RNA–Protein interactions for RNA: ENST00000571562.1

NPLOC4-205, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 301 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-205ENST00000571562 ENC1O14682 589 aa6.7□□□□□ -1.34
NPLOC4-205ENST00000571562 XRCC5P13010 732 aaKnown RBP6.7□□□□□ -1.34
NPLOC4-205ENST00000571562 ST13P50502 369 aaKnown RBP6.7□□□□□ -1.34
NPLOC4-205ENST00000571562 ZNF157P51786 506 aaPredicted RBP6.7□□□□□ -1.34
NPLOC4-205ENST00000571562 AFF1P51825 1210 aaKnown RBP6.7□□□□□ -1.34
NPLOC4-205ENST00000571562 MAP3K10Q02779 954 aa6.7□□□□□ -1.34
NPLOC4-205ENST00000571562 PTPN12Q05209 780 aaKnown RBP6.7□□□□□ -1.34
NPLOC4-205ENST00000571562 PCDH1Q08174 1060 aa6.7□□□□□ -1.34
NPLOC4-205ENST00000571562 RAD51AP2Q09MP3 1159 aa6.7□□□□□ -1.34
NPLOC4-205ENST00000571562 CCDC85BQ15834 202 aaPredicted RBP6.7□□□□□ -1.34
NPLOC4-205ENST00000571562 ZNF394Q53GI3 561 aa6.7□□□□□ -1.34
NPLOC4-205ENST00000571562 ZNF385CQ66K41 422 aaPredicted RBP6.7□□□□□ -1.34
NPLOC4-205ENST00000571562 KANK3Q6NY19 840 aa6.7□□□□□ -1.34
NPLOC4-205ENST00000571562 TREML4Q6UXN2 200 aa6.7□□□□□ -1.34
NPLOC4-205ENST00000571562 SVOPQ8N4V2 548 aa6.7□□□□□ -1.34
NPLOC4-205ENST00000571562 RNF34Q969K3 372 aa6.7□□□□□ -1.34
NPLOC4-205ENST00000571562 CLEC4MQ9H2X3 399 aaPredicted RBP6.7□□□□□ -1.34
NPLOC4-205ENST00000571562 LILRB5O75023 590 aa6.69□□□□□ -1.34
NPLOC4-205ENST00000571562 PAGE1O75459 146 aa6.69□□□□□ -1.34
NPLOC4-205ENST00000571562 ERCC5P28715 1186 aaPredicted RBP6.69□□□□□ -1.34
NPLOC4-205ENST00000571562 CDC27P30260 824 aa6.69□□□□□ -1.34
NPLOC4-205ENST00000571562 BAG6P46379 1132 aa6.69□□□□□ -1.34
NPLOC4-205ENST00000571562 DGKGP49619 791 aa6.69□□□□□ -1.34
NPLOC4-205ENST00000571562 MAP3K11Q16584 847 aa6.69□□□□□ -1.34
NPLOC4-205ENST00000571562 HGSNATQ68CP4 663 aa6.69□□□□□ -1.34
NPLOC4-205ENST00000571562 HS2ST1Q7LGA3 356 aa6.69□□□□□ -1.34
NPLOC4-205ENST00000571562 IL22RA1Q8N6P7 574 aa6.69□□□□□ -1.34
NPLOC4-205ENST00000571562 BTBD6Q96KE9 485 aa6.69□□□□□ -1.34
NPLOC4-205ENST00000571562 ADAM19Q9H013 955 aa6.69□□□□□ -1.34
NPLOC4-205ENST00000571562 COPRSQ9NQ92 184 aa6.69□□□□□ -1.34
NPLOC4-205ENST00000571562 PPP4R2Q9NY27 417 aa6.69□□□□□ -1.34
NPLOC4-205ENST00000571562 HOXB4P17483 251 aaPredicted RBP6.68□□□□□ -1.34
NPLOC4-205ENST00000571562 ERMP1Q7Z2K6 904 aa6.68□□□□□ -1.34
NPLOC4-205ENST00000571562 TTC9Q92623 222 aa6.68□□□□□ -1.34
NPLOC4-205ENST00000571562 CARD10Q9BWT7 1032 aa6.68□□□□□ -1.34
NPLOC4-205ENST00000571562 SEC31BQ9NQW1 1179 aa6.68□□□□□ -1.34
NPLOC4-205ENST00000571562 GGT7Q9UJ14 662 aa6.68□□□□□ -1.34
NPLOC4-205ENST00000571562 FAM177BA6PVY3 158 aa6.67□□□□□ -1.34
NPLOC4-205ENST00000571562 H3BRJ5 948 aa6.67□□□□□ -1.34
NPLOC4-205ENST00000571562 B3GALT4O96024 378 aa6.67□□□□□ -1.34
NPLOC4-205ENST00000571562 ESRRAP11474 423 aaPredicted RBP6.67□□□□□ -1.34
NPLOC4-205ENST00000571562 NID1P14543 1247 aa6.67□□□□□ -1.34
NPLOC4-205ENST00000571562 ZNF423Q2M1K9 1284 aa6.67□□□□□ -1.34
NPLOC4-205ENST00000571562 SLC7A3Q8WY07 619 aa6.67□□□□□ -1.34
NPLOC4-205ENST00000571562 NECAB3Q96P71 396 aaPredicted RBP6.67□□□□□ -1.34
NPLOC4-205ENST00000571562 KBTBD4Q9NVX7 518 aa6.67□□□□□ -1.34
NPLOC4-205ENST00000571562 LINC01387J3KSC0 135 aa6.66□□□□□ -1.34
NPLOC4-205ENST00000571562 COL9A3Q14050 684 aaPredicted RBP6.66□□□□□ -1.34
NPLOC4-205ENST00000571562 IKBKEQ14164 716 aa6.66□□□□□ -1.34
NPLOC4-205ENST00000571562 RPS26P11Q5JNZ5 115 aaPredicted RBP6.66□□□□□ -1.34
NPLOC4-205ENST00000571562 RASIP1Q5U651 963 aa6.66□□□□□ -1.34
NPLOC4-205ENST00000571562 USP48Q86UV5 1035 aa6.66□□□□□ -1.34
NPLOC4-205ENST00000571562 WFDC8Q8IUA0 241 aa6.66□□□□□ -1.34
NPLOC4-205ENST00000571562 ANKRD24Q8TF21 1146 aa6.66□□□□□ -1.34
NPLOC4-205ENST00000571562 NOC4LQ9BVI4 516 aaKnown RBP6.66□□□□□ -1.34
NPLOC4-205ENST00000571562 RRAGCQ9HB90 399 aa6.66□□□□□ -1.34
NPLOC4-205ENST00000571562 LRRC4BQ9NT99 713 aa6.66□□□□□ -1.34
NPLOC4-205ENST00000571562 LIG3P49916 1009 aa6.65□□□□□ -1.34
NPLOC4-205ENST00000571562 CABP4P57796 275 aa6.65□□□□□ -1.34
NPLOC4-205ENST00000571562 RACK1P63244 317 aaKnown RBP6.65□□□□□ -1.34
NPLOC4-205ENST00000571562 PCNX4Q63HM2 1172 aa6.65□□□□□ -1.34
NPLOC4-205ENST00000571562 SV2BQ7L1I2 683 aa6.65□□□□□ -1.34
NPLOC4-205ENST00000571562 NEDD1Q8NHV4 660 aa6.65□□□□□ -1.34
NPLOC4-205ENST00000571562 STK35Q8TDR2 534 aa6.65□□□□□ -1.34
NPLOC4-205ENST00000571562 CEP44Q9C0F1 390 aa6.65□□□□□ -1.34
NPLOC4-205ENST00000571562 TLR6Q9Y2C9 796 aa6.65□□□□□ -1.34
NPLOC4-205ENST00000571562 SOX1O00570 391 aaPredicted RBP6.64□□□□□ -1.35
NPLOC4-205ENST00000571562 TNNI2P48788 182 aa6.64□□□□□ -1.35
NPLOC4-205ENST00000571562 SNRPNP63162 240 aaKnown RBP6.64□□□□□ -1.35
NPLOC4-205ENST00000571562 MSL1Q68DK7 614 aa6.64□□□□□ -1.35
NPLOC4-205ENST00000571562 SULF2Q8IWU5 870 aa6.64□□□□□ -1.35
NPLOC4-205ENST00000571562 DMRTC2Q8IXT2 367 aaPredicted RBP6.64□□□□□ -1.35
NPLOC4-205ENST00000571562 TRIM11Q96F44 468 aa6.64□□□□□ -1.35
NPLOC4-205ENST00000571562 ACBD3Q9H3P7 528 aa6.64□□□□□ -1.35
NPLOC4-205ENST00000571562 CCSER2Q9H7U1 834 aa6.64□□□□□ -1.35
NPLOC4-205ENST00000571562 PRDM6Q9NQX0 595 aa6.64□□□□□ -1.35
NPLOC4-205ENST00000571562 TMEM39AQ9NV64 488 aa6.64□□□□□ -1.35
NPLOC4-205ENST00000571562 DDX41Q9UJV9 622 aaKnown RBP6.64□□□□□ -1.35
NPLOC4-205ENST00000571562 PPME1Q9Y570 386 aa6.64□□□□□ -1.35
NPLOC4-205ENST00000571562 LORP23490 312 aaPredicted RBP6.63□□□□□ -1.35
NPLOC4-205ENST00000571562 TTBK2Q6IQ55 1244 aa6.63□□□□□ -1.35
NPLOC4-205ENST00000571562 PHC3Q8NDX5 983 aa6.63□□□□□ -1.35
NPLOC4-205ENST00000571562 RHOVQ96L33 236 aa6.63□□□□□ -1.35
NPLOC4-205ENST00000571562 TGIF2Q9GZN2 237 aa6.63□□□□□ -1.35
NPLOC4-205ENST00000571562 ZFYVE1Q9HBF4 777 aa6.63□□□□□ -1.35
NPLOC4-205ENST00000571562 SRA1Q9HD15 236 aaKnown RBP6.63□□□□□ -1.35
NPLOC4-205ENST00000571562 FSCN2O14926 492 aa6.62□□□□□ -1.35
NPLOC4-205ENST00000571562 WIPF1O43516 503 aa6.62□□□□□ -1.35
NPLOC4-205ENST00000571562 DEAF1O75398 565 aaPredicted RBP6.62□□□□□ -1.35
NPLOC4-205ENST00000571562 ECEL1O95672 775 aa6.62□□□□□ -1.35
NPLOC4-205ENST00000571562 GBP2P32456 591 aaPredicted RBP6.62□□□□□ -1.35
NPLOC4-205ENST00000571562 PIP4K2BP78356 416 aa6.62□□□□□ -1.35
NPLOC4-205ENST00000571562 GSTM4Q03013 218 aa6.62□□□□□ -1.35
NPLOC4-205ENST00000571562 FAM160A1Q05DH4 1040 aa6.62□□□□□ -1.35
NPLOC4-205ENST00000571562 SETDB1Q15047 1291 aa6.62□□□□□ -1.35
NPLOC4-205ENST00000571562 GALNT11Q8NCW6 608 aa6.62□□□□□ -1.35
NPLOC4-205ENST00000571562 TINF2Q9BSI4 451 aa6.62□□□□□ -1.35
NPLOC4-205ENST00000571562 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.62□□□□□ -1.35
NPLOC4-205ENST00000571562 FAM229AH3BQW9 127 aa6.61□□□□□ -1.35
NPLOC4-205ENST00000571562 TM4SF5O14894 197 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 186.6 ms