RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 XAGE2Q96GT9 111 aa15.71■□□□□ 0.11
TRAPPC1-206ENST00000573989 HDAC9Q9UKV0 1011 aa15.71■□□□□ 0.11
TRAPPC1-206ENST00000573989 FPGT-TNNI3KV9GXZ4 949 aa15.71■□□□□ 0.11
TRAPPC1-206ENST00000573989 ZNF646O15015 1829 aaPredicted RBP15.71■□□□□ 0.1
TRAPPC1-206ENST00000573989 SEMA3EO15041 775 aa15.7■□□□□ 0.1
TRAPPC1-206ENST00000573989 CENPBP07199 599 aaPredicted RBP15.7■□□□□ 0.1
TRAPPC1-206ENST00000573989 USP17L8P0C7I0 530 aa15.7■□□□□ 0.1
TRAPPC1-206ENST00000573989 RBM46Q8TBY0 533 aaKnown RBP15.7■□□□□ 0.1
TRAPPC1-206ENST00000573989 RHPN1Q8TCX5 695 aa15.7■□□□□ 0.1
TRAPPC1-206ENST00000573989 DENND2AQ9ULE3 1009 aa15.7■□□□□ 0.1
TRAPPC1-206ENST00000573989 CLEC11AQ9Y240 323 aa15.7■□□□□ 0.1
TRAPPC1-206ENST00000573989 CCDC158Q5M9N0 1113 aa15.69■□□□□ 0.1
TRAPPC1-206ENST00000573989 MFSD14BQ5SR56 506 aa15.69■□□□□ 0.1
TRAPPC1-206ENST00000573989 CCDC102BQ68D86 513 aa15.69■□□□□ 0.1
TRAPPC1-206ENST00000573989 LDHDQ86WU2 507 aa15.69■□□□□ 0.1
TRAPPC1-206ENST00000573989 CLASRPQ8N2M8 674 aaKnown RBP15.69■□□□□ 0.1
TRAPPC1-206ENST00000573989 SMC1BQ8NDV3 1235 aa15.69■□□□□ 0.1
TRAPPC1-206ENST00000573989 WDR66Q8TBY9 1149 aa15.69■□□□□ 0.1
TRAPPC1-206ENST00000573989 IQSEC3Q9UPP2 1182 aaPredicted RBP15.69■□□□□ 0.1
TRAPPC1-206ENST00000573989 APBB1O00213 710 aa15.68■□□□□ 0.1
TRAPPC1-206ENST00000573989 ZBTB22O15209 634 aa15.68■□□□□ 0.1
TRAPPC1-206ENST00000573989 ADORA1P30542 326 aa15.68■□□□□ 0.1
TRAPPC1-206ENST00000573989 FSTL1Q12841 308 aa15.68■□□□□ 0.1
TRAPPC1-206ENST00000573989 CHAF1AQ13111 956 aaPredicted RBP15.68■□□□□ 0.1
TRAPPC1-206ENST00000573989 GMLQ99445 158 aa15.68■□□□□ 0.1
TRAPPC1-206ENST00000573989 PCDHB15Q9Y5E8 787 aa15.68■□□□□ 0.1
TRAPPC1-206ENST00000573989 UQCRFS1P1P0C7P4 283 aa15.67■□□□□ 0.1
TRAPPC1-206ENST00000573989 PHKA1P46020 1223 aa15.67■□□□□ 0.1
TRAPPC1-206ENST00000573989 KIAA0825Q8IV33 1275 aa15.67■□□□□ 0.1
TRAPPC1-206ENST00000573989 ZGPATQ8N5A5 531 aaKnown RBP15.67■□□□□ 0.1
TRAPPC1-206ENST00000573989 EXOC6Q8TAG9 804 aa15.67■□□□□ 0.1
TRAPPC1-206ENST00000573989 LRRCC1Q9C099 1032 aa15.67■□□□□ 0.1
TRAPPC1-206ENST00000573989 DCTPP1Q9H773 170 aa15.67■□□□□ 0.1
TRAPPC1-206ENST00000573989 JAG2Q9Y219 1238 aa15.67■□□□□ 0.1
TRAPPC1-206ENST00000573989 SUGT1Q9Y2Z0 365 aa15.67■□□□□ 0.1
TRAPPC1-206ENST00000573989 ZNF280AP59817 542 aaPredicted RBP15.66■□□□□ 0.1
TRAPPC1-206ENST00000573989 KIF4BQ2VIQ3 1234 aa15.66■□□□□ 0.1
TRAPPC1-206ENST00000573989 TTC39AQ5SRH9 613 aa15.66■□□□□ 0.1
TRAPPC1-206ENST00000573989 CHADLQ6NUI6 762 aa15.66■□□□□ 0.1
TRAPPC1-206ENST00000573989 AACSQ86V21 672 aa15.66■□□□□ 0.1
TRAPPC1-206ENST00000573989 ZC3H15Q8WU90 426 aaKnown RBP15.66■□□□□ 0.1
TRAPPC1-206ENST00000573989 MXD3Q9BW11 206 aa15.66■□□□□ 0.1
TRAPPC1-206ENST00000573989 MYOZ2Q9NPC6 264 aa15.66■□□□□ 0.1
TRAPPC1-206ENST00000573989 ZBTB47Q9UFB7 747 aaPredicted RBP15.66■□□□□ 0.1
TRAPPC1-206ENST00000573989 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.66■□□□□ 0.1
TRAPPC1-206ENST00000573989 PDS5AQ29RF7 1337 aaKnown RBP15.66■□□□□ 0.1
TRAPPC1-206ENST00000573989 IFIT2P09913 472 aaKnown RBP15.65■□□□□ 0.1
TRAPPC1-206ENST00000573989 TBC1D10BQ4KMP7 808 aaPredicted RBP15.65■□□□□ 0.1
TRAPPC1-206ENST00000573989 RBM26Q5T8P6 1007 aaKnown RBP15.65■□□□□ 0.1
TRAPPC1-206ENST00000573989 SAMD7Q7Z3H4 446 aa15.65■□□□□ 0.1
TRAPPC1-206ENST00000573989 EAF2Q96CJ1 260 aaPredicted RBP15.65■□□□□ 0.1
TRAPPC1-206ENST00000573989 CCDC8Q9H0W5 538 aaPredicted RBP15.65■□□□□ 0.1
TRAPPC1-206ENST00000573989 RWDD1Q9H446 243 aaPredicted RBP15.65■□□□□ 0.1
TRAPPC1-206ENST00000573989 IL1RAPL2Q9NP60 686 aa15.65■□□□□ 0.1
TRAPPC1-206ENST00000573989 MAST3O60307 1309 aa15.65■□□□□ 0.1
TRAPPC1-206ENST00000573989 ADAMTSL1Q8N6G6 1762 aa15.64■□□□□ 0.1
TRAPPC1-206ENST00000573989 SHTN1A0MZ66 631 aa15.64■□□□□ 0.09
TRAPPC1-206ENST00000573989 F8W031 263 aaPredicted RBP15.64■□□□□ 0.09
TRAPPC1-206ENST00000573989 ARID4AP29374 1257 aaPredicted RBP15.64■□□□□ 0.09
TRAPPC1-206ENST00000573989 C1QTNF8P60827 252 aa15.64■□□□□ 0.09
TRAPPC1-206ENST00000573989 HDAC1Q13547 482 aaPredicted RBP15.64■□□□□ 0.09
TRAPPC1-206ENST00000573989 CERS5Q8N5B7 392 aa15.64■□□□□ 0.09
TRAPPC1-206ENST00000573989 TRPM4Q8TD43 1214 aa15.64■□□□□ 0.09
TRAPPC1-206ENST00000573989 GCC1Q96CN9 775 aa15.64■□□□□ 0.09
TRAPPC1-206ENST00000573989 DBNDD2Q9BQY9 259 aa15.64■□□□□ 0.09
TRAPPC1-206ENST00000573989 TTF2Q9UNY4 1162 aaKnown RBP15.64■□□□□ 0.09
TRAPPC1-206ENST00000573989 SALL1Q9NSC2 1324 aa15.64■□□□□ 0.09
TRAPPC1-206ENST00000573989 POTEIP0CG38 1075 aa15.63■□□□□ 0.09
TRAPPC1-206ENST00000573989 POTEJP0CG39 1038 aa15.63■□□□□ 0.09
TRAPPC1-206ENST00000573989 IRX6P78412 446 aaPredicted RBP15.63■□□□□ 0.09
TRAPPC1-206ENST00000573989 RASGRF1Q13972 1273 aa15.63■□□□□ 0.09
TRAPPC1-206ENST00000573989 SPTY2D1Q68D10 685 aaPredicted RBP15.63■□□□□ 0.09
TRAPPC1-206ENST00000573989 ZNF512BQ96KM6 892 aaPredicted RBP15.63■□□□□ 0.09
TRAPPC1-206ENST00000573989 BCL11AQ9H165 835 aa15.63■□□□□ 0.09
TRAPPC1-206ENST00000573989 DBNLQ9UJU6 430 aaKnown RBP15.63■□□□□ 0.09
TRAPPC1-206ENST00000573989 POLR2AP24928 1970 aaKnown RBP15.62■□□□□ 0.09
TRAPPC1-206ENST00000573989 ECM29Q5VYK3 1845 aa15.62■□□□□ 0.09
TRAPPC1-206ENST00000573989 MYO1BO43795 1136 aa15.62■□□□□ 0.09
TRAPPC1-206ENST00000573989 LDHBP07195 334 aaKnown RBP15.62■□□□□ 0.09
TRAPPC1-206ENST00000573989 RBM5P52756 815 aaKnown RBP eCLIP15.62■□□□□ 0.09
TRAPPC1-206ENST00000573989 HDLBPQ00341 1268 aaKnown RBP15.62■□□□□ 0.09
TRAPPC1-206ENST00000573989 DLGAP5Q15398 846 aa15.62■□□□□ 0.09
TRAPPC1-206ENST00000573989 SPATA5Q8NB90 893 aa15.62■□□□□ 0.09
TRAPPC1-206ENST00000573989 DCPSQ96C86 337 aaKnown RBP15.62■□□□□ 0.09
TRAPPC1-206ENST00000573989 SERPINA10Q9UK55 444 aa15.62■□□□□ 0.09
TRAPPC1-206ENST00000573989 HIRAP54198 1017 aaPredicted RBP15.61■□□□□ 0.09
TRAPPC1-206ENST00000573989 SCARF1Q14162 830 aa15.61■□□□□ 0.09
TRAPPC1-206ENST00000573989 SLF2Q8IX21 1173 aa15.61■□□□□ 0.09
TRAPPC1-206ENST00000573989 CNTROBQ8N137 903 aa15.61■□□□□ 0.09
TRAPPC1-206ENST00000573989 MTMR14Q8NCE2 650 aa15.61■□□□□ 0.09
TRAPPC1-206ENST00000573989 MRIQ9BWK5 157 aa15.61■□□□□ 0.09
TRAPPC1-206ENST00000573989 ABCF2Q9UG63 623 aa15.61■□□□□ 0.09
TRAPPC1-206ENST00000573989 PGAP2Q9UHJ9 254 aa15.61■□□□□ 0.09
TRAPPC1-206ENST00000573989 NEFLP07196 543 aa15.6■□□□□ 0.09
TRAPPC1-206ENST00000573989 MCAMP43121 646 aa15.6■□□□□ 0.09
TRAPPC1-206ENST00000573989 CFAP100Q494V2 611 aa15.6■□□□□ 0.09
TRAPPC1-206ENST00000573989 CDC37L1Q7L3B6 337 aa15.6■□□□□ 0.09
TRAPPC1-206ENST00000573989 TEKT1Q969V4 418 aa15.6■□□□□ 0.09
TRAPPC1-206ENST00000573989 GPATCH3Q96I76 525 aa15.6■□□□□ 0.09
TRAPPC1-206ENST00000573989 TLR7Q9NYK1 1049 aaKnown RBP15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms