RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 VPS33BQ9H267 617 aa9.78□□□□□ -0.84
CCDC40-215ENST00000576033 TAF1DQ9H5J8 278 aaPredicted RBP9.78□□□□□ -0.84
CCDC40-215ENST00000576033 GPRC5DQ9NZD1 345 aa9.78□□□□□ -0.84
CCDC40-215ENST00000576033 DBNLQ9UJU6 430 aaKnown RBP9.78□□□□□ -0.84
CCDC40-215ENST00000576033 NOP58Q9Y2X3 529 aaKnown RBP9.78□□□□□ -0.84
CCDC40-215ENST00000576033 FPGT-TNNI3KV9GXZ4 949 aa9.78□□□□□ -0.84
CCDC40-215ENST00000576033 DOCK2Q92608 1830 aa9.77□□□□□ -0.84
CCDC40-215ENST00000576033 USP17L3A6NCW0 530 aa9.77□□□□□ -0.85
CCDC40-215ENST00000576033 USP17L4A6NCW7 530 aa9.77□□□□□ -0.85
CCDC40-215ENST00000576033 VIL1P09327 827 aaKnown RBP9.77□□□□□ -0.85
CCDC40-215ENST00000576033 HIBADHP31937 336 aaKnown RBP9.77□□□□□ -0.85
CCDC40-215ENST00000576033 HIRAP54198 1017 aaPredicted RBP9.77□□□□□ -0.85
CCDC40-215ENST00000576033 RBM26Q5T8P6 1007 aaKnown RBP9.77□□□□□ -0.85
CCDC40-215ENST00000576033 TSHZ3Q63HK5 1081 aa9.77□□□□□ -0.85
CCDC40-215ENST00000576033 CCDC102BQ68D86 513 aa9.77□□□□□ -0.85
CCDC40-215ENST00000576033 DPY19L2Q6NUT2 758 aa9.77□□□□□ -0.85
CCDC40-215ENST00000576033 USP17L1Q7RTZ2 530 aa9.77□□□□□ -0.85
CCDC40-215ENST00000576033 TDRD7Q8NHU6 1098 aaKnown RBP9.77□□□□□ -0.85
CCDC40-215ENST00000576033 RHPN1Q8TCX5 695 aa9.77□□□□□ -0.85
CCDC40-215ENST00000576033 NEUROD6Q96NK8 337 aa9.77□□□□□ -0.85
CCDC40-215ENST00000576033 GMLQ99445 158 aa9.77□□□□□ -0.85
CCDC40-215ENST00000576033 HACL1Q9UJ83 578 aa9.77□□□□□ -0.85
CCDC40-215ENST00000576033 HDAC5Q9UQL6 1122 aa9.77□□□□□ -0.85
CCDC40-215ENST00000576033 POLR2AP24928 1970 aaKnown RBP9.77□□□□□ -0.85
CCDC40-215ENST00000576033 IGHDP01880 384 aa9.76□□□□□ -0.85
CCDC40-215ENST00000576033 IFIT1P09914 478 aaKnown RBP9.76□□□□□ -0.85
CCDC40-215ENST00000576033 RASGRF1Q13972 1273 aa9.76□□□□□ -0.85
CCDC40-215ENST00000576033 TTLL5Q6EMB2 1281 aa9.76□□□□□ -0.85
CCDC40-215ENST00000576033 PODNQ7Z5L7 613 aa9.76□□□□□ -0.85
CCDC40-215ENST00000576033 RPAP2Q8IXW5 612 aaPredicted RBP9.76□□□□□ -0.85
CCDC40-215ENST00000576033 OTUD7AQ8TE49 926 aaPredicted RBP9.76□□□□□ -0.85
CCDC40-215ENST00000576033 SNRKQ9NRH2 765 aa9.76□□□□□ -0.85
CCDC40-215ENST00000576033 CNOT7Q9UIV1 285 aaKnown RBP9.76□□□□□ -0.85
CCDC40-215ENST00000576033 FBXO3Q9UK99 471 aa9.76□□□□□ -0.85
CCDC40-215ENST00000576033 MCAMP43121 646 aa9.75□□□□□ -0.85
CCDC40-215ENST00000576033 HTRA3P83110 453 aa9.75□□□□□ -0.85
CCDC40-215ENST00000576033 TNIP1Q15025 636 aa9.75□□□□□ -0.85
CCDC40-215ENST00000576033 STRIP1Q5VSL9 837 aa9.75□□□□□ -0.85
CCDC40-215ENST00000576033 MAP1SQ66K74 1059 aaPredicted RBP9.75□□□□□ -0.85
CCDC40-215ENST00000576033 AACSQ86V21 672 aa9.75□□□□□ -0.85
CCDC40-215ENST00000576033 VPS37DQ86XT2 251 aa9.75□□□□□ -0.85
CCDC40-215ENST00000576033 MYH2Q9UKX2 1941 aa9.75□□□□□ -0.85
CCDC40-215ENST00000576033 PCNTO95613 3336 aa9.75□□□□□ -0.85
CCDC40-215ENST00000576033 TRAF5O00463 557 aa9.74□□□□□ -0.85
CCDC40-215ENST00000576033 VEGFAP15692 232 aaPredicted RBP9.74□□□□□ -0.85
CCDC40-215ENST00000576033 LMOD1P29536 600 aaPredicted RBP9.74□□□□□ -0.85
CCDC40-215ENST00000576033 PRDX5P30044 214 aa9.74□□□□□ -0.85
CCDC40-215ENST00000576033 CAVIN4Q5BKX8 364 aa9.74□□□□□ -0.85
CCDC40-215ENST00000576033 MFSD14BQ5SR56 506 aa9.74□□□□□ -0.85
CCDC40-215ENST00000576033 TBC1D9Q6ZT07 1266 aa9.74□□□□□ -0.85
CCDC40-215ENST00000576033 SKAP1Q86WV1 359 aa9.74□□□□□ -0.85
CCDC40-215ENST00000576033 C16orf71Q8IYS4 520 aaPredicted RBP9.74□□□□□ -0.85
CCDC40-215ENST00000576033 EDC3Q96F86 508 aaKnown RBP9.74□□□□□ -0.85
CCDC40-215ENST00000576033 HMG20BQ9P0W2 317 aa9.74□□□□□ -0.85
CCDC40-215ENST00000576033 FAM205AQ6ZU69 1335 aa9.74□□□□□ -0.85
CCDC40-215ENST00000576033 CDK5RAP2Q96SN8 1893 aa9.74□□□□□ -0.85
CCDC40-215ENST00000576033 ADM5C9JUS6 153 aa9.73□□□□□ -0.85
CCDC40-215ENST00000576033 HMMRO75330 724 aa9.73□□□□□ -0.85
CCDC40-215ENST00000576033 FRAT2O75474 233 aaPredicted RBP9.73□□□□□ -0.85
CCDC40-215ENST00000576033 CHGBP05060 677 aa9.73□□□□□ -0.85
CCDC40-215ENST00000576033 DIXDC1Q155Q3 683 aa9.73□□□□□ -0.85
CCDC40-215ENST00000576033 KIF4BQ2VIQ3 1234 aa9.73□□□□□ -0.85
CCDC40-215ENST00000576033 NBPF9Q3BBW0 867 aa9.73□□□□□ -0.85
CCDC40-215ENST00000576033 B4GALNT3Q6L9W6 998 aa9.73□□□□□ -0.85
CCDC40-215ENST00000576033 ZNF384Q8TF68 577 aa9.73□□□□□ -0.85
CCDC40-215ENST00000576033 MYOZ2Q9NPC6 264 aa9.73□□□□□ -0.85
CCDC40-215ENST00000576033 ADARB2Q9NS39 739 aaKnown RBP9.73□□□□□ -0.85
CCDC40-215ENST00000576033 MYH7P12883 1935 aa9.72□□□□□ -0.85
CCDC40-215ENST00000576033 IQCA1LA6NCM1 817 aa9.72□□□□□ -0.85
CCDC40-215ENST00000576033 USP17L8P0C7I0 530 aa9.72□□□□□ -0.85
CCDC40-215ENST00000576033 ARID4AP29374 1257 aaPredicted RBP9.72□□□□□ -0.85
CCDC40-215ENST00000576033 ZNF280AP59817 542 aaPredicted RBP9.72□□□□□ -0.85
CCDC40-215ENST00000576033 SLFNL1Q499Z3 407 aa9.72□□□□□ -0.85
CCDC40-215ENST00000576033 TTC39AQ5SRH9 613 aa9.72□□□□□ -0.85
CCDC40-215ENST00000576033 KIF1BPQ96EK5 621 aa9.72□□□□□ -0.85
CCDC40-215ENST00000576033 GLIS2Q9BZE0 524 aaPredicted RBP9.72□□□□□ -0.85
CCDC40-215ENST00000576033 ANTXR1Q9H6X2 564 aa9.72□□□□□ -0.85
CCDC40-215ENST00000576033 DCTPP1Q9H773 170 aa9.72□□□□□ -0.85
CCDC40-215ENST00000576033 GGA3Q9NZ52 723 aa9.72□□□□□ -0.85
CCDC40-215ENST00000576033 TTF2Q9UNY4 1162 aaKnown RBP9.72□□□□□ -0.85
CCDC40-215ENST00000576033 CLEC11AQ9Y240 323 aa9.72□□□□□ -0.85
CCDC40-215ENST00000576033 AKAP2Q9Y2D5 859 aa9.72□□□□□ -0.85
CCDC40-215ENST00000576033 TRPM7Q96QT4 1865 aa9.72□□□□□ -0.85
CCDC40-215ENST00000576033 OTOFQ9HC10 1997 aa9.72□□□□□ -0.85
CCDC40-215ENST00000576033 CLRN2A0PK11 232 aa9.71□□□□□ -0.86
CCDC40-215ENST00000576033 H7C1D1 291 aa9.71□□□□□ -0.86
CCDC40-215ENST00000576033 TOMM70O94826 608 aa9.71□□□□□ -0.86
CCDC40-215ENST00000576033 RPS12P25398 132 aaKnown RBP9.71□□□□□ -0.86
CCDC40-215ENST00000576033 ZAP70P43403 619 aa9.71□□□□□ -0.86
CCDC40-215ENST00000576033 CACNB3P54284 484 aa9.71□□□□□ -0.86
CCDC40-215ENST00000576033 CFAP100Q494V2 611 aa9.71□□□□□ -0.86
CCDC40-215ENST00000576033 GORABQ5T7V8 394 aa9.71□□□□□ -0.86
CCDC40-215ENST00000576033 ANGEL2Q5VTE6 544 aaKnown RBP9.71□□□□□ -0.86
CCDC40-215ENST00000576033 LDHDQ86WU2 507 aa9.71□□□□□ -0.86
CCDC40-215ENST00000576033 ERC1Q8IUD2 1116 aa9.71□□□□□ -0.86
CCDC40-215ENST00000576033 CDAN1Q8IWY9 1227 aa9.71□□□□□ -0.86
CCDC40-215ENST00000576033 AGBL3Q8NEM8 1001 aa9.71□□□□□ -0.86
CCDC40-215ENST00000576033 DPF2Q92785 391 aa9.71□□□□□ -0.86
CCDC40-215ENST00000576033 LRRCC1Q9C099 1032 aa9.71□□□□□ -0.86
CCDC40-215ENST00000576033 CHMP4BQ9H444 224 aaKnown RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms