RNA–Protein interactions for RNA: ENST00000573203.5

NDE1-207, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 762 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-207ENST00000573203 PGAP2Q9UHJ9 254 aa11.38□□□□□ -0.59
NDE1-207ENST00000573203 ZNF609O15014 1411 aa11.37□□□□□ -0.59
NDE1-207ENST00000573203 IPO8O15397 1037 aaKnown RBP11.37□□□□□ -0.59
NDE1-207ENST00000573203 EGFRP00533 1210 aa11.37□□□□□ -0.59
NDE1-207ENST00000573203 UBTFL1P0CB47 393 aaPredicted RBP11.37□□□□□ -0.59
NDE1-207ENST00000573203 FMR1Q06787 632 aaKnown RBP eCLIP11.37□□□□□ -0.59
NDE1-207ENST00000573203 STRIP1Q5VSL9 837 aa11.37□□□□□ -0.59
NDE1-207ENST00000573203 TTLL5Q6EMB2 1281 aa11.37□□□□□ -0.59
NDE1-207ENST00000573203 C15orf52Q6ZUT6 534 aaKnown RBP11.37□□□□□ -0.59
NDE1-207ENST00000573203 CDC37L1Q7L3B6 337 aa11.37□□□□□ -0.59
NDE1-207ENST00000573203 JMYQ8N9B5 988 aa11.37□□□□□ -0.59
NDE1-207ENST00000573203 ARHGAP45Q92619 1136 aa11.37□□□□□ -0.59
NDE1-207ENST00000573203 GMLQ99445 158 aa11.37□□□□□ -0.59
NDE1-207ENST00000573203 GLIS2Q9BZE0 524 aaPredicted RBP11.37□□□□□ -0.59
NDE1-207ENST00000573203 PUS3Q9BZE2 481 aaKnown RBP11.37□□□□□ -0.59
NDE1-207ENST00000573203 CD209Q9NNX6 404 aa11.37□□□□□ -0.59
NDE1-207ENST00000573203 METRNQ9UJH8 293 aa11.37□□□□□ -0.59
NDE1-207ENST00000573203 ABT1Q9ULW3 272 aaKnown RBP11.37□□□□□ -0.59
NDE1-207ENST00000573203 ZNF646O15015 1829 aaPredicted RBP11.37□□□□□ -0.59
NDE1-207ENST00000573203 BCAR3O75815 825 aa11.36□□□□□ -0.59
NDE1-207ENST00000573203 USP17L8P0C7I0 530 aa11.36□□□□□ -0.59
NDE1-207ENST00000573203 ZNF280AP59817 542 aaPredicted RBP11.36□□□□□ -0.59
NDE1-207ENST00000573203 GTF2IP78347 998 aa11.36□□□□□ -0.59
NDE1-207ENST00000573203 DACT2Q5SW24 774 aa11.36□□□□□ -0.59
NDE1-207ENST00000573203 ZNF804AQ7Z570 1209 aa11.36□□□□□ -0.59
NDE1-207ENST00000573203 FRAT1Q92837 279 aaPredicted RBP11.36□□□□□ -0.59
NDE1-207ENST00000573203 DCPSQ96C86 337 aaKnown RBP11.36□□□□□ -0.59
NDE1-207ENST00000573203 MXD3Q9BW11 206 aa11.36□□□□□ -0.59
NDE1-207ENST00000573203 HDAC5Q9UQL6 1122 aa11.36□□□□□ -0.59
NDE1-207ENST00000573203 RIPOR2Q9Y4F9 1068 aa11.36□□□□□ -0.59
NDE1-207ENST00000573203 CNTNAP1P78357 1384 aa11.36□□□□□ -0.59
NDE1-207ENST00000573203 MROH5Q6ZUA9 1318 aa11.35□□□□□ -0.59
NDE1-207ENST00000573203 MYO3BQ8WXR4 1341 aa11.35□□□□□ -0.59
NDE1-207ENST00000573203 CELF2O95319 508 aaKnown RBP11.35□□□□□ -0.59
NDE1-207ENST00000573203 PDAP1Q13442 181 aaKnown RBP11.35□□□□□ -0.59
NDE1-207ENST00000573203 UBE4AQ14139 1066 aa11.35□□□□□ -0.59
NDE1-207ENST00000573203 DEFB115Q30KQ5 88 aa11.35□□□□□ -0.59
NDE1-207ENST00000573203 METTL24Q5JXM2 366 aa11.35□□□□□ -0.59
NDE1-207ENST00000573203 KRT26Q7Z3Y9 468 aa11.35□□□□□ -0.59
NDE1-207ENST00000573203 USP48Q86UV5 1035 aa11.35□□□□□ -0.59
NDE1-207ENST00000573203 OGFOD1Q8N543 542 aa11.35□□□□□ -0.59
NDE1-207ENST00000573203 ZNF408Q9H9D4 720 aa11.35□□□□□ -0.59
NDE1-207ENST00000573203 MYOZ2Q9NPC6 264 aa11.35□□□□□ -0.59
NDE1-207ENST00000573203 IRS2Q9Y4H2 1338 aa11.35□□□□□ -0.59
NDE1-207ENST00000573203 LRRC24Q50LG9 513 aa11.34□□□□□ -0.59
NDE1-207ENST00000573203 CST9Q5W186 159 aa11.34□□□□□ -0.59
NDE1-207ENST00000573203 INTS3Q68E01 1043 aaKnown RBP11.34□□□□□ -0.59
NDE1-207ENST00000573203 KLHDC4Q8TBB5 520 aa11.34□□□□□ -0.59
NDE1-207ENST00000573203 GGA3Q9NZ52 723 aa11.34□□□□□ -0.59
NDE1-207ENST00000573203 LRRFIP2Q9Y608 721 aaKnown RBP11.34□□□□□ -0.59
NDE1-207ENST00000573203 RASSF10A6NK89 507 aa11.33□□□□□ -0.6
NDE1-207ENST00000573203 GNAI3P08754 354 aa11.33□□□□□ -0.6
NDE1-207ENST00000573203 TRIM27P14373 513 aa11.33□□□□□ -0.6
NDE1-207ENST00000573203 IL1R1P14778 569 aa11.33□□□□□ -0.6
NDE1-207ENST00000573203 VEGFBP49765 207 aa11.33□□□□□ -0.6
NDE1-207ENST00000573203 SCARF1Q14162 830 aa11.33□□□□□ -0.6
NDE1-207ENST00000573203 ATF7IPQ6VMQ6 1270 aa11.33□□□□□ -0.6
NDE1-207ENST00000573203 PAXIP1Q6ZW49 1069 aaPredicted RBP11.33□□□□□ -0.6
NDE1-207ENST00000573203 SULF1Q8IWU6 871 aa11.33□□□□□ -0.6
NDE1-207ENST00000573203 CLUAP1Q96AJ1 413 aa11.33□□□□□ -0.6
NDE1-207ENST00000573203 MEIS3Q99687 375 aa11.33□□□□□ -0.6
NDE1-207ENST00000573203 HDAC9Q9UKV0 1011 aa11.33□□□□□ -0.6
NDE1-207ENST00000573203 PCNTO95613 3336 aa11.33□□□□□ -0.6
NDE1-207ENST00000573203 ASTN2O75129 1339 aaPredicted RBP11.33□□□□□ -0.6
NDE1-207ENST00000573203 ADM5C9JUS6 153 aa11.32□□□□□ -0.6
NDE1-207ENST00000573203 PDE8BO95263 885 aa11.32□□□□□ -0.6
NDE1-207ENST00000573203 NEFLP07196 543 aa11.32□□□□□ -0.6
NDE1-207ENST00000573203 HIBADHP31937 336 aaKnown RBP11.32□□□□□ -0.6
NDE1-207ENST00000573203 GYG1P46976 350 aa11.32□□□□□ -0.6
NDE1-207ENST00000573203 RFX5P48382 616 aaPredicted RBP11.32□□□□□ -0.6
NDE1-207ENST00000573203 PSEN1P49768 467 aa11.32□□□□□ -0.6
NDE1-207ENST00000573203 MMP14P50281 582 aa11.32□□□□□ -0.6
NDE1-207ENST00000573203 PTPN12Q05209 780 aaKnown RBP11.32□□□□□ -0.6
NDE1-207ENST00000573203 ANGEL2Q5VTE6 544 aaKnown RBP11.32□□□□□ -0.6
NDE1-207ENST00000573203 ZKSCAN2Q63HK3 967 aa11.32□□□□□ -0.6
NDE1-207ENST00000573203 VPS37DQ86XT2 251 aa11.32□□□□□ -0.6
NDE1-207ENST00000573203 KIAA0825Q8IV33 1275 aa11.32□□□□□ -0.6
NDE1-207ENST00000573203 TNNQ9UQP3 1299 aa11.32□□□□□ -0.6
NDE1-207ENST00000573203 TLL2Q9Y6L7 1015 aa11.32□□□□□ -0.6
NDE1-207ENST00000573203 EYA2O00167 538 aa11.31□□□□□ -0.6
NDE1-207ENST00000573203 HSPA1AP0DMV8 641 aaKnown RBP11.31□□□□□ -0.6
NDE1-207ENST00000573203 HSPA1BP0DMV9 641 aaKnown RBP11.31□□□□□ -0.6
NDE1-207ENST00000573203 GRM1Q13255 1194 aa11.31□□□□□ -0.6
NDE1-207ENST00000573203 CAVIN4Q5BKX8 364 aa11.31□□□□□ -0.6
NDE1-207ENST00000573203 DLK2Q6UY11 383 aa11.31□□□□□ -0.6
NDE1-207ENST00000573203 FAM84BQ96KN1 310 aaPredicted RBP11.31□□□□□ -0.6
NDE1-207ENST00000573203 SIL1Q9H173 461 aa11.31□□□□□ -0.6
NDE1-207ENST00000573203 JAG2Q9Y219 1238 aa11.31□□□□□ -0.6
NDE1-207ENST00000573203 SUPT16HQ9Y5B9 1047 aaKnown RBP11.31□□□□□ -0.6
NDE1-207ENST00000573203 PITPNM2Q9BZ72 1349 aa11.31□□□□□ -0.6
NDE1-207ENST00000573203 WDR33Q9C0J8 1336 aaKnown RBP11.31□□□□□ -0.6
NDE1-207ENST00000573203 F8W031 263 aaPredicted RBP11.3□□□□□ -0.6
NDE1-207ENST00000573203 WNT10BO00744 389 aa11.3□□□□□ -0.6
NDE1-207ENST00000573203 FRAT2O75474 233 aaPredicted RBP11.3□□□□□ -0.6
NDE1-207ENST00000573203 SASH1O94885 1247 aa11.3□□□□□ -0.6
NDE1-207ENST00000573203 IFIT1P09914 478 aaKnown RBP11.3□□□□□ -0.6
NDE1-207ENST00000573203 ECE1P42892 770 aa11.3□□□□□ -0.6
NDE1-207ENST00000573203 FKBP1AP62942 108 aaKnown RBP11.3□□□□□ -0.6
NDE1-207ENST00000573203 PUM3Q15397 648 aaKnown RBP11.3□□□□□ -0.6
NDE1-207ENST00000573203 NBPF9Q3BBW0 867 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms