RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 MYO3BQ8WXR4 1341 aa16.48■□□□□ 0.23
RPAIN-216ENST00000575599 MS4A1P11836 297 aa16.48■□□□□ 0.23
RPAIN-216ENST00000575599 IL1R1P14778 569 aa16.48■□□□□ 0.23
RPAIN-216ENST00000575599 HIBADHP31937 336 aaKnown RBP16.48■□□□□ 0.23
RPAIN-216ENST00000575599 FAM84BQ96KN1 310 aaPredicted RBP16.48■□□□□ 0.23
RPAIN-216ENST00000575599 COPRSQ9NQ92 184 aa16.48■□□□□ 0.23
RPAIN-216ENST00000575599 FBXO3Q9UK99 471 aa16.48■□□□□ 0.23
RPAIN-216ENST00000575599 PNMA6EA0A0J9YXQ4 647 aa16.47■□□□□ 0.23
RPAIN-216ENST00000575599 IFIT1P09914 478 aaKnown RBP16.47■□□□□ 0.23
RPAIN-216ENST00000575599 IL15P40933 162 aaPredicted RBP16.47■□□□□ 0.23
RPAIN-216ENST00000575599 ZNF280AP59817 542 aaPredicted RBP16.47■□□□□ 0.23
RPAIN-216ENST00000575599 CAVIN4Q5BKX8 364 aa16.47■□□□□ 0.23
RPAIN-216ENST00000575599 KIAA0825Q8IV33 1275 aa16.47■□□□□ 0.23
RPAIN-216ENST00000575599 CEP126Q9P2H0 1117 aa16.47■□□□□ 0.23
RPAIN-216ENST00000575599 TRAF5O00463 557 aa16.46■□□□□ 0.23
RPAIN-216ENST00000575599 ZBTB7BO15156 539 aaPredicted RBP16.46■□□□□ 0.23
RPAIN-216ENST00000575599 SLC5A1P13866 664 aa16.46■□□□□ 0.23
RPAIN-216ENST00000575599 FGFR2P21802 821 aa16.46■□□□□ 0.23
RPAIN-216ENST00000575599 OGFOD1Q8N543 542 aa16.46■□□□□ 0.23
RPAIN-216ENST00000575599 ZC3H15Q8WU90 426 aaKnown RBP16.46■□□□□ 0.23
RPAIN-216ENST00000575599 GLIS2Q9BZE0 524 aaPredicted RBP16.46■□□□□ 0.23
RPAIN-216ENST00000575599 MYOZ2Q9NPC6 264 aa16.46■□□□□ 0.23
RPAIN-216ENST00000575599 IQSEC3Q9UPP2 1182 aaPredicted RBP16.46■□□□□ 0.23
RPAIN-216ENST00000575599 SPDYE2BA6NHP3 402 aa16.45■□□□□ 0.22
RPAIN-216ENST00000575599 SPDYE6P0CI01 402 aa16.45■□□□□ 0.22
RPAIN-216ENST00000575599 FMR1Q06787 632 aaKnown RBP eCLIP16.45■□□□□ 0.22
RPAIN-216ENST00000575599 SPDYE2Q495Y8 402 aa16.45■□□□□ 0.22
RPAIN-216ENST00000575599 TDRD7Q8NHU6 1098 aaKnown RBP16.45■□□□□ 0.22
RPAIN-216ENST00000575599 LPIN2Q92539 896 aa16.45■□□□□ 0.22
RPAIN-216ENST00000575599 COG6Q9Y2V7 657 aa16.45■□□□□ 0.22
RPAIN-216ENST00000575599 ASTN2O75129 1339 aaPredicted RBP16.44■□□□□ 0.22
RPAIN-216ENST00000575599 CEP350Q5VT06 3117 aa16.44■□□□□ 0.22
RPAIN-216ENST00000575599 F8W031 263 aaPredicted RBP16.44■□□□□ 0.22
RPAIN-216ENST00000575599 FRAT2O75474 233 aaPredicted RBP16.44■□□□□ 0.22
RPAIN-216ENST00000575599 BCAMP50895 628 aa16.44■□□□□ 0.22
RPAIN-216ENST00000575599 MVPQ14764 893 aaKnown RBP16.44■□□□□ 0.22
RPAIN-216ENST00000575599 ATP2B3Q16720 1220 aa16.44■□□□□ 0.22
RPAIN-216ENST00000575599 FBXO33Q7Z6M2 555 aa16.44■□□□□ 0.22
RPAIN-216ENST00000575599 CERS5Q8N5B7 392 aa16.44■□□□□ 0.22
RPAIN-216ENST00000575599 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.44■□□□□ 0.22
RPAIN-216ENST00000575599 SPDYE1Q8NFV5 336 aaPredicted RBP16.44■□□□□ 0.22
RPAIN-216ENST00000575599 CREBZFQ9NS37 354 aa16.44■□□□□ 0.22
RPAIN-216ENST00000575599 GGA3Q9NZ52 723 aa16.44■□□□□ 0.22
RPAIN-216ENST00000575599 PGAP2Q9UHJ9 254 aa16.44■□□□□ 0.22
RPAIN-216ENST00000575599 HDAC9Q9UKV0 1011 aa16.44■□□□□ 0.22
RPAIN-216ENST00000575599 TMEM88BA6NKF7 163 aa16.43■□□□□ 0.22
RPAIN-216ENST00000575599 SASH1O94885 1247 aa16.43■□□□□ 0.22
RPAIN-216ENST00000575599 CHAF1AQ13111 956 aaPredicted RBP16.43■□□□□ 0.22
RPAIN-216ENST00000575599 SCARF1Q14162 830 aa16.43■□□□□ 0.22
RPAIN-216ENST00000575599 DCPSQ96C86 337 aaKnown RBP16.43■□□□□ 0.22
RPAIN-216ENST00000575599 ATP8B2P98198 1209 aa16.42■□□□□ 0.22
RPAIN-216ENST00000575599 TFCP2Q12800 502 aa16.42■□□□□ 0.22
RPAIN-216ENST00000575599 MFSD14BQ5SR56 506 aa16.42■□□□□ 0.22
RPAIN-216ENST00000575599 CDC37L1Q7L3B6 337 aa16.42■□□□□ 0.22
RPAIN-216ENST00000575599 USP48Q86UV5 1035 aa16.42■□□□□ 0.22
RPAIN-216ENST00000575599 ZNF408Q9H9D4 720 aa16.42■□□□□ 0.22
RPAIN-216ENST00000575599 DDX19BQ9UMR2 479 aa16.42■□□□□ 0.22
RPAIN-216ENST00000575599 ARAP2Q8WZ64 1704 aa16.42■□□□□ 0.22
RPAIN-216ENST00000575599 FAM205AQ6ZU69 1335 aa16.42■□□□□ 0.22
RPAIN-216ENST00000575599 TRPM7Q96QT4 1865 aa16.41■□□□□ 0.22
RPAIN-216ENST00000575599 ADM5C9JUS6 153 aa16.41■□□□□ 0.22
RPAIN-216ENST00000575599 FKBP1AP62942 108 aaKnown RBP16.41■□□□□ 0.22
RPAIN-216ENST00000575599 G3BP1Q13283 466 aaKnown RBP eCLIP16.41■□□□□ 0.22
RPAIN-216ENST00000575599 C20orf194Q5TEA3 1177 aa16.41■□□□□ 0.22
RPAIN-216ENST00000575599 ANGEL2Q5VTE6 544 aaKnown RBP16.41■□□□□ 0.22
RPAIN-216ENST00000575599 KRT26Q7Z3Y9 468 aa16.41■□□□□ 0.22
RPAIN-216ENST00000575599 MYH13Q9UKX3 1938 aa16.41■□□□□ 0.22
RPAIN-216ENST00000575599 OS9Q13438 667 aaPredicted RBP16.4■□□□□ 0.22
RPAIN-216ENST00000575599 NBPF9Q3BBW0 867 aa16.4■□□□□ 0.22
RPAIN-216ENST00000575599 CEP85Q6P2H3 762 aa16.4■□□□□ 0.22
RPAIN-216ENST00000575599 DLK2Q6UY11 383 aa16.4■□□□□ 0.22
RPAIN-216ENST00000575599 SULF1Q8IWU6 871 aa16.4■□□□□ 0.22
RPAIN-216ENST00000575599 DNAJC5GQ8N7S2 189 aa16.4■□□□□ 0.22
RPAIN-216ENST00000575599 SSH3Q8TE77 659 aa16.4■□□□□ 0.22
RPAIN-216ENST00000575599 KLRG1Q96E93 195 aa16.4■□□□□ 0.22
RPAIN-216ENST00000575599 ABT1Q9ULW3 272 aaKnown RBP16.4■□□□□ 0.22
RPAIN-216ENST00000575599 POLR2AP24928 1970 aaKnown RBP16.4■□□□□ 0.22
RPAIN-216ENST00000575599 WNT10BO00744 389 aa16.39■□□□□ 0.21
RPAIN-216ENST00000575599 CELF2O95319 508 aaKnown RBP16.39■□□□□ 0.21
RPAIN-216ENST00000575599 ADORA1P30542 326 aa16.39■□□□□ 0.21
RPAIN-216ENST00000575599 MKRN1Q9UHC7 482 aaKnown RBP16.39■□□□□ 0.21
RPAIN-216ENST00000575599 SCAF8Q9UPN6 1271 aaKnown RBP16.39■□□□□ 0.21
RPAIN-216ENST00000575599 AKAP2Q9Y2D5 859 aa16.39■□□□□ 0.21
RPAIN-216ENST00000575599 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.39■□□□□ 0.21
RPAIN-216ENST00000575599 A0A1B0GUL7 405 aa16.38■□□□□ 0.21
RPAIN-216ENST00000575599 SURF6O75683 361 aaKnown RBP16.38■□□□□ 0.21
RPAIN-216ENST00000575599 MMP14P50281 582 aa16.38■□□□□ 0.21
RPAIN-216ENST00000575599 TIMM10P62072 90 aa16.38■□□□□ 0.21
RPAIN-216ENST00000575599 PDE3AQ14432 1141 aa16.38■□□□□ 0.21
RPAIN-216ENST00000575599 TTF2Q9UNY4 1162 aaKnown RBP16.38■□□□□ 0.21
RPAIN-216ENST00000575599 COL1A1P02452 1464 aaPredicted RBP16.38■□□□□ 0.21
RPAIN-216ENST00000575599 PHKA1P46020 1223 aa16.38■□□□□ 0.21
RPAIN-216ENST00000575599 RBM5P52756 815 aaKnown RBP eCLIP16.38■□□□□ 0.21
RPAIN-216ENST00000575599 DLGAP5Q15398 846 aa16.38■□□□□ 0.21
RPAIN-216ENST00000575599 CFAP100Q494V2 611 aa16.38■□□□□ 0.21
RPAIN-216ENST00000575599 CST9Q5W186 159 aa16.38■□□□□ 0.21
RPAIN-216ENST00000575599 TBC1D22AQ8WUA7 517 aa16.38■□□□□ 0.21
RPAIN-216ENST00000575599 NEUROD6Q96NK8 337 aa16.38■□□□□ 0.21
RPAIN-216ENST00000575599 GNL3LQ9NVN8 582 aaKnown RBP16.38■□□□□ 0.21
RPAIN-216ENST00000575599 PCDHAC2Q9Y5I4 1007 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms