RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 OPLAHO14841 1288 aa6.14□□□□□ -1.43
TOPBP1-210ENST00000572787 FIBPO43427 364 aa6.14□□□□□ -1.43
TOPBP1-210ENST00000572787 RRM1P23921 792 aa6.14□□□□□ -1.43
TOPBP1-210ENST00000572787 ATP6V1AP38606 617 aa6.14□□□□□ -1.43
TOPBP1-210ENST00000572787 HALP42357 657 aa6.14□□□□□ -1.43
TOPBP1-210ENST00000572787 FUT2Q10981 343 aa6.14□□□□□ -1.43
TOPBP1-210ENST00000572787 PERM1Q5SV97 790 aa6.14□□□□□ -1.43
TOPBP1-210ENST00000572787 C1QTNF12Q5T7M4 302 aa6.14□□□□□ -1.43
TOPBP1-210ENST00000572787 PDXDC1Q6P996 788 aa6.14□□□□□ -1.43
TOPBP1-210ENST00000572787 DDX46Q7L014 1031 aaKnown RBP6.14□□□□□ -1.43
TOPBP1-210ENST00000572787 MORC1Q86VD1 984 aa6.14□□□□□ -1.43
TOPBP1-210ENST00000572787 PACS2Q86VP3 889 aa6.14□□□□□ -1.43
TOPBP1-210ENST00000572787 IFNL2Q8IZJ0 200 aa6.14□□□□□ -1.43
TOPBP1-210ENST00000572787 ZNF454Q8N9F8 522 aa6.14□□□□□ -1.43
TOPBP1-210ENST00000572787 EAF1Q96JC9 268 aaPredicted RBP6.14□□□□□ -1.43
TOPBP1-210ENST00000572787 NOC4LQ9BVI4 516 aaKnown RBP6.14□□□□□ -1.43
TOPBP1-210ENST00000572787 ADAM33Q9BZ11 813 aa6.14□□□□□ -1.43
TOPBP1-210ENST00000572787 FAM13BQ9NYF5 915 aa6.14□□□□□ -1.43
TOPBP1-210ENST00000572787 KDM2BQ8NHM5 1336 aa6.14□□□□□ -1.43
TOPBP1-210ENST00000572787 A0A087X0B3 334 aa6.13□□□□□ -1.43
TOPBP1-210ENST00000572787 A0A1W2PRQ8 180 aa6.13□□□□□ -1.43
TOPBP1-210ENST00000572787 GOLGA8CPA6NN73 597 aa6.13□□□□□ -1.43
TOPBP1-210ENST00000572787 C3orf80F5H4A9 247 aa6.13□□□□□ -1.43
TOPBP1-210ENST00000572787 ORC4O43929 436 aa6.13□□□□□ -1.43
TOPBP1-210ENST00000572787 KATNA1O75449 491 aa6.13□□□□□ -1.43
TOPBP1-210ENST00000572787 U2AF1L5P0DN76 240 aaPredicted RBP6.13□□□□□ -1.43
TOPBP1-210ENST00000572787 BCAMP50895 628 aa6.13□□□□□ -1.43
TOPBP1-210ENST00000572787 NEK3P51956 506 aa6.13□□□□□ -1.43
TOPBP1-210ENST00000572787 U2AF1Q01081 240 aaKnown RBP eCLIP6.13□□□□□ -1.43
TOPBP1-210ENST00000572787 AKAP4Q5JQC9 854 aa6.13□□□□□ -1.43
TOPBP1-210ENST00000572787 MSL1Q68DK7 614 aa6.13□□□□□ -1.43
TOPBP1-210ENST00000572787 IL31Q6EBC2 164 aa6.13□□□□□ -1.43
TOPBP1-210ENST00000572787 RELL1Q8IUW5 271 aa6.13□□□□□ -1.43
TOPBP1-210ENST00000572787 ZSWIM2Q8NEG5 633 aa6.13□□□□□ -1.43
TOPBP1-210ENST00000572787 PJA1Q8NG27 643 aa6.13□□□□□ -1.43
TOPBP1-210ENST00000572787 ADAM32Q8TC27 787 aa6.13□□□□□ -1.43
TOPBP1-210ENST00000572787 TRMT2BQ96GJ1 504 aaKnown RBP6.13□□□□□ -1.43
TOPBP1-210ENST00000572787 STRBPQ96SI9 672 aaKnown RBP6.13□□□□□ -1.43
TOPBP1-210ENST00000572787 KCNK17Q96T54 332 aa6.13□□□□□ -1.43
TOPBP1-210ENST00000572787 OCSTAMPQ9BR26 566 aa6.13□□□□□ -1.43
TOPBP1-210ENST00000572787 NT5C1AQ9BXI3 368 aa6.13□□□□□ -1.43
TOPBP1-210ENST00000572787 SRCIN1Q9C0H9 1055 aa6.13□□□□□ -1.43
TOPBP1-210ENST00000572787 ALDH8A1Q9H2A2 487 aaPredicted RBP6.13□□□□□ -1.43
TOPBP1-210ENST00000572787 ST7Q9NRC1 585 aa6.13□□□□□ -1.43
TOPBP1-210ENST00000572787 AASDHPPTQ9NRN7 309 aa6.13□□□□□ -1.43
TOPBP1-210ENST00000572787 C9orf78Q9NZ63 289 aaPredicted RBP6.13□□□□□ -1.43
TOPBP1-210ENST00000572787 NOB1Q9ULX3 412 aaKnown RBP6.13□□□□□ -1.43
TOPBP1-210ENST00000572787 MAPK8IP1Q9UQF2 711 aa6.13□□□□□ -1.43
TOPBP1-210ENST00000572787 CHMP3Q9Y3E7 222 aa6.13□□□□□ -1.43
TOPBP1-210ENST00000572787 ATAD2Q6PL18 1390 aa6.13□□□□□ -1.43
TOPBP1-210ENST00000572787 ANO9A1A5B4 782 aa6.12□□□□□ -1.43
TOPBP1-210ENST00000572787 KLRG2A4D1S0 409 aaPredicted RBP6.12□□□□□ -1.43
TOPBP1-210ENST00000572787 PDE8AO60658 829 aa6.12□□□□□ -1.43
TOPBP1-210ENST00000572787 CPNE3O75131 537 aaKnown RBP6.12□□□□□ -1.43
TOPBP1-210ENST00000572787 RFPL1O75677 317 aa6.12□□□□□ -1.43
TOPBP1-210ENST00000572787 RPN1P04843 607 aaKnown RBP6.12□□□□□ -1.43
TOPBP1-210ENST00000572787 USP17L7P0C7H9 530 aa6.12□□□□□ -1.43
TOPBP1-210ENST00000572787 EPB42P16452 691 aa6.12□□□□□ -1.43
TOPBP1-210ENST00000572787 SCP2P22307 547 aa6.12□□□□□ -1.43
TOPBP1-210ENST00000572787 EIF4A3P38919 411 aaKnown RBP6.12□□□□□ -1.43
TOPBP1-210ENST00000572787 DGKGP49619 791 aa6.12□□□□□ -1.43
TOPBP1-210ENST00000572787 ORC1Q13415 861 aa6.12□□□□□ -1.43
TOPBP1-210ENST00000572787 PDE1CQ14123 709 aaPredicted RBP6.12□□□□□ -1.43
TOPBP1-210ENST00000572787 C21orf62-AS1Q17RA5 79 aa6.12□□□□□ -1.43
TOPBP1-210ENST00000572787 ERFEQ4G0M1 354 aa6.12□□□□□ -1.43
TOPBP1-210ENST00000572787 COX20Q5RI15 118 aa6.12□□□□□ -1.43
TOPBP1-210ENST00000572787 USPL1Q5W0Q7 1092 aa6.12□□□□□ -1.43
TOPBP1-210ENST00000572787 PCNX4Q63HM2 1172 aa6.12□□□□□ -1.43
TOPBP1-210ENST00000572787 PPP4R3AQ6IN85 833 aa6.12□□□□□ -1.43
TOPBP1-210ENST00000572787 PODNQ7Z5L7 613 aa6.12□□□□□ -1.43
TOPBP1-210ENST00000572787 NECAB2Q7Z6G3 386 aa6.12□□□□□ -1.43
TOPBP1-210ENST00000572787 RNF180Q86T96 592 aa6.12□□□□□ -1.43
TOPBP1-210ENST00000572787 DZIP3Q86Y13 1208 aaKnown RBP6.12□□□□□ -1.43
TOPBP1-210ENST00000572787 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.12□□□□□ -1.43
TOPBP1-210ENST00000572787 RIN3Q8TB24 985 aa6.12□□□□□ -1.43
TOPBP1-210ENST00000572787 PI4K2BQ8TCG2 481 aa6.12□□□□□ -1.43
TOPBP1-210ENST00000572787 ATXN2LQ8WWM7 1075 aaKnown RBP6.12□□□□□ -1.43
TOPBP1-210ENST00000572787 CHMP4CQ96CF2 233 aa6.12□□□□□ -1.43
TOPBP1-210ENST00000572787 ELAC2Q9BQ52 826 aaKnown RBP6.12□□□□□ -1.43
TOPBP1-210ENST00000572787 SARGQ9BW04 601 aa6.12□□□□□ -1.43
TOPBP1-210ENST00000572787 OSBPL7Q9BZF2 842 aa6.12□□□□□ -1.43
TOPBP1-210ENST00000572787 PRDM11Q9NQV5 511 aa6.12□□□□□ -1.43
TOPBP1-210ENST00000572787 OBP2AQ9NY56 170 aa6.12□□□□□ -1.43
TOPBP1-210ENST00000572787 ACTR10Q9NZ32 417 aa6.12□□□□□ -1.43
TOPBP1-210ENST00000572787 PGAP2Q9UHJ9 254 aa6.12□□□□□ -1.43
TOPBP1-210ENST00000572787 MAPRE3Q9UPY8 281 aa6.12□□□□□ -1.43
TOPBP1-210ENST00000572787 VPS9D1Q9Y2B5 631 aa6.12□□□□□ -1.43
TOPBP1-210ENST00000572787 TRIM37O94972 964 aa6.11□□□□□ -1.43
TOPBP1-210ENST00000572787 PHKG2P15735 406 aa6.11□□□□□ -1.43
TOPBP1-210ENST00000572787 TYRP1P17643 537 aa6.11□□□□□ -1.43
TOPBP1-210ENST00000572787 DNM1Q05193 864 aaKnown RBP6.11□□□□□ -1.43
TOPBP1-210ENST00000572787 DDX10Q13206 875 aaKnown RBP6.11□□□□□ -1.43
TOPBP1-210ENST00000572787 BIRC3Q13489 604 aa6.11□□□□□ -1.43
TOPBP1-210ENST00000572787 KRT72Q14CN4 511 aa6.11□□□□□ -1.43
TOPBP1-210ENST00000572787 CXorf57Q6NSI4 855 aaKnown RBP6.11□□□□□ -1.43
TOPBP1-210ENST00000572787 THSD4Q6ZMP0 1018 aa6.11□□□□□ -1.43
TOPBP1-210ENST00000572787 TOGARAM2Q6ZUX3 1019 aa6.11□□□□□ -1.43
TOPBP1-210ENST00000572787 ZBTB46Q86UZ6 589 aa6.11□□□□□ -1.43
TOPBP1-210ENST00000572787 AFAP1L2Q8N4X5 818 aa6.11□□□□□ -1.43
TOPBP1-210ENST00000572787 RSPH1Q8WYR4 309 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms