RNA–Protein interactions for RNA: ENST00000573169.1

NUP88-206, Transcript of nucleoporin 88, humanhuman

TSL 1 (best)

Gene NUP88, Length 1,195 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-206ENST00000573169 PPIP5K2O43314 1243 aa8.09□□□□□ -1.11
NUP88-206ENST00000573169 OFD1O75665 1012 aa8.09□□□□□ -1.11
NUP88-206ENST00000573169 TRIM27P14373 513 aa8.09□□□□□ -1.11
NUP88-206ENST00000573169 EPS15P42566 896 aa8.09□□□□□ -1.11
NUP88-206ENST00000573169 ZNF445P59923 1031 aa8.09□□□□□ -1.11
NUP88-206ENST00000573169 KLHL40Q2TBA0 621 aa8.09□□□□□ -1.11
NUP88-206ENST00000573169 ARSIQ5FYB1 569 aa8.09□□□□□ -1.11
NUP88-206ENST00000573169 HDGFL1Q5TGJ6 251 aa8.09□□□□□ -1.11
NUP88-206ENST00000573169 GAS2L3Q86XJ1 694 aa8.09□□□□□ -1.11
NUP88-206ENST00000573169 CNTROBQ8N137 903 aa8.09□□□□□ -1.11
NUP88-206ENST00000573169 ARHGAP45Q92619 1136 aa8.09□□□□□ -1.11
NUP88-206ENST00000573169 FBXW7Q969H0 707 aa8.09□□□□□ -1.11
NUP88-206ENST00000573169 PKNOX2Q96KN3 472 aa8.09□□□□□ -1.11
NUP88-206ENST00000573169 MBIPQ9NS73 344 aa8.09□□□□□ -1.11
NUP88-206ENST00000573169 ATP6V0A2Q9Y487 856 aa8.09□□□□□ -1.11
NUP88-206ENST00000573169 LAMB2P55268 1798 aa8.08□□□□□ -1.12
NUP88-206ENST00000573169 ADAMTSL1Q8N6G6 1762 aa8.08□□□□□ -1.12
NUP88-206ENST00000573169 ELL2O00472 640 aaPredicted RBP8.08□□□□□ -1.12
NUP88-206ENST00000573169 NUDT7P0C024 238 aa8.08□□□□□ -1.12
NUP88-206ENST00000573169 OSBPP22059 807 aa8.08□□□□□ -1.12
NUP88-206ENST00000573169 SCNN1DP51172 638 aa8.08□□□□□ -1.12
NUP88-206ENST00000573169 HSP90AB3PQ58FF7 597 aa8.08□□□□□ -1.12
NUP88-206ENST00000573169 TYW1BQ6NUM6 668 aa8.08□□□□□ -1.12
NUP88-206ENST00000573169 ZSCAN30Q86W11 494 aa8.08□□□□□ -1.12
NUP88-206ENST00000573169 NIM1KQ8IY84 436 aa8.08□□□□□ -1.12
NUP88-206ENST00000573169 GCC1Q96CN9 775 aa8.08□□□□□ -1.12
NUP88-206ENST00000573169 FAM89AQ96GI7 184 aa8.08□□□□□ -1.12
NUP88-206ENST00000573169 MAP7D2Q96T17 732 aa8.08□□□□□ -1.12
NUP88-206ENST00000573169 CNTNAP1P78357 1384 aa8.08□□□□□ -1.12
NUP88-206ENST00000573169 COL4A1P02462 1669 aa8.08□□□□□ -1.12
NUP88-206ENST00000573169 ANKRD36CQ5JPF3 1778 aa8.07□□□□□ -1.12
NUP88-206ENST00000573169 SH3TC1Q8TE82 1336 aa8.07□□□□□ -1.12
NUP88-206ENST00000573169 TAF1P21675 1872 aa8.07□□□□□ -1.12
NUP88-206ENST00000573169 POTEB3A0JP26 581 aa8.07□□□□□ -1.12
NUP88-206ENST00000573169 TMEM88BA6NKF7 163 aa8.07□□□□□ -1.12
NUP88-206ENST00000573169 K7ELQ4 463 aaPredicted RBP8.07□□□□□ -1.12
NUP88-206ENST00000573169 ZNF500O60304 480 aaPredicted RBP8.07□□□□□ -1.12
NUP88-206ENST00000573169 BBOX1O75936 387 aa8.07□□□□□ -1.12
NUP88-206ENST00000573169 CYP2E1P05181 493 aaPredicted RBP8.07□□□□□ -1.12
NUP88-206ENST00000573169 MCM5P33992 734 aa8.07□□□□□ -1.12
NUP88-206ENST00000573169 VEGFBP49765 207 aa8.07□□□□□ -1.12
NUP88-206ENST00000573169 MFAP1P55081 439 aaKnown RBP8.07□□□□□ -1.12
NUP88-206ENST00000573169 CXCL9Q07325 125 aa8.07□□□□□ -1.12
NUP88-206ENST00000573169 GRAPQ13588 217 aa8.07□□□□□ -1.12
NUP88-206ENST00000573169 POTEBQ6S5H4 581 aa8.07□□□□□ -1.12
NUP88-206ENST00000573169 DPP8Q6V1X1 898 aaPredicted RBP8.07□□□□□ -1.12
NUP88-206ENST00000573169 ANKRD13DQ6ZTN6 518 aa8.07□□□□□ -1.12
NUP88-206ENST00000573169 DDX46Q7L014 1031 aaKnown RBP8.07□□□□□ -1.12
NUP88-206ENST00000573169 PNMA8AQ86V59 439 aaPredicted RBP8.07□□□□□ -1.12
NUP88-206ENST00000573169 CHD1LQ86WJ1 897 aa8.07□□□□□ -1.12
NUP88-206ENST00000573169 SP8Q8IXZ3 490 aa8.07□□□□□ -1.12
NUP88-206ENST00000573169 FTSJ3Q8IY81 847 aaKnown RBP8.07□□□□□ -1.12
NUP88-206ENST00000573169 TNS4Q8IZW8 715 aa8.07□□□□□ -1.12
NUP88-206ENST00000573169 MPNDQ8N594 471 aa8.07□□□□□ -1.12
NUP88-206ENST00000573169 PLBD2Q8NHP8 589 aa8.07□□□□□ -1.12
NUP88-206ENST00000573169 GRAPLQ8TC17 118 aaPredicted RBP8.07□□□□□ -1.12
NUP88-206ENST00000573169 SSH1Q8WYL5 1049 aa8.07□□□□□ -1.12
NUP88-206ENST00000573169 JARID2Q92833 1246 aaPredicted RBP8.07□□□□□ -1.12
NUP88-206ENST00000573169 CELF1Q92879 486 aaKnown RBP8.07□□□□□ -1.12
NUP88-206ENST00000573169 PDLIM2Q96JY6 352 aa8.07□□□□□ -1.12
NUP88-206ENST00000573169 ISCA1Q9BUE6 129 aa8.07□□□□□ -1.12
NUP88-206ENST00000573169 PHAXQ9H814 394 aaKnown RBP8.07□□□□□ -1.12
NUP88-206ENST00000573169 SHTN1A0MZ66 631 aa8.06□□□□□ -1.12
NUP88-206ENST00000573169 TRAF5O00463 557 aa8.06□□□□□ -1.12
NUP88-206ENST00000573169 FOXN1O15353 648 aa8.06□□□□□ -1.12
NUP88-206ENST00000573169 RAD17O75943 681 aa8.06□□□□□ -1.12
NUP88-206ENST00000573169 ZNF853P0CG23 659 aa8.06□□□□□ -1.12
NUP88-206ENST00000573169 LMOD1P29536 600 aaPredicted RBP8.06□□□□□ -1.12
NUP88-206ENST00000573169 GMPSP49915 693 aaPredicted RBP8.06□□□□□ -1.12
NUP88-206ENST00000573169 GRIPAP1Q4V328 841 aa8.06□□□□□ -1.12
NUP88-206ENST00000573169 GPR153Q6NV75 609 aa8.06□□□□□ -1.12
NUP88-206ENST00000573169 C8orf58Q8NAV2 365 aa8.06□□□□□ -1.12
NUP88-206ENST00000573169 TRIM44Q96DX7 344 aaPredicted RBP8.06□□□□□ -1.12
NUP88-206ENST00000573169 GPR101Q96P66 508 aaPredicted RBP8.06□□□□□ -1.12
NUP88-206ENST00000573169 RTFDC1Q9BY42 306 aaPredicted RBP8.06□□□□□ -1.12
NUP88-206ENST00000573169 ZMYND15Q9H091 742 aa8.06□□□□□ -1.12
NUP88-206ENST00000573169 TMX4Q9H1E5 349 aaPredicted RBP8.06□□□□□ -1.12
NUP88-206ENST00000573169 DBF4Q9UBU7 674 aaPredicted RBP8.06□□□□□ -1.12
NUP88-206ENST00000573169 ZNRF3Q9ULT6 936 aa8.06□□□□□ -1.12
NUP88-206ENST00000573169 YDJCA8MPS7 323 aa8.05□□□□□ -1.12
NUP88-206ENST00000573169 MAP3K7O43318 606 aa8.05□□□□□ -1.12
NUP88-206ENST00000573169 HOXB7P09629 217 aa8.05□□□□□ -1.12
NUP88-206ENST00000573169 GPSM2P81274 684 aa8.05□□□□□ -1.12
NUP88-206ENST00000573169 CALD1Q05682 793 aaKnown RBP8.05□□□□□ -1.12
NUP88-206ENST00000573169 EXOSC9Q06265 439 aaKnown RBP8.05□□□□□ -1.12
NUP88-206ENST00000573169 DEFB115Q30KQ5 88 aa8.05□□□□□ -1.12
NUP88-206ENST00000573169 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.05□□□□□ -1.12
NUP88-206ENST00000573169 RIC3Q7Z5B4 369 aa8.05□□□□□ -1.12
NUP88-206ENST00000573169 TMEM57Q8N5G2 664 aa8.05□□□□□ -1.12
NUP88-206ENST00000573169 ZNF454Q8N9F8 522 aa8.05□□□□□ -1.12
NUP88-206ENST00000573169 SUPT20HQ8NEM7 779 aa8.05□□□□□ -1.12
NUP88-206ENST00000573169 GZF1Q9H116 711 aaPredicted RBP8.05□□□□□ -1.12
NUP88-206ENST00000573169 SMC4Q9NTJ3 1288 aa8.05□□□□□ -1.12
NUP88-206ENST00000573169 HYPKQ9NX55 129 aa8.05□□□□□ -1.12
NUP88-206ENST00000573169 GPRC5DQ9NZD1 345 aa8.05□□□□□ -1.12
NUP88-206ENST00000573169 ABT1Q9ULW3 272 aaKnown RBP8.05□□□□□ -1.12
NUP88-206ENST00000573169 DDX60Q8IY21 1712 aaKnown RBP8.05□□□□□ -1.12
NUP88-206ENST00000573169 DUOX1Q9NRD9 1551 aa8.05□□□□□ -1.12
NUP88-206ENST00000573169 PCNTO95613 3336 aa8.04□□□□□ -1.12
NUP88-206ENST00000573169 GOLGA6L22H0YM25 854 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms