97□□□□□ -0.33
NPLOC4-220ENST00000576940 IREB2P48200 963 aaKnown RBP12.97□□□□□ -0.33
NPLOC4-220ENST00000576940 CALD1Q05682 793 aaKnown RBP12.97□□□□□ -0.33
NPLOC4-220ENST00000576940 GCKRQ14397 625 aa12.97□□□□□ -0.33
NPLOC4-220ENST00000576940 RASA3Q14644 834 aa12.97□□□□□ -0.33
NPLOC4-220ENST00000576940 TSR2Q969E8 191 aaKnown RBP12.97□□□□□ -0.33
NPLOC4-220ENST00000576940 PLA2G12BQ9BX93 195 aa12.97□□□□□ -0.33
NPLOC4-220ENST00000576940 COLQQ9Y215 455 aaPredicted RBP12.97□□□□□ -0.33
NPLOC4-220ENST00000576940 PPP2R3BQ9Y5P8 575 aa12.97□□□□□ -0.33
NPLOC4-220ENST00000576940 MYH3P11055 1940 aa12.96□□□□□ -0.33
NPLOC4-220ENST00000576940 TESPA1A2RU30 521 aaPredicted RBP12.96□□□□□ -0.33
NPLOC4-220ENST00000576940 SPDYE2BA6NHP3 402 aa12.96□□□□□ -0.33
NPLOC4-220ENST00000576940 UNCXA6NJT0 531 aa12.96□□□□□ -0.33
NPLOC4-220ENST00000576940 MYO1BO43795 1136 aa12.96□□□□□ -0.33
NPLOC4-220ENST00000576940 MYCP01106 439 aaPredicted RBP12.96□□□□□ -0.33
NPLOC4-220ENST00000576940 SLC4A2P04920 1241 aa12.96□□□□□ -0.33
NPLOC4-220ENST00000576940 SPDYE6P0CI01 402 aa12.96□□□□□ -0.33
NPLOC4-220ENST00000576940 RBM5P52756 815 aaKnown RBP eCLIP12.96□□□□□ -0.33
NPLOC4-220ENST00000576940 CASP7P55210 303 aa12.96□□□□□ -0.33
NPLOC4-220ENST00000576940 ANKRD13AQ8IZ07 590 aa12.96□□□□□ -0.33
NPLOC4-220ENST00000576940 TMEM106CQ9BVX2 250 aa12.96□□□□□ -0.33
NPLOC4-220ENST00000576940 CHMP4AQ9BY43 222 aa12.96□□□□□ -0.33
NPLOC4-220ENST00000576940 ELP3Q9H9T3 547 aa12.96□□□□□ -0.33
NPLOC4-220ENST00000576940 SZT2Q5T011 3432 aa12.95□□□□□ -0.34
NPLOC4-220ENST00000576940 ANKRD18BA2A2Z9 1011 aa12.95□□□□□ -0.34
NPLOC4-220ENST00000576940 IL1R1P14778 569 aa12.95□□□□□ -0.34
NPLOC4-220ENST00000576940 CNKSR2Q8WXI2 1034 aa12.95□□□□□ -0.34
NPLOC4-220ENST00000576940 OPTNQ96CV9 577 aa12.95□□□□□ -0.34
NPLOC4-220ENST00000576940 ZNF333Q96JL9 665 aa12.95□□□□□ -0.34
NPLOC4-220ENST00000576940 MS4A4AQ96JQ5 239 aa12.95□□□□□ -0.34
NPLOC4-220ENST00000576940 STK31Q9BXU1 1019 aa12.95□□□□□ -0.34
NPLOC4-220ENST00000576940 COL1A1P02452 1464 aaPredicted RBP12.95□□□□□ -0.34
NPLOC4-220ENST00000576940 PLIN1O60240 522 aa12.94□□□□□ -0.34
NPLOC4-220ENST00000576940 C15orf52Q6ZUT6 534 aaKnown RBP12.94□□□□□ -0.34
NPLOC4-220ENST00000576940 CDAN1Q8IWY9 1227 aa12.94□□□□□ -0.34
NPLOC4-220ENST00000576940 PTCH2Q9Y6C5 1203 aa12.94□□□□□ -0.34
NPLOC4-220ENST00000576940 SLC4A8Q2Y0W8 1093 aa12.93□□□□□ -0.34
NPLOC4-220ENST00000576940 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.93□□□□□ -0.34
NPLOC4-220ENST00000576940 BRI3BPQ8WY22 251 aa12.93□□□□□ -0.34
NPLOC4-220ENST00000576940 ZNF594Q96JF6 807 aaPredicted RBP12.93□□□□□ -0.34
NPLOC4-220ENST00000576940 TDRD3Q9H7E2 651 aaKnown RBP12.93□□□□□ -0.34
NPLOC4-220ENST00000576940 ZNF70Q9UC06 446 aaPredicted RBP12.93□□□□□ -0.34
NPLOC4-220ENST00000576940 CCL15-CCL14A0A0B4J2E2 113 aa12.92□□□□□ -0.34
NPLOC4-220ENST00000576940 FKBP1AP62942 108 aaKnown RBP12.92□□□□□ -0.34
NPLOC4-220ENST00000576940 FOXO4P98177 505 aa12.92□□□□□ -0.34
NPLOC4-220ENST00000576940 TAF1CQ15572 869 aaPredicted RBP12.92□□□□□ -0.34
NPLOC4-220ENST00000576940 CCL15Q16663 113 aa12.92□□□□□ -0.34
NPLOC4-220ENST00000576940 TWISTNBQ3B726 338 aaPredicted RBP12.92□□□□□ -0.34
NPLOC4-220ENST00000576940 SLC9C1Q4G0N8 1177 aa12.92□□□□□ -0.34
NPLOC4-220ENST00000576940 ZNF804AQ7Z570 1209 aa12.92□□□□□ -0.34
NPLOC4-220ENST00000576940 NBPF11Q86T75 865 aa12.92□□□□□ -0.34
NPLOC4-220ENST00000576940 FAM43AQ8N2R8 423 aa12.92□□□□□ -0.34
NPLOC4-220ENST00000576940 TEPSINQ96N21 525 aa12.92□□□□□ -0.34
NPLOC4-220ENST00000576940 ZFYVE28Q9HCC9 887 aa12.92□□□□□ -0.34
NPLOC4-220ENST00000576940 CHMP3Q9Y3E7 222 aa12.92□□□□□ -0.34
NPLOC4-220ENST00000576940 TCP10L2B9ZVM9 353 aa12.91□□□□□ -0.34
NPLOC4-220ENST00000576940 H0YGN5 161 aa12.91□□□□□ -0.34
NPLOC4-220ENST00000576940 ECM2O94769 699 aaPredicted RBP12.91□□□□□ -0.34
NPLOC4-220ENST00000576940 MAP3K9P80192 1104 aa12.91□□□□□ -0.34
NPLOC4-220ENST00000576940 FLIIQ13045 1269 aa12.91□□□□□ -0.34
NPLOC4-220ENST00000576940 IFIT5Q13325 482 aaKnown RBP12.91□□□□□ -0.34
NPLOC4-220ENST00000576940 SPDYE2Q495Y8 402 aa12.91□□□□□ -0.34
NPLOC4-220ENST00000576940 SH3TC2Q8TF17 1288 aa12.91□□□□□ -0.34
NPLOC4-220ENST00000576940 DNAAF4Q8WXU2 420 aa12.91□□□□□ -0.34
NPLOC4-220ENST00000576940 ARHGAP39Q9C0H5 1083 aa12.91□□□□□ -0.34
NPLOC4-220ENST00000576940 TMEM39BQ9GZU3 492 aa12.91□□□□□ -0.34
NPLOC4-220ENST00000576940 MYH16Q9H6N6 1097 aa12.91□□□□□ -0.34
NPLOC4-220ENST00000576940 TTF2Q9UNY4 1162 aaKnown RBP12.91□□□□□ -0.34
NPLOC4-220ENST00000576940 RBBP6Q7Z6E9 1792 aaKnown RBP12.91□□□□□ -0.34
NPLOC4-220ENST00000576940 FKBP5Q13451 457 aaPredicted RBP12.9□□□□□ -0.34
NPLOC4-220ENST00000576940 VGLL4Q14135 290 aa12.9□□□□□ -0.34
NPLOC4-220ENST00000576940 ARHGEF6Q15052 776 aa12.9□□□□□ -0.34
NPLOC4-220ENST00000576940 EPHA10Q5JZY3 1008 aa12.9□□□□□ -0.34
NPLOC4-220ENST00000576940 LINS1Q8NG48 757 aa12.9□□□□□ -0.34
NPLOC4-220ENST00000576940 OTUD5Q96G74 571 aa12.9□□□□□ -0.34
NPLOC4-220ENST00000576940 PRKRIP1Q9H875 184 aaPredicted RBP12.9□□□□□ -0.34
NPLOC4-220ENST00000576940 ECM29Q5VYK3 1845 aa12.9□□□□□ -0.34
NPLOC4-220ENST00000576940 GYG1P46976 350 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms