RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 ATP8B2P98198 1209 aa25.65■■□□□ 1.7
CHMP6-204ENST00000572778 CDC37L1Q7L3B6 337 aa25.65■■□□□ 1.7
CHMP6-204ENST00000572778 COG6Q9Y2V7 657 aa25.65■■□□□ 1.7
CHMP6-204ENST00000572778 TMEM88BA6NKF7 163 aa25.64■■□□□ 1.7
CHMP6-204ENST00000572778 F8W031 263 aaPredicted RBP25.64■■□□□ 1.7
CHMP6-204ENST00000572778 MVPQ14764 893 aaKnown RBP25.64■■□□□ 1.7
CHMP6-204ENST00000572778 USP48Q86UV5 1035 aa25.64■■□□□ 1.7
CHMP6-204ENST00000572778 DNAJC5GQ8N7S2 189 aa25.64■■□□□ 1.7
CHMP6-204ENST00000572778 PSME4Q14997 1843 aa25.64■■□□□ 1.7
CHMP6-204ENST00000572778 ASTN2O75129 1339 aaPredicted RBP25.63■■□□□ 1.69
CHMP6-204ENST00000572778 FAM205AQ6ZU69 1335 aa25.63■■□□□ 1.69
CHMP6-204ENST00000572778 FKBP1AP62942 108 aaKnown RBP25.63■■□□□ 1.69
CHMP6-204ENST00000572778 CHAF1AQ13111 956 aaPredicted RBP25.63■■□□□ 1.69
CHMP6-204ENST00000572778 G3BP1Q13283 466 aaKnown RBP eCLIP25.63■■□□□ 1.69
CHMP6-204ENST00000572778 GGA3Q9NZ52 723 aa25.63■■□□□ 1.69
CHMP6-204ENST00000572778 MMP14P50281 582 aa25.62■■□□□ 1.69
CHMP6-204ENST00000572778 TFCP2Q12800 502 aa25.62■■□□□ 1.69
CHMP6-204ENST00000572778 KRT26Q7Z3Y9 468 aa25.62■■□□□ 1.69
CHMP6-204ENST00000572778 DDX19BQ9UMR2 479 aa25.62■■□□□ 1.69
CHMP6-204ENST00000572778 POLA2Q14181 598 aa25.61■■□□□ 1.69
CHMP6-204ENST00000572778 NBPF9Q3BBW0 867 aa25.61■■□□□ 1.69
CHMP6-204ENST00000572778 MFSD14BQ5SR56 506 aa25.61■■□□□ 1.69
CHMP6-204ENST00000572778 ANGEL2Q5VTE6 544 aaKnown RBP25.61■■□□□ 1.69
CHMP6-204ENST00000572778 SSH3Q8TE77 659 aa25.61■■□□□ 1.69
CHMP6-204ENST00000572778 KLRG1Q96E93 195 aa25.6■■□□□ 1.69
CHMP6-204ENST00000572778 AKAP2Q9Y2D5 859 aa25.6■■□□□ 1.69
CHMP6-204ENST00000572778 ADM5C9JUS6 153 aa25.59■■□□□ 1.69
CHMP6-204ENST00000572778 TIMM10P62072 90 aa25.59■■□□□ 1.69
CHMP6-204ENST00000572778 C20orf194Q5TEA3 1177 aa25.59■■□□□ 1.69
CHMP6-204ENST00000572778 DLK2Q6UY11 383 aa25.59■■□□□ 1.69
CHMP6-204ENST00000572778 SULF1Q8IWU6 871 aa25.59■■□□□ 1.69
CHMP6-204ENST00000572778 ZNF408Q9H9D4 720 aa25.59■■□□□ 1.69
CHMP6-204ENST00000572778 WNT10BO00744 389 aa25.58■■□□□ 1.69
CHMP6-204ENST00000572778 CELF2O95319 508 aaKnown RBP25.58■■□□□ 1.69
CHMP6-204ENST00000572778 OS9Q13438 667 aaPredicted RBP25.58■■□□□ 1.69
CHMP6-204ENST00000572778 PDE3AQ14432 1141 aa25.58■■□□□ 1.69
CHMP6-204ENST00000572778 CEP85Q6P2H3 762 aa25.58■■□□□ 1.69
CHMP6-204ENST00000572778 ABT1Q9ULW3 272 aaKnown RBP25.58■■□□□ 1.69
CHMP6-204ENST00000572778 SURF6O75683 361 aaKnown RBP25.57■■□□□ 1.68
CHMP6-204ENST00000572778 ADORA1P30542 326 aa25.57■■□□□ 1.68
CHMP6-204ENST00000572778 DLGAP5Q15398 846 aa25.57■■□□□ 1.68
CHMP6-204ENST00000572778 CST9Q5W186 159 aa25.57■■□□□ 1.68
CHMP6-204ENST00000572778 CHMP4BQ9H444 224 aaKnown RBP25.57■■□□□ 1.68
CHMP6-204ENST00000572778 GNL3LQ9NVN8 582 aaKnown RBP25.57■■□□□ 1.68
CHMP6-204ENST00000572778 MKRN1Q9UHC7 482 aaKnown RBP25.57■■□□□ 1.68
CHMP6-204ENST00000572778 ZNF646O15015 1829 aaPredicted RBP25.57■■□□□ 1.68
CHMP6-204ENST00000572778 CEP350Q5VT06 3117 aa25.56■■□□□ 1.68
CHMP6-204ENST00000572778 A0A1B0GUL7 405 aa25.56■■□□□ 1.68
CHMP6-204ENST00000572778 RBM5P52756 815 aaKnown RBP eCLIP25.56■■□□□ 1.68
CHMP6-204ENST00000572778 TBC1D22AQ8WUA7 517 aa25.56■■□□□ 1.68
CHMP6-204ENST00000572778 NEUROD6Q96NK8 337 aa25.56■■□□□ 1.68
CHMP6-204ENST00000572778 TTF2Q9UNY4 1162 aaKnown RBP25.56■■□□□ 1.68
CHMP6-204ENST00000572778 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.56■■□□□ 1.68
CHMP6-204ENST00000572778 ZBTB40Q9NUA8 1239 aa25.55■■□□□ 1.68
CHMP6-204ENST00000572778 PHKA1P46020 1223 aa25.54■■□□□ 1.68
CHMP6-204ENST00000572778 CFAP100Q494V2 611 aa25.54■■□□□ 1.68
CHMP6-204ENST00000572778 XAGE2Q96GT9 111 aa25.54■■□□□ 1.68
CHMP6-204ENST00000572778 ZBED3Q96IU2 234 aaPredicted RBP25.54■■□□□ 1.68
CHMP6-204ENST00000572778 SCAF8Q9UPN6 1271 aaKnown RBP25.54■■□□□ 1.68
CHMP6-204ENST00000572778 PCDHAC2Q9Y5I4 1007 aa25.54■■□□□ 1.68
CHMP6-204ENST00000572778 PITPNM2Q9BZ72 1349 aa25.54■■□□□ 1.68
CHMP6-204ENST00000572778 GRIK5Q16478 980 aa25.53■■□□□ 1.68
CHMP6-204ENST00000572778 CCDC102BQ68D86 513 aa25.53■■□□□ 1.68
CHMP6-204ENST00000572778 GORABQ5T7V8 394 aa25.52■■□□□ 1.68
CHMP6-204ENST00000572778 MTMR14Q8NCE2 650 aa25.52■■□□□ 1.68
CHMP6-204ENST00000572778 WDR66Q8TBY9 1149 aa25.52■■□□□ 1.68
CHMP6-204ENST00000572778 NOP58Q9Y2X3 529 aaKnown RBP25.52■■□□□ 1.68
CHMP6-204ENST00000572778 DEFB115Q30KQ5 88 aa25.51■■□□□ 1.67
CHMP6-204ENST00000572778 RPAP2Q8IXW5 612 aaPredicted RBP25.51■■□□□ 1.67
CHMP6-204ENST00000572778 DENND2AQ9ULE3 1009 aa25.51■■□□□ 1.67
CHMP6-204ENST00000572778 CNTNAP1P78357 1384 aa25.51■■□□□ 1.67
CHMP6-204ENST00000572778 SPDYE2BA6NHP3 402 aa25.5■■□□□ 1.67
CHMP6-204ENST00000572778 MYO1BO43795 1136 aa25.5■■□□□ 1.67
CHMP6-204ENST00000572778 SPDYE6P0CI01 402 aa25.5■■□□□ 1.67
CHMP6-204ENST00000572778 CDCA5Q96FF9 252 aa25.5■■□□□ 1.67
CHMP6-204ENST00000572778 PRMT6Q96LA8 375 aaPredicted RBP25.5■■□□□ 1.67
CHMP6-204ENST00000572778 SERPINA10Q9UK55 444 aa25.5■■□□□ 1.67
CHMP6-204ENST00000572778 TLL2Q9Y6L7 1015 aa25.5■■□□□ 1.67
CHMP6-204ENST00000572778 RASSF10A6NK89 507 aa25.49■■□□□ 1.67
CHMP6-204ENST00000572778 SEMA3EO15041 775 aa25.49■■□□□ 1.67
CHMP6-204ENST00000572778 PAXIP1Q6ZW49 1069 aaPredicted RBP25.49■■□□□ 1.67
CHMP6-204ENST00000572778 CLRN2A0PK11 232 aa25.48■■□□□ 1.67
CHMP6-204ENST00000572778 CRKP46108 304 aa25.48■■□□□ 1.67
CHMP6-204ENST00000572778 APOBEC3FQ8IUX4 373 aaKnown RBP25.48■■□□□ 1.67
CHMP6-204ENST00000572778 EXOC6BQ9Y2D4 811 aa25.48■■□□□ 1.67
CHMP6-204ENST00000572778 SUGT1Q9Y2Z0 365 aa25.48■■□□□ 1.67
CHMP6-204ENST00000572778 COL1A1P02452 1464 aaPredicted RBP25.47■■□□□ 1.67
CHMP6-204ENST00000572778 HMMRO75330 724 aa25.47■■□□□ 1.67
CHMP6-204ENST00000572778 RRP1P56182 461 aaKnown RBP25.47■■□□□ 1.67
CHMP6-204ENST00000572778 TNNI3KQ59H18 835 aa25.47■■□□□ 1.67
CHMP6-204ENST00000572778 PRAMEF18Q5VWM3 479 aa25.47■■□□□ 1.67
CHMP6-204ENST00000572778 GBA2Q9HCG7 927 aaPredicted RBP25.47■■□□□ 1.67
CHMP6-204ENST00000572778 GPR108Q9NPR9 543 aa25.47■■□□□ 1.67
CHMP6-204ENST00000572778 FPGT-TNNI3KV9GXZ4 949 aa25.47■■□□□ 1.67
CHMP6-204ENST00000572778 VEGFBP49765 207 aa25.46■■□□□ 1.67
CHMP6-204ENST00000572778 SAPCD2Q86UD0 394 aa25.46■■□□□ 1.67
CHMP6-204ENST00000572778 C2orf69Q8N8R5 385 aa25.46■■□□□ 1.67
CHMP6-204ENST00000572778 JMYQ8N9B5 988 aa25.46■■□□□ 1.67
CHMP6-204ENST00000572778 VEZTQ9HBM0 779 aa25.46■■□□□ 1.67
CHMP6-204ENST00000572778 MAST3O60307 1309 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms