RNA–Protein interactions for RNA: ENST00000576359.1

RAB40B-211, Transcript of RAB40B, member RAS oncogene family, humanhuman

Gene RAB40B, Length 2,522 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-211ENST00000576359 CTNNA3Q9UI47 895 aa16.56■□□□□ 0.24
RAB40B-211ENST00000576359 MYH14Q7Z406 1995 aaKnown RBP16.56■□□□□ 0.24
RAB40B-211ENST00000576359 ADCY5O95622 1261 aa16.55■□□□□ 0.24
RAB40B-211ENST00000576359 ATP6V1AP38606 617 aa16.55■□□□□ 0.24
RAB40B-211ENST00000576359 IMMTQ16891 758 aaKnown RBP16.55■□□□□ 0.24
RAB40B-211ENST00000576359 CCDC102BQ68D86 513 aa16.55■□□□□ 0.24
RAB40B-211ENST00000576359 THRAP3Q9Y2W1 955 aaKnown RBP16.55■□□□□ 0.24
RAB40B-211ENST00000576359 ATRNO75882 1429 aa16.55■□□□□ 0.24
RAB40B-211ENST00000576359 LTBP4Q8N2S1 1624 aa16.55■□□□□ 0.24
RAB40B-211ENST00000576359 MYH15Q9Y2K3 1946 aa16.55■□□□□ 0.24
RAB40B-211ENST00000576359 FAM177BA6PVY3 158 aa16.55■□□□□ 0.24
RAB40B-211ENST00000576359 H3BQV1 296 aa16.55■□□□□ 0.24
RAB40B-211ENST00000576359 PPFIA3O75145 1194 aa16.55■□□□□ 0.24
RAB40B-211ENST00000576359 FGFR2P21802 821 aa16.55■□□□□ 0.24
RAB40B-211ENST00000576359 ARID4AP29374 1257 aaPredicted RBP16.55■□□□□ 0.24
RAB40B-211ENST00000576359 IFFO2Q5TF58 517 aa16.55■□□□□ 0.24
RAB40B-211ENST00000576359 FBXL16Q8N461 479 aa16.55■□□□□ 0.24
RAB40B-211ENST00000576359 ZNF274Q96GC6 653 aaPredicted RBP16.55■□□□□ 0.24
RAB40B-211ENST00000576359 LOC102724428A0A0B4J2F2 783 aa16.54■□□□□ 0.24
RAB40B-211ENST00000576359 GOLGA6L4A6NEF3 574 aa16.54■□□□□ 0.24
RAB40B-211ENST00000576359 KDM4AO75164 1064 aa16.54■□□□□ 0.24
RAB40B-211ENST00000576359 CAMTA2O94983 1202 aa16.54■□□□□ 0.24
RAB40B-211ENST00000576359 FOSBP53539 338 aa16.54■□□□□ 0.24
RAB40B-211ENST00000576359 SIK1P57059 783 aa16.54■□□□□ 0.24
RAB40B-211ENST00000576359 MB21D2Q8IYB1 491 aaPredicted RBP16.54■□□□□ 0.24
RAB40B-211ENST00000576359 NUP62CLQ9H1M0 184 aa16.54■□□□□ 0.24
RAB40B-211ENST00000576359 SNAP23O00161 211 aa16.54■□□□□ 0.24
RAB40B-211ENST00000576359 CCDC192P0DO97 292 aa16.54■□□□□ 0.24
RAB40B-211ENST00000576359 EVCP57679 992 aa16.54■□□□□ 0.24
RAB40B-211ENST00000576359 CAMK4Q16566 473 aa16.54■□□□□ 0.24
RAB40B-211ENST00000576359 SLC9C2Q5TAH2 1124 aa16.54■□□□□ 0.24
RAB40B-211ENST00000576359 PGBD1Q96JS3 809 aa16.54■□□□□ 0.24
RAB40B-211ENST00000576359 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.54■□□□□ 0.24
RAB40B-211ENST00000576359 NBPF3Q9H094 633 aa16.54■□□□□ 0.24
RAB40B-211ENST00000576359 NAP1L2Q9ULW6 460 aaPredicted RBP16.54■□□□□ 0.24
RAB40B-211ENST00000576359 CICQ96RK0 1608 aaPredicted RBP16.53■□□□□ 0.24
RAB40B-211ENST00000576359 ANTXR2P58335 489 aa16.53■□□□□ 0.24
RAB40B-211ENST00000576359 PUM3Q15397 648 aaKnown RBP16.53■□□□□ 0.24
RAB40B-211ENST00000576359 MPNDQ8N594 471 aa16.53■□□□□ 0.24
RAB40B-211ENST00000576359 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.53■□□□□ 0.24
RAB40B-211ENST00000576359 SPATA31A5Q5VU36 1347 aa16.53■□□□□ 0.24
RAB40B-211ENST00000576359 SPATA31A7Q8IWB4 1347 aa16.53■□□□□ 0.24
RAB40B-211ENST00000576359 ADD1P35611 737 aaKnown RBP16.53■□□□□ 0.24
RAB40B-211ENST00000576359 HMGN5P82970 282 aaKnown RBP16.53■□□□□ 0.24
RAB40B-211ENST00000576359 MAP3K11Q16584 847 aa16.53■□□□□ 0.24
RAB40B-211ENST00000576359 ZSCAN16Q9H4T2 348 aaPredicted RBP16.53■□□□□ 0.24
RAB40B-211ENST00000576359 SEC31BQ9NQW1 1179 aa16.53■□□□□ 0.24
RAB40B-211ENST00000576359 DACT1Q9NYF0 836 aa16.53■□□□□ 0.24
RAB40B-211ENST00000576359 MROH5Q6ZUA9 1318 aa16.53■□□□□ 0.24
RAB40B-211ENST00000576359 NAA16Q6N069 864 aaPredicted RBP16.52■□□□□ 0.24
RAB40B-211ENST00000576359 NKX2-3Q8TAU0 364 aa16.52■□□□□ 0.24
RAB40B-211ENST00000576359 LPIN2Q92539 896 aa16.52■□□□□ 0.24
RAB40B-211ENST00000576359 AK7Q96M32 723 aa16.52■□□□□ 0.24
RAB40B-211ENST00000576359 DENND2AQ9ULE3 1009 aa16.52■□□□□ 0.24
RAB40B-211ENST00000576359 PRC1O43663 620 aa16.52■□□□□ 0.23
RAB40B-211ENST00000576359 IDH1O75874 414 aaKnown RBP16.52■□□□□ 0.23
RAB40B-211ENST00000576359 TTF1Q15361 905 aaPredicted RBP16.52■□□□□ 0.23
RAB40B-211ENST00000576359 WWC3Q9ULE0 1092 aa16.52■□□□□ 0.23
RAB40B-211ENST00000576359 COL4A1P02462 1669 aa16.51■□□□□ 0.23
RAB40B-211ENST00000576359 TCRBV5S4A2TA0A5A2 114 aa16.51■□□□□ 0.23
RAB40B-211ENST00000576359 NUTM2BA6NNL0 878 aaPredicted RBP16.51■□□□□ 0.23
RAB40B-211ENST00000576359 NUTM2EB1AL46 878 aaPredicted RBP16.51■□□□□ 0.23
RAB40B-211ENST00000576359 FDPSP14324 419 aaKnown RBP16.51■□□□□ 0.23
RAB40B-211ENST00000576359 PLCB2Q00722 1185 aa16.51■□□□□ 0.23
RAB40B-211ENST00000576359 ZSCAN25Q6NSZ9 544 aa16.51■□□□□ 0.23
RAB40B-211ENST00000576359 NUTM2AQ8IVF1 878 aaPredicted RBP16.51■□□□□ 0.23
RAB40B-211ENST00000576359 UTP14AQ9BVJ6 771 aaKnown RBP16.51■□□□□ 0.23
RAB40B-211ENST00000576359 ZNF532Q9HCE3 1301 aa16.51■□□□□ 0.23
RAB40B-211ENST00000576359 CARMIL3Q8ND23 1372 aa16.51■□□□□ 0.23
RAB40B-211ENST00000576359 ZNF213O14771 459 aa16.51■□□□□ 0.23
RAB40B-211ENST00000576359 PDE6AP16499 860 aa16.51■□□□□ 0.23
RAB40B-211ENST00000576359 UBE3CQ15386 1083 aa16.51■□□□□ 0.23
RAB40B-211ENST00000576359 FTOQ9C0B1 505 aaKnown RBP eCLIP16.51■□□□□ 0.23
RAB40B-211ENST00000576359 TNMDQ9H2S6 317 aa16.51■□□□□ 0.23
RAB40B-211ENST00000576359 NTSR2O95665 410 aa16.5■□□□□ 0.23
RAB40B-211ENST00000576359 DDX19AQ9NUU7 478 aaKnown RBP16.5■□□□□ 0.23
RAB40B-211ENST00000576359 HPS5Q9UPZ3 1129 aa16.5■□□□□ 0.23
RAB40B-211ENST00000576359 LAMB2P55268 1798 aa16.5■□□□□ 0.23
RAB40B-211ENST00000576359 DOCK2Q92608 1830 aa16.5■□□□□ 0.23
RAB40B-211ENST00000576359 AP5Z1O43299 807 aa16.5■□□□□ 0.23
RAB40B-211ENST00000576359 KCNQ2O43526 872 aa16.5■□□□□ 0.23
RAB40B-211ENST00000576359 TPM2P07951 284 aa16.5■□□□□ 0.23
RAB40B-211ENST00000576359 UQCRFS1P1P0C7P4 283 aa16.5■□□□□ 0.23
RAB40B-211ENST00000576359 TBC1D10CQ8IV04 446 aa16.5■□□□□ 0.23
RAB40B-211ENST00000576359 CKAP2LQ8IYA6 745 aa16.5■□□□□ 0.23
RAB40B-211ENST00000576359 NCOA7Q8NI08 942 aa16.5■□□□□ 0.23
RAB40B-211ENST00000576359 BICD2Q8TD16 824 aa16.5■□□□□ 0.23
RAB40B-211ENST00000576359 ZNF830Q96NB3 372 aaPredicted RBP16.5■□□□□ 0.23
RAB40B-211ENST00000576359 NR1I2O75469 434 aa16.49■□□□□ 0.23
RAB40B-211ENST00000576359 GUCY1B3Q02153 619 aa16.49■□□□□ 0.23
RAB40B-211ENST00000576359 TYRO3Q06418 890 aa16.49■□□□□ 0.23
RAB40B-211ENST00000576359 ILDR1Q86SU0 546 aaPredicted RBP16.49■□□□□ 0.23
RAB40B-211ENST00000576359 CFAP45Q9UL16 551 aa16.49■□□□□ 0.23
RAB40B-211ENST00000576359 R3HCC1Q9Y3T6 440 aaKnown RBP16.49■□□□□ 0.23
RAB40B-211ENST00000576359 MRVI1Q9Y6F6 885 aa16.49■□□□□ 0.23
RAB40B-211ENST00000576359 COL5A3P25940 1745 aaPredicted RBP16.49■□□□□ 0.23
RAB40B-211ENST00000576359 KLF18A0A0U1RQI7 1052 aa16.49■□□□□ 0.23
RAB40B-211ENST00000576359 CEBPZQ03701 1054 aaKnown RBP16.49■□□□□ 0.23
RAB40B-211ENST00000576359 RASGRF1Q13972 1273 aa16.49■□□□□ 0.23
RAB40B-211ENST00000576359 NIP7Q9Y221 180 aaKnown RBP eCLIP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms