RNA–Protein interactions for RNA: ENST00000574109.5

NDE1-209, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-209ENST00000574109 USP17L1Q7RTZ2 530 aa16.59■□□□□ 0.25
NDE1-209ENST00000574109 CHD1LQ86WJ1 897 aa16.59■□□□□ 0.25
NDE1-209ENST00000574109 ZGPATQ8N5A5 531 aaKnown RBP16.59■□□□□ 0.25
NDE1-209ENST00000574109 DBNDD2Q9BQY9 259 aa16.59■□□□□ 0.25
NDE1-209ENST00000574109 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.59■□□□□ 0.25
NDE1-209ENST00000574109 TTC41PQ6P2S7 1318 aa16.59■□□□□ 0.25
NDE1-209ENST00000574109 WTIPA6NIX2 430 aaPredicted RBP16.58■□□□□ 0.24
NDE1-209ENST00000574109 YDJCA8MPS7 323 aa16.58■□□□□ 0.24
NDE1-209ENST00000574109 PHKA1P46020 1223 aa16.58■□□□□ 0.24
NDE1-209ENST00000574109 BCAMP50895 628 aa16.58■□□□□ 0.24
NDE1-209ENST00000574109 WDR66Q8TBY9 1149 aa16.58■□□□□ 0.24
NDE1-209ENST00000574109 SUGT1Q9Y2Z0 365 aa16.58■□□□□ 0.24
NDE1-209ENST00000574109 AOX1Q06278 1338 aa16.58■□□□□ 0.24
NDE1-209ENST00000574109 COL1A1P02452 1464 aaPredicted RBP16.58■□□□□ 0.24
NDE1-209ENST00000574109 MAST3O60307 1309 aa16.57■□□□□ 0.24
NDE1-209ENST00000574109 ZNF541Q9H0D2 1346 aa16.57■□□□□ 0.24
NDE1-209ENST00000574109 SALL1Q9NSC2 1324 aa16.57■□□□□ 0.24
NDE1-209ENST00000574109 ERC2O15083 957 aa16.57■□□□□ 0.24
NDE1-209ENST00000574109 AGBL3Q8NEM8 1001 aa16.57■□□□□ 0.24
NDE1-209ENST00000574109 CCDC8Q9H0W5 538 aaPredicted RBP16.57■□□□□ 0.24
NDE1-209ENST00000574109 TLR7Q9NYK1 1049 aaKnown RBP16.57■□□□□ 0.24
NDE1-209ENST00000574109 MYH2Q9UKX2 1941 aa16.57■□□□□ 0.24
NDE1-209ENST00000574109 MYO5AQ9Y4I1 1855 aaKnown RBP16.56■□□□□ 0.24
NDE1-209ENST00000574109 GLTPD2A6NH11 291 aa16.56■□□□□ 0.24
NDE1-209ENST00000574109 SMARCA5O60264 1052 aaPredicted RBP16.56■□□□□ 0.24
NDE1-209ENST00000574109 VIL1P09327 827 aaKnown RBP16.56■□□□□ 0.24
NDE1-209ENST00000574109 MX1P20591 662 aa16.56■□□□□ 0.24
NDE1-209ENST00000574109 CXCL9Q07325 125 aa16.56■□□□□ 0.24
NDE1-209ENST00000574109 RASGRF1Q13972 1273 aa16.56■□□□□ 0.24
NDE1-209ENST00000574109 TTLL5Q6EMB2 1281 aa16.56■□□□□ 0.24
NDE1-209ENST00000574109 TMED8Q6PL24 325 aaPredicted RBP16.56■□□□□ 0.24
NDE1-209ENST00000574109 L3MBTL3Q96JM7 780 aaPredicted RBP16.56■□□□□ 0.24
NDE1-209ENST00000574109 ECHDC1Q9NTX5 307 aa16.56■□□□□ 0.24
NDE1-209ENST00000574109 SALL3Q9BXA9 1300 aa16.55■□□□□ 0.24
NDE1-209ENST00000574109 RAD17O75943 681 aa16.55■□□□□ 0.24
NDE1-209ENST00000574109 ATP5JP18859 108 aa16.55■□□□□ 0.24
NDE1-209ENST00000574109 GTF2IP78347 998 aa16.55■□□□□ 0.24
NDE1-209ENST00000574109 DACT2Q5SW24 774 aa16.55■□□□□ 0.24
NDE1-209ENST00000574109 RSBN1LQ6PCB5 846 aaPredicted RBP16.55■□□□□ 0.24
NDE1-209ENST00000574109 LNPKQ9C0E8 428 aa16.55■□□□□ 0.24
NDE1-209ENST00000574109 IQCA1LA6NCM1 817 aa16.54■□□□□ 0.24
NDE1-209ENST00000574109 PSMD14O00487 310 aa16.54■□□□□ 0.24
NDE1-209ENST00000574109 GLRX3O76003 335 aaKnown RBP16.54■□□□□ 0.24
NDE1-209ENST00000574109 TTF1Q15361 905 aaPredicted RBP16.54■□□□□ 0.24
NDE1-209ENST00000574109 MFSD14BQ5SR56 506 aa16.54■□□□□ 0.24
NDE1-209ENST00000574109 SPTY2D1Q68D10 685 aaPredicted RBP16.54■□□□□ 0.24
NDE1-209ENST00000574109 B4GALNT3Q6L9W6 998 aa16.54■□□□□ 0.24
NDE1-209ENST00000574109 SPATA5Q8NB90 893 aa16.54■□□□□ 0.24
NDE1-209ENST00000574109 DPF2Q92785 391 aa16.54■□□□□ 0.24
NDE1-209ENST00000574109 FBXW7Q969H0 707 aa16.54■□□□□ 0.24
NDE1-209ENST00000574109 LMOD1P29536 600 aaPredicted RBP16.53■□□□□ 0.24
NDE1-209ENST00000574109 MCAMP43121 646 aa16.53■□□□□ 0.24
NDE1-209ENST00000574109 STAP2Q9UGK3 403 aa16.53■□□□□ 0.24
NDE1-209ENST00000574109 CHAF1AQ13111 956 aaPredicted RBP16.52■□□□□ 0.24
NDE1-209ENST00000574109 HMG20BQ9P0W2 317 aa16.52■□□□□ 0.24
NDE1-209ENST00000574109 HDAC9Q9UKV0 1011 aa16.52■□□□□ 0.24
NDE1-209ENST00000574109 IQSEC3Q9UPP2 1182 aaPredicted RBP16.52■□□□□ 0.24
NDE1-209ENST00000574109 GJA3Q9Y6H8 435 aa16.52■□□□□ 0.24
NDE1-209ENST00000574109 OGFOD1Q8N543 542 aa16.51■□□□□ 0.23
NDE1-209ENST00000574109 HAUS7Q99871 368 aa16.51■□□□□ 0.23
NDE1-209ENST00000574109 OSBPL3Q9H4L5 887 aa16.51■□□□□ 0.23
NDE1-209ENST00000574109 GMPSP49915 693 aaPredicted RBP16.5■□□□□ 0.23
NDE1-209ENST00000574109 PDE1AP54750 535 aa16.5■□□□□ 0.23
NDE1-209ENST00000574109 TICAM2Q86XR7 235 aa16.5■□□□□ 0.23
NDE1-209ENST00000574109 SLF2Q8IX21 1173 aa16.5■□□□□ 0.23
NDE1-209ENST00000574109 GMLQ99445 158 aa16.5■□□□□ 0.23
NDE1-209ENST00000574109 BCL11AQ9H165 835 aa16.5■□□□□ 0.23
NDE1-209ENST00000574109 RFX7Q2KHR2 1363 aa16.5■□□□□ 0.23
NDE1-209ENST00000574109 FOCADQ5VW36 1801 aa16.49■□□□□ 0.23
NDE1-209ENST00000574109 ADAMTSL1Q8N6G6 1762 aa16.49■□□□□ 0.23
NDE1-209ENST00000574109 DDNO94850 711 aaPredicted RBP16.49■□□□□ 0.23
NDE1-209ENST00000574109 LDHBP07195 334 aaKnown RBP16.49■□□□□ 0.23
NDE1-209ENST00000574109 SCNN1DP51172 638 aa16.49■□□□□ 0.23
NDE1-209ENST00000574109 HDLBPQ00341 1268 aaKnown RBP16.49■□□□□ 0.23
NDE1-209ENST00000574109 SCARF1Q14162 830 aa16.49■□□□□ 0.23
NDE1-209ENST00000574109 LRRFIP1Q32MZ4 808 aaKnown RBP16.49■□□□□ 0.23
NDE1-209ENST00000574109 GPRC5DQ9NZD1 345 aa16.49■□□□□ 0.23
NDE1-209ENST00000574109 H7C1D1 291 aa16.48■□□□□ 0.23
NDE1-209ENST00000574109 USP17L8P0C7I0 530 aa16.48■□□□□ 0.23
NDE1-209ENST00000574109 YY1P25490 414 aa16.48■□□□□ 0.23
NDE1-209ENST00000574109 ERICH6Q7L0X2 663 aa16.48■□□□□ 0.23
NDE1-209ENST00000574109 DZIP1Q86YF9 867 aaKnown RBP16.48■□□□□ 0.23
NDE1-209ENST00000574109 PI4K2BQ8TCG2 481 aa16.48■□□□□ 0.23
NDE1-209ENST00000574109 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.48■□□□□ 0.233e-8■■■■□ 21.7
NDE1-209ENST00000574109 KCNQ5Q9NR82 932 aa16.48■□□□□ 0.23
NDE1-209ENST00000574109 PAG1Q9NWQ8 432 aa16.48■□□□□ 0.23
NDE1-209ENST00000574109 HACL1Q9UJ83 578 aa16.48■□□□□ 0.23
NDE1-209ENST00000574109 SERPINA10Q9UK55 444 aa16.48■□□□□ 0.23
NDE1-209ENST00000574109 ZAP70P43403 619 aa16.47■□□□□ 0.23
NDE1-209ENST00000574109 ZNF280AP59817 542 aaPredicted RBP16.47■□□□□ 0.23
NDE1-209ENST00000574109 GSTO1P78417 241 aa16.47■□□□□ 0.23
NDE1-209ENST00000574109 PI16Q6UXB8 463 aa16.47■□□□□ 0.23
NDE1-209ENST00000574109 CERS3Q8IU89 383 aa16.47■□□□□ 0.23
NDE1-209ENST00000574109 PLEKHM2Q8IWE5 1019 aa16.47■□□□□ 0.23
NDE1-209ENST00000574109 MICALL2Q8IY33 904 aa16.47■□□□□ 0.23
NDE1-209ENST00000574109 CERS5Q8N5B7 392 aa16.47■□□□□ 0.23
NDE1-209ENST00000574109 DNAJC2Q99543 621 aaKnown RBP16.47■□□□□ 0.23
NDE1-209ENST00000574109 MRIQ9BWK5 157 aa16.47■□□□□ 0.23
NDE1-209ENST00000574109 BOLA2Q9H3K6 86 aa16.47■□□□□ 0.23
NDE1-209ENST00000574109 ADARB2Q9NS39 739 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 142 ms