RNA–Protein interactions for RNA: ENST00000574867.5

NUP88-210, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 2,081 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-210ENST00000574867 MX1P20591 662 aa20.89■□□□□ 0.93
NUP88-210ENST00000574867 RASGRF1Q13972 1273 aa20.89■□□□□ 0.93
NUP88-210ENST00000574867 CIAPIN1Q6FI81 312 aa20.89■□□□□ 0.93
NUP88-210ENST00000574867 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.89■□□□□ 0.93
NUP88-210ENST00000574867 IQSEC3Q9UPP2 1182 aaPredicted RBP20.89■□□□□ 0.93
NUP88-210ENST00000574867 CXCL9Q07325 125 aa20.88■□□□□ 0.93
NUP88-210ENST00000574867 C16orf71Q8IYS4 520 aaPredicted RBP20.88■□□□□ 0.93
NUP88-210ENST00000574867 AKAP11Q9UKA4 1901 aa20.88■□□□□ 0.93
NUP88-210ENST00000574867 ZNF541Q9H0D2 1346 aa20.88■□□□□ 0.93
NUP88-210ENST00000574867 RAD17O75943 681 aa20.87■□□□□ 0.93
NUP88-210ENST00000574867 GTF2IP78347 998 aa20.87■□□□□ 0.93
NUP88-210ENST00000574867 TTLL5Q6EMB2 1281 aa20.87■□□□□ 0.93
NUP88-210ENST00000574867 ATP5JP18859 108 aa20.87■□□□□ 0.93
NUP88-210ENST00000574867 MCAMP43121 646 aa20.87■□□□□ 0.93
NUP88-210ENST00000574867 OTUD7AQ8TE49 926 aaPredicted RBP20.87■□□□□ 0.93
NUP88-210ENST00000574867 TBC1D22AQ8WUA7 517 aa20.87■□□□□ 0.93
NUP88-210ENST00000574867 FKBP1AP62942 108 aaKnown RBP20.86■□□□□ 0.93
NUP88-210ENST00000574867 GPC2Q8N158 579 aa20.86■□□□□ 0.93
NUP88-210ENST00000574867 SPATA5Q8NB90 893 aa20.86■□□□□ 0.93
NUP88-210ENST00000574867 WDR66Q8TBY9 1149 aa20.86■□□□□ 0.93
NUP88-210ENST00000574867 FBXW7Q969H0 707 aa20.86■□□□□ 0.93
NUP88-210ENST00000574867 KCNQ5Q9NR82 932 aa20.86■□□□□ 0.93
NUP88-210ENST00000574867 AOX1Q06278 1338 aa20.86■□□□□ 0.93
NUP88-210ENST00000574867 MYO3BQ8WXR4 1341 aa20.86■□□□□ 0.93
NUP88-210ENST00000574867 PSMD14O00487 310 aa20.85■□□□□ 0.93
NUP88-210ENST00000574867 ERC2O15083 957 aa20.85■□□□□ 0.93
NUP88-210ENST00000574867 CHAF1AQ13111 956 aaPredicted RBP20.85■□□□□ 0.93
NUP88-210ENST00000574867 DACT2Q5SW24 774 aa20.85■□□□□ 0.93
NUP88-210ENST00000574867 DPY19L2Q6NUT2 758 aa20.85■□□□□ 0.93
NUP88-210ENST00000574867 HMG20BQ9P0W2 317 aa20.85■□□□□ 0.93
NUP88-210ENST00000574867 STAP2Q9UGK3 403 aa20.85■□□□□ 0.93
NUP88-210ENST00000574867 VIL1P09327 827 aaKnown RBP20.85■□□□□ 0.93
NUP88-210ENST00000574867 SCARF1Q14162 830 aa20.85■□□□□ 0.93
NUP88-210ENST00000574867 SALL1Q9NSC2 1324 aa20.85■□□□□ 0.93
NUP88-210ENST00000574867 GLRX3O76003 335 aaKnown RBP20.84■□□□□ 0.93
NUP88-210ENST00000574867 RPS12P25398 132 aaKnown RBP20.84■□□□□ 0.93
NUP88-210ENST00000574867 PDE1AP54750 535 aa20.84■□□□□ 0.93
NUP88-210ENST00000574867 RSBN1LQ6PCB5 846 aaPredicted RBP20.84■□□□□ 0.93
NUP88-210ENST00000574867 GTF3C3Q9Y5Q9 886 aa20.84■□□□□ 0.93
NUP88-210ENST00000574867 MFSD14BQ5SR56 506 aa20.83■□□□□ 0.93
NUP88-210ENST00000574867 ZGPATQ8N5A5 531 aaKnown RBP20.83■□□□□ 0.93
NUP88-210ENST00000574867 GLTPD2A6NH11 291 aa20.82■□□□□ 0.92
NUP88-210ENST00000574867 PDE4AP27815 886 aa20.82■□□□□ 0.92
NUP88-210ENST00000574867 PI16Q6UXB8 463 aa20.82■□□□□ 0.92
NUP88-210ENST00000574867 PLEKHM2Q8IWE5 1019 aa20.82■□□□□ 0.92
NUP88-210ENST00000574867 AGBL3Q8NEM8 1001 aa20.82■□□□□ 0.92
NUP88-210ENST00000574867 OSBPL3Q9H4L5 887 aa20.82■□□□□ 0.92
NUP88-210ENST00000574867 JAG2Q9Y219 1238 aa20.82■□□□□ 0.92
NUP88-210ENST00000574867 GJA3Q9Y6H8 435 aa20.82■□□□□ 0.92
NUP88-210ENST00000574867 PI4K2BQ8TCG2 481 aa20.82■□□□□ 0.92
NUP88-210ENST00000574867 HAUS7Q99871 368 aa20.82■□□□□ 0.92
NUP88-210ENST00000574867 SUGT1Q9Y2Z0 365 aa20.82■□□□□ 0.92
NUP88-210ENST00000574867 TSHZ3Q63HK5 1081 aa20.81■□□□□ 0.92
NUP88-210ENST00000574867 SNRKQ9NRH2 765 aa20.81■□□□□ 0.92
NUP88-210ENST00000574867 ZAP70P43403 619 aa20.81■□□□□ 0.92
NUP88-210ENST00000574867 BOLA2Q9H3K6 86 aa20.81■□□□□ 0.92
NUP88-210ENST00000574867 DOCK2Q92608 1830 aa20.8■□□□□ 0.92
NUP88-210ENST00000574867 MAST2Q6P0Q8 1798 aa20.8■□□□□ 0.92
NUP88-210ENST00000574867 WDR90Q96KV7 1748 aa20.8■□□□□ 0.92
NUP88-210ENST00000574867 TTF1Q15361 905 aaPredicted RBP20.8■□□□□ 0.92
NUP88-210ENST00000574867 CERS5Q8N5B7 392 aa20.8■□□□□ 0.92
NUP88-210ENST00000574867 DPF2Q92785 391 aa20.8■□□□□ 0.92
NUP88-210ENST00000574867 DNAJC2Q99543 621 aaKnown RBP20.8■□□□□ 0.92
NUP88-210ENST00000574867 IGSF3O75054 1194 aa20.79■□□□□ 0.92
NUP88-210ENST00000574867 DDNO94850 711 aaPredicted RBP20.79■□□□□ 0.92
NUP88-210ENST00000574867 SPTY2D1Q68D10 685 aaPredicted RBP20.79■□□□□ 0.92
NUP88-210ENST00000574867 L3MBTL3Q96JM7 780 aaPredicted RBP20.79■□□□□ 0.92
NUP88-210ENST00000574867 GMLQ99445 158 aa20.79■□□□□ 0.92
NUP88-210ENST00000574867 CYP2E1P05181 493 aaPredicted RBP20.79■□□□□ 0.92
NUP88-210ENST00000574867 GMPSP49915 693 aaPredicted RBP20.79■□□□□ 0.92
NUP88-210ENST00000574867 MMP14P50281 582 aa20.79■□□□□ 0.92
NUP88-210ENST00000574867 ZBTB12Q9Y330 459 aaPredicted RBP20.79■□□□□ 0.92
NUP88-210ENST00000574867 MAST3O60307 1309 aa20.78■□□□□ 0.92
NUP88-210ENST00000574867 MXD3Q9BW11 206 aa20.78■□□□□ 0.92
NUP88-210ENST00000574867 PAG1Q9NWQ8 432 aa20.78■□□□□ 0.92
NUP88-210ENST00000574867 ABCF2Q9UG63 623 aa20.77■□□□□ 0.92
NUP88-210ENST00000574867 SCN4AP35499 1836 aa20.77■□□□□ 0.92
NUP88-210ENST00000574867 LDHBP07195 334 aaKnown RBP20.77■□□□□ 0.92
NUP88-210ENST00000574867 NDUFB9Q9Y6M9 179 aa20.77■□□□□ 0.92
NUP88-210ENST00000574867 GOLIM4O00461 696 aa20.76■□□□□ 0.91
NUP88-210ENST00000574867 LMOD1P29536 600 aaPredicted RBP20.76■□□□□ 0.91
NUP88-210ENST00000574867 SCNN1DP51172 638 aa20.76■□□□□ 0.91
NUP88-210ENST00000574867 KIAA0825Q8IV33 1275 aa20.76■□□□□ 0.91
NUP88-210ENST00000574867 USP17L8P0C7I0 530 aa20.76■□□□□ 0.91
NUP88-210ENST00000574867 PRDX5P30044 214 aa20.76■□□□□ 0.91
NUP88-210ENST00000574867 ERICH6Q7L0X2 663 aa20.76■□□□□ 0.91
NUP88-210ENST00000574867 OGFOD1Q8N543 542 aa20.76■□□□□ 0.91
NUP88-210ENST00000574867 GPRC5DQ9NZD1 345 aa20.76■□□□□ 0.91
NUP88-210ENST00000574867 LRP2BPQ9P2M1 347 aa20.76■□□□□ 0.91
NUP88-210ENST00000574867 HDAC9Q9UKV0 1011 aa20.76■□□□□ 0.91
NUP88-210ENST00000574867 TBC1D9Q6ZT07 1266 aa20.75■□□□□ 0.91
NUP88-210ENST00000574867 PIH1D3Q9NQM4 214 aaKnown RBP20.75■□□□□ 0.91
NUP88-210ENST00000574867 MYO5AQ9Y4I1 1855 aaKnown RBP20.75■□□□□ 0.91
NUP88-210ENST00000574867 TMED8Q6PL24 325 aaPredicted RBP20.74■□□□□ 0.91
NUP88-210ENST00000574867 ANTXR1Q9H6X2 564 aa20.74■□□□□ 0.91
NUP88-210ENST00000574867 TTF2Q9UNY4 1162 aaKnown RBP20.74■□□□□ 0.91
NUP88-210ENST00000574867 IQCA1LA6NCM1 817 aa20.74■□□□□ 0.91
NUP88-210ENST00000574867 DZIP1Q86YF9 867 aaKnown RBP20.74■□□□□ 0.91
NUP88-210ENST00000574867 MICALL2Q8IY33 904 aa20.74■□□□□ 0.91
NUP88-210ENST00000574867 MYH7P12883 1935 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms