RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 IQSEC3Q9UPP2 1182 aaPredicted RBP18.75■□□□□ 0.59
LITAF-217ENST00000575426 EXOC6BQ9Y2D4 811 aa18.75■□□□□ 0.59
LITAF-217ENST00000575426 POLR2AP24928 1970 aaKnown RBP18.75■□□□□ 0.59
LITAF-217ENST00000575426 ZNF609O15014 1411 aa18.74■□□□□ 0.59
LITAF-217ENST00000575426 FKBP1AP62942 108 aaKnown RBP18.74■□□□□ 0.59
LITAF-217ENST00000575426 CHAF1AQ13111 956 aaPredicted RBP18.74■□□□□ 0.59
LITAF-217ENST00000575426 RBM26Q5T8P6 1007 aaKnown RBP18.74■□□□□ 0.59
LITAF-217ENST00000575426 SIRT2Q8IXJ6 389 aa18.74■□□□□ 0.59
LITAF-217ENST00000575426 GPR108Q9NPR9 543 aa18.74■□□□□ 0.59
LITAF-217ENST00000575426 JAG2Q9Y219 1238 aa18.74■□□□□ 0.59
LITAF-217ENST00000575426 FAM205AQ6ZU69 1335 aa18.74■□□□□ 0.59
LITAF-217ENST00000575426 TBC1D22AQ8WUA7 517 aa18.73■□□□□ 0.59
LITAF-217ENST00000575426 XAGE2Q96GT9 111 aa18.73■□□□□ 0.59
LITAF-217ENST00000575426 GMLQ99445 158 aa18.73■□□□□ 0.59
LITAF-217ENST00000575426 SHTN1A0MZ66 631 aa18.72■□□□□ 0.59
LITAF-217ENST00000575426 POTEIP0CG38 1075 aa18.72■□□□□ 0.59
LITAF-217ENST00000575426 POTEJP0CG39 1038 aa18.72■□□□□ 0.59
LITAF-217ENST00000575426 ADORA1P30542 326 aa18.72■□□□□ 0.59
LITAF-217ENST00000575426 AAMPQ13685 434 aa18.72■□□□□ 0.59
LITAF-217ENST00000575426 TBC1D10BQ4KMP7 808 aaPredicted RBP18.72■□□□□ 0.59
LITAF-217ENST00000575426 SAMD7Q7Z3H4 446 aa18.72■□□□□ 0.59
LITAF-217ENST00000575426 KIAA0825Q8IV33 1275 aa18.72■□□□□ 0.59
LITAF-217ENST00000575426 ADAMTSL1Q8N6G6 1762 aa18.71■□□□□ 0.59
LITAF-217ENST00000575426 APBB1O00213 710 aa18.71■□□□□ 0.59
LITAF-217ENST00000575426 SEMA3EO15041 775 aa18.71■□□□□ 0.59
LITAF-217ENST00000575426 RAB11FIP3O75154 756 aa18.71■□□□□ 0.59
LITAF-217ENST00000575426 PHKA1P46020 1223 aa18.71■□□□□ 0.59
LITAF-217ENST00000575426 ZNF280AP59817 542 aaPredicted RBP18.71■□□□□ 0.59
LITAF-217ENST00000575426 KIF4BQ2VIQ3 1234 aa18.71■□□□□ 0.59
LITAF-217ENST00000575426 TNNI3KQ59H18 835 aa18.71■□□□□ 0.59
LITAF-217ENST00000575426 MFSD14BQ5SR56 506 aa18.71■□□□□ 0.59
LITAF-217ENST00000575426 CCDC102BQ68D86 513 aa18.71■□□□□ 0.59
LITAF-217ENST00000575426 DENND2AQ9ULE3 1009 aa18.71■□□□□ 0.59
LITAF-217ENST00000575426 FPGT-TNNI3KV9GXZ4 949 aa18.71■□□□□ 0.59
LITAF-217ENST00000575426 WDR66Q8TBY9 1149 aa18.7■□□□□ 0.58
LITAF-217ENST00000575426 ZC3H15Q8WU90 426 aaKnown RBP18.7■□□□□ 0.58
LITAF-217ENST00000575426 KIF1BPQ96EK5 621 aa18.7■□□□□ 0.58
LITAF-217ENST00000575426 MYOZ2Q9NPC6 264 aa18.7■□□□□ 0.58
LITAF-217ENST00000575426 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP18.7■□□□□ 0.58
LITAF-217ENST00000575426 F8W031 263 aaPredicted RBP18.69■□□□□ 0.58
LITAF-217ENST00000575426 CCDC158Q5M9N0 1113 aa18.69■□□□□ 0.58
LITAF-217ENST00000575426 RHPN1Q8TCX5 695 aa18.69■□□□□ 0.58
LITAF-217ENST00000575426 TRPM4Q8TD43 1214 aa18.69■□□□□ 0.58
LITAF-217ENST00000575426 UQCRFS1P1P0C7P4 283 aa18.68■□□□□ 0.58
LITAF-217ENST00000575426 HIRAP54198 1017 aaPredicted RBP18.68■□□□□ 0.58
LITAF-217ENST00000575426 MAP1SQ66K74 1059 aaPredicted RBP18.68■□□□□ 0.58
LITAF-217ENST00000575426 CNTROBQ8N137 903 aa18.68■□□□□ 0.58
LITAF-217ENST00000575426 CLASRPQ8N2M8 674 aaKnown RBP18.68■□□□□ 0.58
LITAF-217ENST00000575426 CERS5Q8N5B7 392 aa18.68■□□□□ 0.58
LITAF-217ENST00000575426 BCL11AQ9H165 835 aa18.68■□□□□ 0.58
LITAF-217ENST00000575426 ECM29Q5VYK3 1845 aa18.67■□□□□ 0.58
LITAF-217ENST00000575426 TTC39AQ5SRH9 613 aa18.67■□□□□ 0.58
LITAF-217ENST00000575426 DCPSQ96C86 337 aaKnown RBP18.67■□□□□ 0.58
LITAF-217ENST00000575426 CCDC8Q9H0W5 538 aaPredicted RBP18.67■□□□□ 0.58
LITAF-217ENST00000575426 IL1RAPL2Q9NP60 686 aa18.67■□□□□ 0.58
LITAF-217ENST00000575426 TTF2Q9UNY4 1162 aaKnown RBP18.67■□□□□ 0.58
LITAF-217ENST00000575426 PCDHB15Q9Y5E8 787 aa18.67■□□□□ 0.58
LITAF-217ENST00000575426 EGFRP00533 1210 aa18.66■□□□□ 0.58
LITAF-217ENST00000575426 RBM5P52756 815 aaKnown RBP eCLIP18.66■□□□□ 0.58
LITAF-217ENST00000575426 SCARF1Q14162 830 aa18.66■□□□□ 0.58
LITAF-217ENST00000575426 DLGAP5Q15398 846 aa18.66■□□□□ 0.58
LITAF-217ENST00000575426 AACSQ86V21 672 aa18.66■□□□□ 0.58
LITAF-217ENST00000575426 ZGPATQ8N5A5 531 aaKnown RBP18.66■□□□□ 0.58
LITAF-217ENST00000575426 EXOC6Q8TAG9 804 aa18.66■□□□□ 0.58
LITAF-217ENST00000575426 EAF2Q96CJ1 260 aaPredicted RBP18.66■□□□□ 0.58
LITAF-217ENST00000575426 DBNDD2Q9BQY9 259 aa18.66■□□□□ 0.58
LITAF-217ENST00000575426 PGAP2Q9UHJ9 254 aa18.66■□□□□ 0.58
LITAF-217ENST00000575426 SUGT1Q9Y2Z0 365 aa18.66■□□□□ 0.58
LITAF-217ENST00000575426 TRPM7Q96QT4 1865 aa18.66■□□□□ 0.58
LITAF-217ENST00000575426 ZBTB22O15209 634 aa18.65■□□□□ 0.58
LITAF-217ENST00000575426 LRRCC1Q9C099 1032 aa18.65■□□□□ 0.58
LITAF-217ENST00000575426 DCTPP1Q9H773 170 aa18.65■□□□□ 0.58
LITAF-217ENST00000575426 MAST3O60307 1309 aa18.65■□□□□ 0.58
LITAF-217ENST00000575426 MYO1BO43795 1136 aa18.64■□□□□ 0.57
LITAF-217ENST00000575426 IFIT2P09913 472 aaKnown RBP18.64■□□□□ 0.57
LITAF-217ENST00000575426 ARID4AP29374 1257 aaPredicted RBP18.64■□□□□ 0.57
LITAF-217ENST00000575426 RASGRF1Q13972 1273 aa18.64■□□□□ 0.57
LITAF-217ENST00000575426 CFAP100Q494V2 611 aa18.64■□□□□ 0.57
LITAF-217ENST00000575426 CDC37L1Q7L3B6 337 aa18.64■□□□□ 0.57
LITAF-217ENST00000575426 AKAP11Q9UKA4 1901 aa18.63■□□□□ 0.57
LITAF-217ENST00000575426 MYH2Q9UKX2 1941 aa18.63■□□□□ 0.57
LITAF-217ENST00000575426 LDHBP07195 334 aaKnown RBP18.63■□□□□ 0.57
LITAF-217ENST00000575426 HSPA6P17066 643 aa18.63■□□□□ 0.57
LITAF-217ENST00000575426 SPTY2D1Q68D10 685 aaPredicted RBP18.63■□□□□ 0.57
LITAF-217ENST00000575426 SPATA5Q8NB90 893 aa18.63■□□□□ 0.57
LITAF-217ENST00000575426 ZBTB47Q9UFB7 747 aaPredicted RBP18.63■□□□□ 0.57
LITAF-217ENST00000575426 SERPINA10Q9UK55 444 aa18.63■□□□□ 0.57
LITAF-217ENST00000575426 PDS5AQ29RF7 1337 aaKnown RBP18.63■□□□□ 0.57
LITAF-217ENST00000575426 WNT10BO00744 389 aa18.62■□□□□ 0.57
LITAF-217ENST00000575426 ITGBL1O95965 494 aaPredicted RBP18.62■□□□□ 0.57
LITAF-217ENST00000575426 IRX6P78412 446 aaPredicted RBP18.62■□□□□ 0.57
LITAF-217ENST00000575426 HDLBPQ00341 1268 aaKnown RBP18.62■□□□□ 0.57
LITAF-217ENST00000575426 NBPF9Q3BBW0 867 aa18.62■□□□□ 0.57
LITAF-217ENST00000575426 SULF1Q8IWU6 871 aa18.62■□□□□ 0.57
LITAF-217ENST00000575426 MTMR14Q8NCE2 650 aa18.62■□□□□ 0.57
LITAF-217ENST00000575426 RWDD1Q9H446 243 aaPredicted RBP18.62■□□□□ 0.57
LITAF-217ENST00000575426 GGA3Q9NZ52 723 aa18.62■□□□□ 0.57
LITAF-217ENST00000575426 ABCF2Q9UG63 623 aa18.62■□□□□ 0.57
LITAF-217ENST00000575426 DBNLQ9UJU6 430 aaKnown RBP18.62■□□□□ 0.57
LITAF-217ENST00000575426 SALL1Q9NSC2 1324 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms